Hippoglossus stenolepis (Pacific halibut): 118104174
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Entry
118104174 CDS
T08308
Symbol
rbm12
Name
(RefSeq) RNA-binding protein 12
KO
K24526
RNA-binding protein 12
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsp03041
]
118104174 (rbm12)
Spliceosome [BR:
hsp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
118104174 (rbm12)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Motif
Other DBs
NCBI-GeneID:
118104174
NCBI-ProteinID:
XP_035007056
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All DBs
Position
3:5560291..5570553
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AA seq
902 aa
AA seq
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MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGEHGEAFIVFATDEDARLGMMRT
GGSIKGSKVSLLLSSKTEMQNMIELSRRRFEAGAGAVETAAPTAGNANRQGGTAPMPTVQ
PGAGGRSGSHGNQGFSNTSASVTAASSIQEPPSHKVAASLASIVHCFPNSYSSTPTITTA
LASLNAGPPPIPPLPSMPSMPPMPTLPSIPVPPPVSSLPPVPTVSPMSQGPPMPPMSHLS
HMSSLPPFNPSLPPPAGLGPGLPLGTPNSMLFNPLSPLASLGLQAHMKAAAAVATGVGIA
NPDELFVLLQNLPFSCSEVEVREFFRGLGVDGARLLRDGQGRPTGRAMVKFFSPQDSFEA
VKRGGGMMGQRFIEITPSSERQWASLSDGMMGHAPHNSSKSDHINEFHDHQHRRGNAGSG
GRDQRGRSRSPHRQEFCVYLKGLPYEADKKQIKEFFNNLSIVEDSVYIAYGPNGRATGEG
FLEFKAEQDHKTALGAHMQYMGTRFIQVQPISRKGMLEKIDSIRKREATQGDGKNQDGLK
APRNCAHITNIPYNISKKDVRAFLDGVGLYEDTLKVLTDSHGNGLGQSIFQLRTEEDARK
AERLHRQKLNGRDAFIHLVTFEQMKEIERNPPPQNKRGQRNQNQQGQNQNPHQQTQPSPQ
QPQINPFAGISGEEFNFLRNTMGNLNNAPFVTPFSAPGNGLAGPPPLPPLTAGLGDVNLG
VAPPLVAGLPGAPIMEPPGFRTGTGGGAPFSQDGLRGLVPFESANRKASGGGQNRGGGAN
SNQGRPGGGATGGQQVFTQGADSLRNQPAPGGSNNPNSQRGAAGPTIVKLQNMPFTVTVD
EIMDFFYGYQVLQGSVCLQFSEKGLPTGEAMVAFQNHEEAAAAVMDLNDRPIGARKVKIS
LG
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagtcatcagactgcagggtctgcccatagtggctgggaccatggacatcaga
cacttcttctcaggcctcaccatccctgacgggggagtgcacatcgtagggggtgagcat
ggcgaggccttcatcgtttttgccactgatgaggatgctcggctggggatgatgcgtaca
ggcgggtccattaaaggctccaaagtgtcgctgttgctgagcagtaagacagaaatgcag
aatatgattgaactcagtcgccgcaggtttgaggctggagcaggtgctgttgaaacagct
gcacctacagcagggaatgccaatcggcaagggggcacagcccctatgcccacagtgcag
ccaggggcaggggggagaagtggtagccatggaaaccagggtttcagtaacacctctgcc
tcagtgacagctgcaagctcaatacaggagccaccaagccacaaagtagcagccagcttg
gctagcatagtgcactgcttccccaacagttacagctcaacacctacaatcaccacagcc
cttgcatcactcaatgcaggccccccgcccatccctccacttcccagcatgccttccatg
ccccccatgcctacactgcccagcattccagttccacctccagtgtcctcgctaccccct
gtccctactgtctcccccatgtcacaaggccctccaatgcctcctatgtctcacctctcc
cacatgtcttccctgcctccctttaacccctccctacctcccccagcaggattaggccca
ggtcttcctcttggaacccccaattcaatgctgtttaatcctctctcccccctggcctct
cttggccttcaggcccacatgaaggctgcagcggctgtagccactggggtaggaatagct
aatccggatgagttgtttgtcctactgcagaatctcccattctcctgctcagaggtggag
gtcagggaattcttccggggtctgggtgtggatggggctcgtctgctgagggatgggcaa
ggtcggccaactggcagggctatggttaagttcttctcacctcaggacagctttgaagca
gtgaagcggggaggtggcatgatgggtcaaaggttcattgaaatcactccatcctctgag
cggcagtgggccagcctcagtgacggtatgatgggtcatgctccacataatagcagcaaa
tcagatcacatcaacgaatttcacgaccaccagcaccgtcgtggtaatgctgggtccgga
ggtagggatcagcgaggaaggtcaagatctccccaccggcaggaattctgtgtctacctg
aagggccttccctatgaggcagacaagaaacagattaaggagttctttaacaatttgtct
attgtcgaggacagtgtctacatcgcctatggacccaatgggcgagccacaggagaaggc
ttccttgagttcaaagcagaacaggaccacaagactgctctgggtgctcacatgcagtac
atgggcacccgctttatacaggtccagccaatcagccggaaaggaatgcttgaaaagatt
gattccatccgcaaacgtgaagcaacacagggtgatggcaagaaccaggatggcctgaaa
gctcccaggaactgcgcccacatcaccaacattccttacaacatctccaagaaggatgtt
cgtgccttcctcgatggtgtagggctttatgaggacaccctgaaggttctgacagatagc
catggcaatggtttagggcaatccatcttccagctgcgaactgaggaagacgcccgcaaa
gctgaaagactgcaccgtcaaaaactcaatggccgtgatgcctttatccacctagtgacc
tttgagcaaatgaaggaaatcgagagaaatcctccccctcagaacaagaggggtcaacgc
aaccaaaatcagcagggccaaaatcagaatccgcaccagcaaacccagcccagtccccag
cagccccagatcaacccatttgctgggattagtggggaagagtttaactttctcagaaac
actatggggaacctcaataatgccccctttgtgactccattctcagccccagggaatggg
ctggcaggccctcctcctctgcctcccctgacagcagggctgggagacgtgaatctgggt
gtggctccaccactagttgccggtcttcctggagcaccaatcatggagccaccaggcttt
cgaactggaactggaggaggagctccattcagtcaagatgggcttagaggcttggtgccc
tttgaaagtgccaacagaaaagcaagtggaggaggacagaatagaggaggaggtgctaac
agcaaccaaggacgtccaggtggtggggccacaggtgggcagcaggtgttcactcaagga
gctgacagtctccgtaaccagccagcccccggcggatccaacaatcccaatagtcaacgt
ggtgctgctggcccaacaattgtaaaacttcagaacatgccattcactgtaaccgtggat
gagatcatggacttcttctatggctaccaggtgttgcaaggctcagtctgcctgcagttc
agtgagaaaggcctaccaactggcgaggccatggtggcctttcagaaccatgaggaggct
gctgctgctgtcatggacctcaatgaccgacctattggcgctcgtaaagtcaaaataagc
cttgggtaa
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