Hippoglossus stenolepis (Pacific halibut): 118103652
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Entry
118103652 CDS
T08308
Name
(RefSeq) BCL-6 corepressor
KO
K23215
bcl-6 corepressor
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
118103652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsp03036
]
118103652
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
118103652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUFD
Ank_2
Ank
BCOR
Ank_3
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
118103652
NCBI-ProteinID:
XP_035006690
LinkDB
All DBs
Position
24:complement(153757..179287)
Genome browser
AA seq
2241 aa
AA seq
DB search
MNPVADLSIDCNTLVGENLRPHGGIFYPGIHPLSAEKPRESGTSLPLGYNLLYRPNVTLL
NGQKPANEYVGVYKNPPPLVVPATGAEGLGPDHRVPPSDKQSELGLNGAGNFLRLPWISP
YADAAMYPFLDMAYKASFLSQPSTFIHQQLAYQSLCAAGAGSSTAGEDRHFYLPHYAPTH
ITSPLDPQIRIPKATPAPAVLVPIPHCQDKALQGIGPQVQKEPFSTSPKIRQEPEPHPTE
QLHGSSNSGAKSSQASSCKSSSSESSTAPVSSSASTAAIELPPVNRPPCSVPQSLGNSST
DLQKSTYRNTSSTSRSVSHPFYRASLSSEHCSPTYSGSNKTKGAGSDRCSEEKCVSPAQT
SLDTAVPHKTAERPLDLSAKELKGFANGFPSKLEALAKLGYSPPSHYELLDNQGQHLKEG
LPRPVSTSANSPNCPEIISTAPSSWVVPGPSSAVGSDHSRGSQIIKNKNKPQSSPHTKVE
MSSSPSPASGGRSSAMSPSPKSKVEWPQAPNNDLDKGPPNSKVETPTCCGKQIITPAKLE
AQKTQPLLHQQPLVVNTSCQIFGESYLPPGLGYTNRYIPYSVAENMSLQRISIPGKGSVY
SHPVLLSNSSFYPPHTVRKQSLPYGVHPYQNSQELAPTTMSCYPGLNTKDRLDNRSKTQD
KPWSAEPYRNQERPDADSSHKSDNEKDKFTNQNMKTSGKNLTAIKDDVVCIDPVRDETDD
DLSTNKLSSSAIGVENSIKPGSSGCIHIQENKPQPPKFLPSEQAAEMRQGSLLQTSQPKP
PHNHSASSLLAKEEIPEGEETLSPFSDIPEEQTMRCARTCPRQFSRKCKSLWWCWGPGEG
GTSFGNNGADGKSASNGVQSEGLSREKVDPEQSSSKKSNLSVPVGEVNSSSDNNNSNLIV
GEVCTVTQTESPVYGATSHADGAVCTSKAPACRDFSPQVPVCSTFDPREAAGGVMNTRTS
LCVHNPRAPTCKGGDENSTNFVQRNFIGPCCRNLRAPTFTGNTNPVAPNCMTVNPQFANC
EKHNAVHQAYRNNNVGVLACKGRSYGDYQTCVNNNLRGSTYGNYFPRSPTYRHFSPGNPT
NGGFNRMLTNLTQELPVNRDLKYEGFSSNETPNSALTFTSSGDGRKEIQDSMDPLVDEDK
GPSCSKNQRSGLTKRIANSSGYLGDRFKCVTAELYADSSQLSREQKAIQRAMLRFSELEL
KEKEGGGEEEEERGMTAAAVATGEKELAGGQRGDGGREEVEEEGKKKEGGGWEGCQKSEG
RRGGGERSRSAAAAATEAPRGSQINCRHSHVPILSPPCRPSNGLAVLREDEETRRREEEE
GLQEERKKQERSFVSQPELQQQRFLPTARSLFQGNTPMPTSAPGGSNPGTVINRRRMFSL
EPFHQSSIINSRLKRGREEERAEERAGIKKTKFTTNSTSDVKKLKVYIELDGLRLNKPLP
HREHGERSAEVTRKFRMDVLAVRGRSKVNGGWGDPALVRRDGPRVSHVAPPSSPTHLPRQ
PAPASLSSVTSSRLQDKHQKLRESRRLTAFHQSLLPPPPCSTSPDPHPFRCHDDLDRPKG
KRPCKTKHMGGAMAREEEERHEGGRDNVEEKNRRVSPSDSCCSPSHRPPSPQNTLCARPA
PPEMRRLIVNKNAGETLLQRAARLGYEEVVLYCLERRLCDVNHRDHAGYCALHEACARGW
LGIVRHLVEHEANVNCSAQDGTRPLHDAVENDHMEVVRFLLACGADPTLTSYSGRGPINM
THSAAMETFLEEYLCDLQGRSEGDQGTYWEFYGSSVCEPPSGGGVYNILADPPGPEDEEE
