Hippoglossus stenolepis (Pacific halibut): 118104038
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Entry
118104038 CDS
T08308
Name
(RefSeq) transcription factor IIIB 90 kDa subunit
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsp03021
]
118104038
Transcription machinery [BR:
hsp03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
118104038
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
RB_B
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-GeneID:
118104038
NCBI-ProteinID:
XP_035006994
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All DBs
Position
20:21028932..21050596
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AA seq
709 aa
AA seq
DB search
MSSRVCRTCGGADVDVDQARGSAVCTSCGSVLEDNIIVSEVQFVEGSGGVSSAVGQFVSA
DGPVKAPLLGSGFHTSVGKESRAQTLQSGKRQIQQLGSQLQLNQHCLDTAFNFFKMVVSK
HLTRGRKMEHVIAACLYLVCRTEGTPHMLLDLSDLLQVNIYILGKTFLLLARELCINAPA
IDPCLYIPRFAHMLEFGVKTHEVSMTALRLVQRMKRDWMHTGRRPSGLCGAALLVAARMH
KFRRTVKDVISVVKVCQTTLRKRLTEFEDTPTSQLTIDEFMRVDLEQECDPPSFTAGQHK
AKMQQLEQELTKKLDEVEGEISCYKDEIETELEKSRPKLRGIYSAYAKEIDPEEAEGLSV
TSEPEEPEVEDAELQAATQHLTQDFLCQVIQEEEGRDKRTGDSKQEAGPEKDGVGPQHQV
PPQRQVPPLAVILGKLTSSCSLDLQQTLQNFNESEAGQKPDGDQSESGVLDLDGIDDQEI
EKYILNDKEVQVKTELWMKQNAEYLREQKEKEEKIKKEKEQGTYKEKKKKKRCKKGEQIE
ALTAGEAIEKMLEKKKISSKINYDVLRDLNTRGTGSGGGSSPSRAASDPPDPPDSQTRKR
LNRRRHRTTEINQDLAANASIMRKRFRRLISSTTKKKKKNMTVSEVENSVTMTTQATTET
AAESTPDPAPSSTPTDAPPTVEEEEEGEEECVSALKLVGDYGCEDEDLF
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccgggtgtgcaggacctgcgggggtgcggatgtggacgtggaccaggcgcgg
ggcagcgcggtgtgcaccagctgtggctcggttctggaggacaacatcatcgtctctgag
gttcagtttgttgagggaagtggaggcgtctcgtctgctgtgggacagttcgtctctgct
gacggtccagttaaagctcctcttcttggttctggtttccacaccagtgttggtaaagag
tccagagcccagactctacagagtggtaagcgtcagatccagcagctgggtagtcagttg
cagttgaaccagcactgtttggacacagccttcaacttcttcaagatggtcgtcagtaaa
cacctgactcgaggacgcaagatggagcacgtcatcgctgcgtgtctctacctggtgtgt
cgcaccgaggggacgccacacatgctgctggacctgagtgacctgctgcaggtcaacatt
tacatcctgggaaagacgttcctgctgctcgctcgtgagctctgcatcaacgctccagca
atcgatccttgtctctacatccctcgttttgctcacatgttggagttcggggtgaagact
catgaagtttccatgacggctcttcgtctggttcagaggatgaagagggactggatgcac
acgggacgccgaccctccggcctctgtggagcagctctcctggtcgcagcacggatgcat
aagtttcgtcgaacggtgaaggatgtgatcagtgtggtgaaggtctgtcagaccactctg
aggaagaggttgacagagtttgaggacacgcccaccagtcagctgaccatcgatgagttc
atgagagtagatctggagcaggaatgtgatccaccctccttcactgctggacagcacaag
gccaagatgcagcagctggaacaggaactgaccaagaagctggacgaggtggaaggagag
atcagctgctacaaagacgagattgagaccgagctggagaagagtcgacccaaactgaga
ggaatctactctgcctacgccaaagagatcgacccagaggaagccgagggattgtccgtg
acctctgaaccagaagagccggaggtggaagatgccgagctccaagctgccactcagcat
ctgacccaggacttcctgtgtcaggtgatccaggaggaggaggggcgggacaaaaggaca
ggagacagcaagcaagaggcgggcccagagaaagatggtgtggggcctcagcaccaagtc
ccgcctcagcgccaagtcccgcctctggccgtcatcctggggaagctgacgagctcctgc
agcctcgacctccaacaaacactccagaacttcaacgagtccgaggcgggacagaaacct
gatggtgatcagtcagagagcggagtgctggacctggacggcatagacgatcaggagatt
gaaaagtacattctgaacgataaggaggttcaggtgaagacggagctgtggatgaaacag
aacgcagagtacctgagagagcagaaagaaaaagaagagaagataaagaaagagaaagaa
caggggacatataaagagaagaagaagaagaagagatgcaagaagggcgagcagatcgag
gcattgacagcaggcgaggcgatcgagaagatgttagagaagaagaagatctccagcaag
atcaattacgacgttctccgagacctgaacaccagggggacggggagtggggggggcagc
agtcccagcagagctgcctctgacccccccgatccccccgactcccaaacacggaaacga
ctcaaccgccgccgccacaggacaactgagatcaaccaagaccttgctgctaacgctagc
atcatgagaaagaggtttcgtcgcctaatttcctccacaacgaagaagaaaaagaagaac
atgactgtgtctgaggtagaaaactctgtcaccatgacgacacaagcaacaacagagacg
gcagctgaatcgacccctgacccagcgcccagctccacccccacagatgcccctcccact
gtggaggaggaagaggagggggaggaggagtgtgtcagcgctctgaagctcgttggagat
tacggctgtgaggatgaggaccttttttag
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