Hippoglossus stenolepis (Pacific halibut): 118103595
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Entry
118103595 CDS
T08308
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04080
Neuroactive ligand-receptor interaction
hsp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118103595
04082 Neuroactive ligand signaling
118103595
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsp04040
]
118103595
Ion channels [BR:
hsp04040
]
Ligand-gated channels
GABA-A
118103595
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Ortholog
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF7205
Motif
Other DBs
NCBI-GeneID:
118103595
NCBI-ProteinID:
XP_035006571
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Position
24:complement(4247785..4268255)
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AA seq
467 aa
AA seq
DB search
MDLHSAPNKKVSRIPVMARLVLLLLLLCGCQNSLCSTSLEAQKEASANDNSTVFTRILDG
LLDGYDNRLRPGLGENVTEIKTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDERLCFKGPM
ERLPLNNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLRDDGTLLYTMRLTISAECPM
QLEDFPMDAHACPLKFGSYAYPVSEVVYTWTEGAAKSVVVAEDGSRLNQYHLIGQTAGTE
DIHTSRGQYTVMMAHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPARTVFGVT
TVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWDGKK
ALEAQHPKKRDPMVLSKKPNNVCSAGVNYTPNLTKDVSISTISNTTSVQLRTSETKLVDP
KKTYNSVSKIDKMSRIVFPVLFGTFNLVYWATYLNREPVVKGVVSST
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggatctgcattcagctccaaacaagaaagtgagcagaattccagtcatggccagactc
gtgctcctcctgctgctgctgtgtggctgccagaacagcctctgctcgacctccttggag
gctcagaaggaggcgagcgccaacgacaacagcacggttttcaccaggatcctggacggg
ctcctggacggctacgacaaccggctccggccggggctcggagagaacgtcaccgagatc
aagaccaatattttcgtcaccagcttcggcccggtgtctgacacggagatggaatacacc
atcgacgtcttcttccgtcagagctggaaggacgagcgcctgtgcttcaaggggcccatg
gagcggctgccgctgaacaacctgctcgccagcaacatctggaccccggacaccttcttc
ctgaacggcaagaagtccatcgcccacaacatgaccacccccaacaagctgctgaggctg
agggacgacggcactttgctctacaccatgagactgaccatatcagcagaatgccccatg
cagctggaggatttccccatggacgcacacgcctgccctctcaagtttggcagctatgcc
tatccagtgtcagaggtggtctacacttggactgagggagcggcaaagtctgtggtggtg
gcagaggacggctccagactcaaccagtaccacctgattgggcagactgccggcacagag
gacatacacacgagcagaggacagtacacagtgatgatggcccacttctacctgaagagg
aagattggctattttgtcatccagacgtacatgccctgtttcatgacagtaatcctgtcc
caggtctcattttggctaaaccgagaatcggttcctgcgaggaccgtctttggggtgacc
acggtcctgaccatgaccaccctcagcatcagcgccaggaactcgctccccaaagtggcc
tacgccacagccatggactggttcatcgccgtgtgctacgcgttcgtcttctctgccctc
atcgagttcgccacggtgaactacttcaccaagaggagctgggcctgggacggcaagaag
gctctggaagcgcagcacccgaagaaacgagatcccatggtgctttccaaaaagcccaac
aacgtttgctcggccggcgtcaactacacccccaacctcaccaaggacgtgtccatctcc
accatctccaacacgacgtcggtgcagctccggacctccgagaccaagctggtggacccc
aagaagacctacaacagcgtcagcaagatcgacaagatgtcgcggatagtgttccccgtc
ctgtttggaaccttcaacctcgtctactgggccacgtacctcaacagggaaccagtggtg
aaaggagttgtcagctcaacgtaa
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