EEEEEGEDEEQHSRREVFEFELSDRPLLPCYNIQVLLSQGPRNWLLFADVLGRLRMTSRS
FRRLFPQINVQSVPEDEFYRQASLSQLLTGPDERELVSFRPDVKDPLELVEATPELAGML
GSSLEFIESRWDSLSASPPPTPPPSPSVTFSCVPVLLPPQPQGAIEGNMLHNRTQSIESR
GLKKLVFSAAKTETKEDANTWETQQHGSKHVVGPSPTKTNITSNARMWELQGLRSKNTGV
INSDGKMDANMWEQRPGGTITAVASVKSDKMGGANMWEPQRLRTRNPVSSDSALSQPRRL
RNIGTENTNSSDSNVAADANTWKRLNQRSKTNSVSDSTDQDASLDGSFWEPQRLRSKNAA
NSIPATADTNLWERHGIKRVGGNICDAQLANSIKMDTALQRNLGNVRVHIRDLGMKVAAV
HRDLKNEREKVVNKSGVKVRS
NT seq
6726 nt
NT seq
+upstream
nt +downstream
nt
atgaacccggtcgctgacctcagcattgactgcaacactctggtgggggagaacctccgc
ccccatggagggattttctatcctggcatccatcctctttcagctgaaaaaccccgggag
tctggaacttctctcccactgggctacaatcttctgtacagacctaatgtaaccctgctg
aatggccagaagccggcaaacgaatatgttggagtttataagaacccaccacctctggtt
gttcctgctacaggagctgaaggcctggggccagaccacagggttccacccagtgataaa
cagtcagaactgggcctgaatggtgctggaaacttcctgagattgccctggatcagccct
tatgctgatgctgcaatgtacccattcttagacatggcatacaaggcctctttcctgtcc
cagccatcgaccttcatccaccagcagctggcatatcagtctttgtgtgccgctggggca
ggaagcagcacagccggggaagacagacatttctaccttcctcattatgccccaacccat
atcacatctccactggaccctcaaatcaggatccctaaggccacccctgctcctgctgtc
ctggtacccatcccccactgccaggataaagccttgcaaggaattggtcctcaggtacaa
aaggaacccttcagcaccagtccaaagatccgccaggagcccgagcctcaccctactgag
caactacatggcagcagtaacagtggtgcaaagtccagtcaggcttcatcttgcaagagt
agcagtagtgaaagtagcactgcccctgttagcagttcagctagcactgctgcgatagag
ttacccccagttaaccgtcctccatgttcagttcctcaatccctcggaaactccagtaca
gatctccagaagtccacttacagaaacacctcatcaacttcacgctcagtctctcacccc
ttttacagggctagcctgagctctgagcactgctctcccacgtactcaggcagcaacaaa
accaaaggtgccggctcagaccgctgtagtgaagagaagtgtgtatcccctgcacagaca
tcactggacacagctgtgcctcataaaactgccgaaagacctttggatctgtctgccaaa
gagttgaaaggttttgcaaatggtttcccgtccaaattagaggccctggccaaattgggg
tattcaccaccatctcattatgagctgctggacaaccagggccagcacttaaaagagggt
ctgccccgaccggttagcacatcagcaaactctccaaattgtcctgaaattatcagtact
gcaccctcctcttgggtggtcccgggtccttcctcagctgtcggctcagaccacagcaga
ggctcccaaataataaaaaacaaaaacaagcctcaaagttctcctcacacaaaagtagag
atgagcagcagtcccagtcctgcctcagggggaagatcttctgcaatgtccccttcccca
aaatccaaagttgaatggccacaagcccctaataatgatttggataaaggccctccaaac
agcaaagtagaaactcccacatgctgtggaaaacagatcataactcctgctaagttagag
gctcagaagacacaacctcttctgcatcagcagcctcttgtggttaacacctcttgtcaa
atctttggtgagtcctacctccctcctggcttaggttacaccaaccgttacatcccatat
tcggttgctgagaatatgtccctgcaacgcatttccataccaggcaaaggatctgtctac
tcccacccagtcctgctcagcaacagtagcttttacccgccacacactgtacgaaagcaa
agtctaccatatggagtacatccatatcagaattcccaggaattggctccaacaaccatg
