Hippoglossus stenolepis (Pacific halibut): 118103559
Help
Entry
118103559 CDS
T08308
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04136
Autophagy - other
hsp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118103559 (atg13)
04136 Autophagy - other
118103559 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118103559 (atg13)
03029 Mitochondrial biogenesis [BR:
hsp03029
]
118103559 (atg13)
Membrane trafficking [BR:
hsp04131
]
Autophagy
Autophagosome formation proteins
ULK complex
118103559 (atg13)
Atg1 complex
118103559 (atg13)
Mitochondrial biogenesis [BR:
hsp03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
118103559 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
118103559
NCBI-ProteinID:
XP_035006526
LinkDB
All DBs
Position
24:complement(4993733..5001152)
Genome browser
AA seq
546 aa
AA seq
DB search
MDSDLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKSRLPHFEFEFNKCD
KDIKVSYTVYNRLSVLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLNGLGEGF
QTVRVGVVGTPVGTVTLSCAYRTNLAFMSSRQFERSAPIMGIIVDHFVDPPCGSQRPANM
GHPCNYRAPDDEDGGPYAGVQDSQEVCTTSFSTSPPSQCVCTLSPSPSKLPKPLPLDSLQ
LPLAPGLVTHTLYASRLSYHPPTLAGAADLCHPAANPNQVLHAVREGGVMLVPAYPHGTD
THLTAEHAPHTPGSSGDDDGLLHSDEGRSASPFDPVESLNAFTRKVGAFVSKPATQLTAA
SLDLPFAAFAPRGLDSEENDPMVQPPDSPPCPSPLQASLHSQGSEGSGQQDDFVMVDFRP
AFSKDDLLPMDLGTFYREFQNPPQLASLSLHISSQSMADDLDSLPEKLAVYEKNIDEFDA
FVDMLQ
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgacctaagtccccaggataaaaaggacttggacaagttcatcaagttcttt
gccttgaagactgttcaggtgatagtccaagcccgactcggtgagaaaatctgcactcgc
tcttcctcatcccctacaggctcagactggtttaatttggccatcaaagacataccagag
gtgactcatgaagccaagaaagcgctggcgggtcaacttccaggcatcggacgctccatg
tgtgtcgagatctccctgaagacatcagagggagactcaatggagttagagacttggtgc
ctggagatgaatgaaaagagcagacttcctcattttgaatttgagttcaataagtgcgat
aaagacatcaaggtgtcatatactgtgtacaaccgtctgtctgtgcttctgaagtctctg
ctggccatcaccagagtaacacccgcctataaactgtccagaaagcagggacatgactat
gtcatattatacaggatttattttggagaagtccagctgaatggattaggggaaggtttt
cagacagtgcgtgttggtgtcgttggaacccctgttggcacagtcacactttcatgtgcc
taccgcaccaacctggcatttatgtccagcaggcagtttgagcgctccgctccgatcatg
ggcattatcgtggatcactttgtggatcctccctgcggcagccagcgtcctgcaaatatg
ggtcacccctgcaactacagagctccagatgatgaggacggaggaccgtatgcaggagtt
caggattcacaggaggtctgcaccacctccttctccacctcccctccctctcagtgtgtg
tgcacactgagtccgtctccctctaaactgcccaagcccctccctctggacagtctgcag
cttccattggctcccggacttgtcactcacactctttatgcttccagattatcctaccat
cctccaactctagcaggagctgctgatctttgtcaccccgctgccaatcctaaccaggta
ttgcatgctgtgagggagggcggggttatgctggttcctgcctatcctcatggaacagac
acccacctgacagccgagcacgccccccacacccctggcagcagcggtgatgacgacggt
ctgttgcacagcgatgaagggaggagtgcttctccctttgacccggtggagtctctcaac
gcgttcacgaggaaagtcggagcgtttgtcagtaaacccgccacacagttaacagcagcc
agtctggacctgccatttgctgcattcgctcctcgaggcctggactcggaggagaatgat
cccatggtgcagcccccagactcccctccctgcccgtcccccctgcaggccagccttcac
tctcagggctcggagggatcggggcagcaggacgatttcgttatggtcgactttagacct
gccttctctaaagacgacctgttgccgatggatttgggcaccttctacagagagtttcaa
aatcctccacaactggccagtctctctctacacatcagctcgcagtcgatggccgatgac
ctggactctctgccagagaaactggcagtctacgagaaaaacatcgacgagttcgacgct
tttgtggacatgctccagtag
DBGET
integrated database retrieval system
