Hippoglossus stenolepis (Pacific halibut): 118103692
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Entry
118103692 CDS
T08308
Symbol
mars1
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic isoform X1
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp00450
Selenocompound metabolism
hsp00970
Aminoacyl-tRNA biosynthesis
hsp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
118103692 (mars1)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
118103692 (mars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hsp01007
]
118103692 (mars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsp03016
]
118103692 (mars1)
Enzymes [BR:
hsp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
118103692 (mars1)
Amino acid related enzymes [BR:
hsp01007
]
Aminoacyl-tRNA synthetase
Class I (U)
118103692 (mars1)
Transfer RNA biogenesis [BR:
hsp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
118103692 (mars1)
Prokaryotic type
Other AARSs
118103692 (mars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
GST_N_5
Anticodon_3
WHEP-TRS
tRNA-synt_1
GST_C_3
GST_C
GST_N_3
GST_C_2
GST_N_2
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
118103692
NCBI-ProteinID:
XP_035006746
LinkDB
All DBs
Position
3:10642310..10657562
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AA seq
928 aa
AA seq
DB search
MKLFLSEGNPHCLKVLAAVQVTGVPCDVQYVNHEETVVPFLSRPTLPALILPSGWHLFSS
NAICQYLYEVKGQDSTDLCNQWLEWEATDLQPALLQALHMAVLQGKASEVSQVLQAPLNY
LDQGLTKGNTPYLTGEAVSVADVVLWAALYPLLSDSSLALGERKSVKAWFDRMAEMHGCQ
SAAQKVLQGKGLQGMKSYMQRQPARQSNQCRDAQPCNSSPAECEEGERVVSEEEMEAAAL
TWSTGLKDSPQVTDRQHPILPQEGKRNILVASALPYVNNVPHLGNIIGCVLSADVFSRYA
RLRDWNLLYVCGTDEYGTATENKAREEGLTPQQICDKYHAVHADIYKWFQIDFDFFGRTT
TEKQTEIAQNIFWRLHKHGFLLEDTVEQLRCEKCQRFLADRFVEGICPYCSYPEARGDQC
DKCGRLINAVELREPQCKVCGQTPVVCSSKHLFLDLPKLEAQLEQWLDKSMSTGDWTQNA
KQITRSWLRDGLKPRCITRDLKWGSPVPHPDFKEKVFYVWFDAPIGYLSITANYTDQWEK
WWKNPSQVELYNFMAKDNVPFHSVVFPCSLLGAQDNYTLVNHLVATEYLNYEDTKFSKSR
GTGVFGDMAKDTGIPSDVWRFYLLFVRPEGQDSAFSWADMALKNNSELLNNLGNFINRAG
MFVTKFFEGCVPAMELQQEDKKLLALVSWELQQYIQLMDKVKIRDALKLILNISRHGNQY
IQVNEPWKNIKGGDAERQRAGTVTGVSVNIACLLSVMLLPYMPTVSQTIRDQLNAPQSGL
HTMFQGTGTFVCSLRAGHRIGNVSPLFQKLEPDQIEALKKKFGGQQPEDEPPQKKKTAES
AASSQPAAVPAPAAAEATATVSGADPEKAKLLTQAVTEQGEKVRALKAQKAEKAAITAEV
AKLLDLKKQLAVAEGKNPEPAPQKSKKK
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtttttaagcgaaggcaacccgcactgcctgaaggtgttagccgccgtacag
gtgaccggggtcccgtgtgacgtccagtatgtcaaccacgaggagacagtggtgcccttt
cttagccgtccaactctgccagccctcatcctgcccagtggatggcacctcttcagctct
aatgccatctgccaatacctctatgaagtaaaaggacaagactccactgacctttgcaac
cagtggctggaatgggaggccacagatctccagcctgcactgcttcaggctcttcacatg