tcgtgctacccaggtcttaacaccaaagaccgacttgacaacagatctaaaactcaggat
aaaccctggagtgcagaaccatataggaaccaggaaaggccagatgctgacagctcccac
aagagtgacaatgaaaaagacaagttcacaaatcaaaacatgaagacttcaggaaaaaac
ctcacggctatcaaagatgacgtagtttgtatcgaccccgtgcgtgatgagacagatgat
gatttgtccaccaacaaactcagctcctcagctatcggcgtagagaattccatcaaacca
gggagcagtgggtgtatccacattcaagaaaacaagccacagcctcctaagttcctccct
tctgaacaagctgcagagatgaggcaaggctcactactccagacttcccaaccaaaacct
cctcataaccactctgcttcatctcttcttgctaaagaggagatcccagaaggagaagaa
acacttagcccattctcggacatcccagaggagcagaccatgcgctgtgcccgaacttgt
cctcggcagttttctagaaaatgtaaaagcctctggtggtgctggggacctggtgagggg
ggaactagttttgggaataatggtgctgatggaaagagtgcaagtaatggagttcagtca
gaaggcctgagcagggaaaaggttgatcctgagcaaagctcgtcaaagaagagtaactta
tcagttcctgttggtgaagtaaattcttccagtgacaataacaattctaacctcatcgtg
ggagaagtgtgtacagtcacccagaccgagagtccagtttatggagctacttctcatgca
gacggtgcagtttgcaccagtaaagcaccagcatgtagagatttcagtccccaggttcca
gtttgcagcactttcgatcccagggaggcagctggaggagtcatgaacaccaggacctca
ctttgtgtccacaacccaagagctcccacttgtaagggcggagatgaaaacagtacaaat
tttgtccagaggaattttattggtccgtgttgcagaaatctgagggctccaacttttact
ggaaatacaaacccagtggctccaaactgcatgactgtcaatccccagtttgcaaattgt
gaaaagcacaatgcagtgcaccaagcttacagaaacaacaatgttggggttcttgcatgt
aagggccggtcttatggagattaccagacctgtgtaaataacaatctcaggggctcaaca
tatggaaactattttcctcggagcccaacctataggcacttttcacctggtaatccaacc
aatggaggctttaacaggatgctgactaatttgactcaagagctgccagttaacagagac
cttaaatatgaaggcttttcctccaatgagacgccaaactcagctctcaccttcaccagc
agtggagatgggaggaaggaaatccaggacagcatggatccactagttgatgaggataaa
ggccccagctgcagcaagaatcaacgctcgggcctcaccaagcgcatcgccaattcttct
ggctacttgggcgaccgctttaaatgtgtgacggctgagctttacgccgattccagccag
ctgagcagagagcagaaagcgatccagcgagcgatgctgcgtttctctgagctggagctg
aaagagaaagagggaggaggagaagaagaggaagaacgagggatgaccgcagcagcagtg
gcgacaggggagaaggagctggcaggcggccagcgaggagatggagggagggaggaagtg
gaggaggaggggaagaagaaagagggaggagggtgggagggctgccagaaaagtgaaggg
cggcgaggaggaggagaaagaagtcgctctgcagccgccgccgccaccgaggctccgaga
ggttctcagataaactgccgtcacagccatgtccccatcctgtctccaccgtgtcgcccg
tccaacggcctcgccgtcctccgagaggatgaggagacgaggaggagagaagaagaagag
ggtctgcaggaggagaggaagaaacaggagaggagttttgtttcacagccagaactacaa
caacaaaggtttctacccacagccaggagtctgttccagggaaacacccccatgccgaca
tccgcgcccggtggttcgaatcccggcacggtgataaaccgcaggcgaatgttcagcctg
gagccttttcatcagagcagcatcatcaacagccgactgaagagagggagggaggaggag
agggcggaggagagggcgggaatcaagaaaaccaagttcaccaccaactcgacctcagac
gtaaaaaaactgaaggtttacatcgagctcgacggcctcagactcaacaagcccctccca
