KEGG   Hippoglossus stenolepis (Pacific halibut): 118104402
Entry
118104402         CDS       T08308                                 
Symbol
ell2
Name
(RefSeq) RNA polymerase II elongation factor ELL2
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
hsp  Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:hsp00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    118104402 (ell2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:hsp01009]
    118104402 (ell2)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hsp03021]
    118104402 (ell2)
Protein phosphatases and associated proteins [BR:hsp01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     118104402 (ell2)
Transcription machinery [BR:hsp03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     118104402 (ell2)
    Little elongation complex (LEC)
     118104402 (ell2)
SSDB
Motif
Pfam: ELL Occludin_ELL COG3_N
Other DBs
NCBI-GeneID: 118104402
NCBI-ProteinID: XP_035007146
LinkDB
Position
3:complement(21288463..21306145)
AA seq 686 aa
MLRPQRDDGGGLVKMAAALSEDGRYGLNCGQQSADRVTVLHVKLTETAAKAIESYQNCGN
VPSPRPTIQFKGLQGRIKIPKTNSSSDTFNSFDFYLSNVGKDNPQGSFECIHQYVSSSGA
SHLALLATVQDKVTVCATNDSYQVTRERMTQAVEDTRERGTKVIKPGGQYRGKRVHIRKP
AITNTEVVPERKRSTPINPANTIRKCLSNNPVSQRPFRDRLIHLLALRPYKKLEVLARLQ
RDGINQKDRTSLGTTLQQVANLNPKDNTYSLKDFIYRDVHRDWPGYSEDEKTQVDRILAR
KLGLPTETQSSSSSPKDGAPTSPQKRQPDFDFIDPLAPKKARISHLSNRGPAASSSSSSD
RHEDEGSPSSKRSSLPSITSGPPTHLPISSHPPAPSHQQPSPASNTNSPSTPEGCGTQDL
PMDQSSSCRDPSPSPFPSDRTLQDRFLQPVPIPRTASSPSPPPRTSLTVTSTVITSPPLS
SSTNKKVKKKSKKHKDKDREKEKDKGKQTERGSSSPPSVTELAEEIPKAKKKRSAEEDKR
EVIEKHPHKDQDSSDKQKPVQSTEFSSTIEMPDYVVKYMPLMSMDQRQSFKDDFNAEYDE
YRLLHARVESITRRFTQLDTQCRKLSPGTKEFQKVQEEVLKEYKKMKQHNPNYHEEKQRC
EYLHNKLAHIKRLIADFDQRRAQAWC
NT seq 2061 nt   +upstreamnt  +downstreamnt
atgctccggcctcagagggacgatggtggagggctggtaaagatggcggcggcgctctcc
gaggatgggaggtacggactaaattgtggccagcagagcgccgacagagtcaccgtactg
cacgtcaagttgaccgagacagccgcgaaagccatagagagctaccaaaactgtgggaat
gtaccttctccacggccaacaatacaattcaagggactccaagggcgcattaaaattccc
aaaaccaattcctcgtctgacaccttcaacagttttgatttctacctgtctaatgtgggc
aaagacaaccctcagggaagctttgagtgcatccatcagtatgtgtcgagctcaggggcc
tcacacctggcattgttggcaacagtacaggacaaggtcacagtgtgcgccactaatgac
tcctaccaggtgacccgggaacgcatgacccaggccgtggaggatacacgtgaacgtggg
accaaagtcatcaaacccgggggccagtacagaggaaaacgagtccatatccgtaagcct
gcaataacaaacacagaggtggtccccgaacgcaagcgctccacacccatcaacccagcc
aacactattcgcaagtgcctttccaataaccctgtgtcccagcggccattcagggaccgc
ctcatccacctgctggcactgaggccctacaagaagctggaagtgctcgcccgtctgcag
cgggatggtatcaaccagaaggacagaacctcactggggactaccttgcaacaggtggcc
aacctgaaccccaaagacaacacatactccctgaaggactttatttatcgtgatgtccac
cgagactggcctggttactctgaagatgagaagacccaggttgaccggatcctagctcgc
aaattaggtcttcccactgagacacagtcatcaagcagttctcccaaagacggtgccccc
acatccccccagaaacggcagccagactttgacttcatcgacccattggcgcccaagaaa
gcccgcatctctcacctcagcaatcgagggccagctgcatcttcatcctcctcctctgac
cgccatgaggatgagggcagccccagctctaaacgctcgtccctaccctccatcacctcg
ggccctcccactcatctccccatttcttcccaccctcccgcaccctctcatcagcagccc
agcccagcctccaacaccaactctccaagcaccccggagggctgtggcacccaggatctg
cccatggaccagagttcctcttgtagagacccttcacccagccccttcccctccgatagg
accctgcaggaccgctttcttcaaccggtcccaattccaagaacagcctcctcccccagt
cctcctccccgcacctcactcacagttacctccactgtcatcaccagccctcctttgtcc
agcagcaccaacaagaaggtcaaaaagaaatccaagaagcacaaagacaaggatcgggag
aaggagaaggacaaagggaaacagacggaacgaggcagcagtagtcctcccagtgtgaca
gagctggcagaggagattcctaaagccaaaaagaaacgcagtgctgaggaggacaagaga
gaagttatcgaaaaacatcctcacaaagatcaagactcttctgacaaacagaaaccggtc
cagtccactgagttctcctccactattgagatgcctgactatgtagtgaagtacatgccc
ttaatgtccatggaccagcggcaaagcttcaaggacgactttaatgcagagtatgatgag
taccgcctgctgcacgcccgagtggagagcatcacccgccgcttcacccagctggacacc
cagtgccggaagctctcgcctggcaccaaagaattccagaaagtgcaagaggaagtcttg
aaagagtacaaaaagatgaaacaacacaaccccaactaccacgaggagaaacagcgttgc
gagtacctgcacaacaagttggctcacatcaagcggctaatagctgatttcgaccagcgc
agagcccaggcctggtgctga

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