gcagtgctgcaaggaaaggcttcagaagtgtctcaggttctccaggcgcccctaaactac
ttggaccaaggcttgactaagggaaacacgccatatttaacaggggaagctgtctctgtt
gctgatgttgttttgtgggctgcgctgtaccctcttttatctgactcgtcactcgcactg
ggtgaacgcaagtctgtgaaggcctggtttgaccgaatggctgagatgcacggttgccag
tctgctgctcagaaagtgctgcaggggaaaggcctgcagggcatgaagagctacatgcag
agacagcctgcccgtcagagcaaccagtgcagagacgcacagccatgcaatagcagccct
gctgagtgtgaagagggagaacgtgtggtttctgaagaggagatggaagctgctgctctc
acctggagcactggtttgaaagacagcccacaggttacagacagacaacaccccattttg
ccacaggagggcaaacgaaacatcctggtggccagtgccttgccttatgtcaacaatgtc
ccccacttgggtaacatcattggttgtgtcctcagcgctgacgtcttctccaggtacgct
cgtctgcgagactggaacctgctgtatgtgtgtggcacggacgagtacggcacagcgacg
gagaacaaggccagagaggagggcctgacaccgcagcagatctgcgacaagtaccatgct
gttcacgccgacatttacaagtggttccagattgactttgactttttcggcagaaccacc
actgagaagcagacagagattgctcagaatatattctggcgactccacaaacacgggttc
ctgctggaagacacggtggagcaactgcgttgtgagaagtgtcagcgttttctggctgac
cgcttcgtagaaggcatttgtccttactgcagctacccagaagctcgcggtgatcagtgt
gacaagtgcgggcggctcataaatgcagtggagctcagggaaccccaatgtaaggtctgt
gggcagactccagtcgtctgctcctccaaacatcttttcctcgacctgccaaagctggag
gctcagttggagcagtggctggacaagtcgatgagcacaggagactggactcaaaacgcc
aaacagatcactcgctcctggctgagagatggactcaaaccacgctgcatcaccagagac
ctgaagtggggaagcccagtgcctcaccccgactttaaagagaaggtcttctacgtgtgg
tttgatgcaccgattggttacctgtccattaccgccaactacaccgaccaatgggagaag
tggtggaagaatcccagtcaggtggagctgtataacttcatggccaaagacaacgtgcca
ttccacagtgtagtattcccctgctccctactgggagctcaagacaactacactctggtc
aaccacctcgttgccaccgaatatctgaattacgaggacactaaattctccaagagtcgt
ggcactggcgtgtttggagacatggctaaagacacgggcatcccatccgacgtgtggcga
ttctatctgctgtttgtgcgtccagagggacaggattcagccttctcctgggccgacatg
gctctgaagaacaactccgagctgctcaacaacttgggcaacttcatcaacagagccggc
atgtttgtcactaagttctttgagggctgtgtgcctgcgatggagctgcagcaggaagat
aagaagctgctggccctggtgagctgggagctgcagcagtacatccagctcatggacaaa
gtcaaaattcgtgatgctctcaaactcatcctgaacatctctcgccatggcaaccagtac
attcaggtcaacgaaccctggaagaacatcaagggaggagacgcagaaaggcagcgtgcg
ggcacagtcactggcgtctctgtgaatatcgcttgcctgctgtcagtgatgctgttacct
tacatgccaacagtgagccaaaccatcagggatcagctcaacgcccctcagtccggcctc
cataccatgttccaaggcactggcacctttgtctgttccctgagagcgggccaccgcatc
ggcaatgtcagtccgttgttccagaaactggagccggaccagattgaggctttgaagaag
aaatttggtggacagcagcctgaagatgaaccacctcaaaaaaagaagacagctgagagc
gctgccagctcgcagccggccgctgtgccagctcctgctgctgctgaggcgacggcgacg
gtgagcggagcggacccagagaaagccaagctgctcactcaggctgtgactgagcaggga
gaaaaggtgcgagcgctgaaagcccagaaggcggagaaggctgcgatcacagcagaagtg
gccaaactgttggaccttaagaaacagctggctgtggctgaggggaagaaccctgagccg
gcacctcagaagagcaagaagaagtga
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