Hippoglossus stenolepis (Pacific halibut): 118104030
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Entry
118104030 CDS
T08308
Symbol
taf1b
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsp03021
]
118104030 (taf1b)
Transcription machinery [BR:
hsp03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
118104030 (taf1b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
DUF5816
Importin_rep_4
Motif
Other DBs
NCBI-GeneID:
118104030
NCBI-ProteinID:
XP_035006980
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Position
20:complement(20888032..20897336)
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AA seq
572 aa
AA seq
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MDEELTAGFTELCAQCSAVDWGISDEGRFYCRSCHNVIERTKEVVDTTFTPGSTRISTIG
RGTRRRKADRGRQWMICEGFQFILRNQADALLRLGVSAHFKDQVLCQLWRLYLQKSRQAF
TNTPVRSSRFKLQRPGSDSDSVAESSAASASETDGETNLSSTAASNAAESCTDWPQRWGS
SDVVTYLTARQRRSRGLMNMPKTLALIHLALLWSREPLTLSDLLRLVNGGHVPYVNAFEE
LPEEMKLDGKDALIFRVESVPSHRLVQRQAQTLLLFLQLPTFPPISRQSLLHPALLSLRY
LADANLPDDLHPWVCRLMHDAGLGDFTLDPTSCPVLPQYDIQTAAVIVVTMKLIFGLDDH
TEWDLSDESGVQDDSESMFNLRRWFRLTQAALIAAQQKRHHDVARKQWKAKKPLYPSRDL
KAVVMKRKRTAEQVQMCFEKLSSRPVGVQRCGPSSFIFCWGDEDGADGPSLHHQKLDRVL
TLKHNVQTLSNTAYWHTALRVCDPKKCRSHYLEVEATLPRSFVWLLQLFSFLLNVKPANL
YEEVLKVERRVLDRRHLRRKGRTTRSEDMIVS
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaacttacggccggcttcacggagctgtgtgcgcagtgctccgcggtggac
tgggggatttcagacgagggtcggttctactgcagatcctgccacaacgtcatcgagaga
accaaagaggtggtggacacgaccttcacccccggctccaccagaatctccactatcggc
agagggacgagacgcaggaaagcagatcgtggtcgtcagtggatgatctgtgaaggtttt
cagttcatcctgaggaaccaggccgacgctctgctccgactcggagtctctgctcacttc
aaggaccaggtgttgtgtcagctgtggagactttacctgcagaagagtcgacaagcgttc
accaacaccccagtgaggagctctcggtttaaactgcaacgtccaggatccgactccgac
agtgtagctgagtcgtctgctgcttcggccagtgagacggacggagagaccaacctgtcc
agcaccgccgcctctaacgcagcagagagctgcactgattggccgcagcgctggggctcc
tcagacgtcgtcacctacctgacggctcgtcagaggcggagtcgaggtctgatgaacatg
cccaagacgttggctctgatccacctcgctctgctctggagccgcgagcctctgacgctc
agcgacctgctcaggttggtgaacggaggtcacgtcccgtacgtaaacgccttcgaggaa
cttccagaggagatgaagctcgacggtaaagacgctctcatcttcagagtcgagagcgtc
ccgtcccaccggctcgtccagcgccaggctcagactctgcttctgttcctgcagcttcca
acctttcctccaatcagccgacagagtctgctgcacccagcgctgctcagcctgcgctac
ctggcagacgccaacctgcccgacgatctccacccgtgggtctgcaggctgatgcacgac
gccggtttgggtgatttcacgttggaccccacgtcttgtcccgtcctgccacagtacgac
atccagaccgccgccgtcatcgtcgtcaccatgaagctcatcttcggcctggacgaccac
acagagtgggatttatctgacgaatccggtgtccaggacgactcagaaagcatgtttaac
ctgaggaggtggttcagattgacgcaggctgctctgatcgcagctcagcagaagagacac
cacgacgtcgccaggaaacagtggaaggccaagaaacctctttacccgagcagagactta
aaagctgttgtgatgaaaaggaaacggacagcagagcaggttcagatgtgttttgaaaag
ctgtcttctcgtcccgtgggcgtccagcgctgcggtccgtccagcttcatattctgttgg
ggggacgaggacggagcagacggtcccagtctgcaccaccagaagctggaccgagtcttg
accctgaaacacaacgtccagactctgtctaacacagcatactggcacacggcgctccga
gtctgcgaccccaagaagtgcaggagtcattacttggaggtggaggcgacgctgcctcgg
tcgttcgtgtggctgctgcagctcttctccttcctgctgaacgtgaagccggccaacctg
tacgaggaggtgctgaaggtggagagacgagtcctcgaccgcagacacctgaggaggaag
gggaggaccaccaggtccgaggacatgatcgtcagctga
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