cacagggagcacggcgagaggtcagcagaggtcaccaggaagttcagaatggacgtcctg
gccgtcagagggaggtcaaaggtcaacggaggctggggcgaccccgcacttgtgaggagg
gacggcccgagagtttcccatgtggcaccgccctcctctcccacccatctcccccggcaa
ccagcccctgcatccctgtcctccgtcacctcctctcgcctccaggacaaacatcagaag
ctgagggagagtcgcaggctcacagctttccaccagtccttacttcctcctcctccatgc
tccacctcacctgacccccatcccttccgctgccatgacgacctcgacaggccgaagggc
aagcgaccctgcaagacgaaacacatgggaggagccatggccagggaggaggaggagaga
catgaaggagggagggacaacgttgaggagaaaaataggagggtttctccatctgactca
tgttgctcgcccagccacagacctccctctccgcagaacacactctgcgcccggccagcc
cctccggagatgcgtcggctcattgtgaacaaaaatgctggagagactctgcttcagcgc
gccgcccgcctgggatacgaggaggtggtgctgtactgtctggagaggcgactctgcgac
gttaaccatcgagaccacgccgggtactgcgccctgcacgaagcctgtgcacgtggctgg
ctggggatcgtgcgtcacctggtggagcacgaagccaacgtcaactgcagcgctcaggat
ggaaccaggccgctgcacgacgccgttgagaacgaccacatggaggtggtgcgcttcctg
ctggcctgtggcgccgaccccaccctcacctcctactccggacgagggccaatcaacatg
acccacagcgctgccatggaaaccttcctggaggaatatctctgtgacctccagggaagg
tcggagggcgaccagggaacgtactgggagttttacggcagctcggtgtgcgagccaccc
agtggcggaggagtgtataacatcctggctgatccaccagggccagaggacgaagaagag
gaggaggaagaggagggtgaggatgaggagcaacattcacgaagggaggtgtttgagttc
gaactgtccgaccgaccactgctgccctgctacaacatccaggtgttgttgtcacaggga
cccaggaactggcttctcttcgccgatgtcttaggtcgccttcggatgacgtcacggtct
ttccggcgtctcttccctcagatcaacgtacagtccgtccctgaagacgagttctaccga
caggcgtctctgtcgcagctgctgacgggtcctgacgagcgggagttggtctcgttcagg
ccggacgtcaaagaccctctggagctggtggaggccacgcccgagctcgctggcatgcta
ggctcctccctggagttcattgaaagtcgctgggactcgcttagcgcttcgccacctccg
acgccaccgccatcaccctcagtgacattttcctgtgttccagtgttattacctccgcag
ccacagggggcgatagagggaaacatgttgcacaacaggacccagtcgatagaaagtcga
ggactgaagaagttggtgttttctgctgctaaaacagaaactaaagaagatgctaacacg
tgggaaacacaacaacatggaagtaaacatgtcgtaggtccttctccaacaaagacgaac
attacgtccaacgcgcgcatgtgggaactgcaaggattacgaagtaagaacactggtgtc
attaactctgacggtaagatggacgctaacatgtgggaacaacgaccaggaggaacaatt
acagcagtggcttccgtgaagtctgacaaaatgggtggagctaacatgtgggaacctcag
cgactccgaactaggaaccctgtgagttctgactccgccctgtcacaacctcggcgactg
cggaatataggcactgaaaatactaactcttcagattcaaatgttgcagctgacgctaac
acatggaaacgactaaatcaacgaagtaagaccaacagcgtttctgattctacagatcaa
gatgcttcactggacggaagcttctgggaaccacaacgactgcgaagtaagaacgccgca
aatagtatcccagcgacagcagacacaaacctttgggaacgacacggaataaagagagtg
ggtggaaacatctgtgatgctcagttagctaatagcatcaagatggacaccgccttgcaa
aggaacctgggtaacgttcgagtccacatcagggacctggggatgaaggtcgccgccgtc
cacagagacctgaagaacgagcgggagaaagtcgtgaataagagcggagttaaagtacga
tcgtga
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