Hippoglossus stenolepis (Pacific halibut): 118104403
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Entry
118104403 CDS
T08308
Name
(RefSeq) globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 isoform X1
KO
K00722
globoside alpha-N-acetylgalactosaminyltransferase [EC:
2.4.1.88
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp00603
Glycosphingolipid biosynthesis - globo and isoglobo series
hsp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
118104403
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
hsp01003
]
118104403
Enzymes [BR:
hsp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.88 globoside alpha-N-acetylgalactosaminyltransferase
118104403
Glycosyltransferases [BR:
hsp01003
]
Glycan extension
FORS blood group (Forssman antigen)
118104403
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_6
Motif
Other DBs
NCBI-GeneID:
118104403
NCBI-ProteinID:
XP_035007147
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Position
3:complement(21310611..21313707)
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AA seq
376 aa
AA seq
DB search
MRRKVRGKYYKSNTKREKEGQAGHSMALFPFCKTPTGPVRVTRIQLVLYCFLLSLIIYFL
HGREAAAGVKPSHPIFNAMGMDRGGVITDMMVVKAAVPQTPVETPWGAPLVWGDTRNSAW
RRAKLSQHGIRTGLLVLMVGTYSHFMRRFLSSAETHFLPGQMVTYYILTDSPHSLDPPVK
LGPERELKVVPIAELPGWERLAYRRMALVSDAIRDQIGSEVEYVFCADIDQEFVAPVGEE
ILGDLVATLHPELYGMPRNTFPYEIEEASSACVDDDEGDYYYTSELYGGLVSEMYRMSRA
CSMLIFQDQANGVVARGLEESYLNRYLIDHRPTCVLSPEYSWWDSALAADVPVQRLVSLG
RQCESYDKQTREERRC
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagaaaagtgagaggaaaatattataaaagcaacacgaagcgagagaaagagggg
caagcaggacacagtatggcgttgtttcccttctgcaagacgcccacaggaccggtcaga
gtgaccagaatacaactggtcctgtactgttttctcctgtctcttatcatatattttctc
catggacgtgaggcggctgccggtgtgaagccgtcacatcctatctttaatgccatggga
atggacagaggaggcgttataacagacatgatggtcgtcaaagcagcggtgccacaaact
cctgtggagacaccgtggggcgctcctttagtgtggggtgacacccgcaactccgcctgg
cgcagagctaaattgtcacaacatggaatccgcacaggtctgctggtcctcatggtggga
acgtacagccacttcatgcgacgtttcctctcctcagctgaaacccacttcctccctggt
cagatggtcacctactacatcctcacagacagcccccattctctggatccccctgtcaag
ttggggcctgaacgagagctgaaggtggtacccatcgcagagctgcccgggtgggaaagg
ctggcctatcgtcgcatggccctggtctccgacgccatcagagaccagatcggcagcgag
gttgaatacgtcttctgcgctgacattgaccaggagtttgtggcccccgtgggggaggag
atcctcggagacctggtggccacattgcacccagagctctatgggatgcctcgaaataca
tttccttacgagatcgaagaggcctcatctgcttgtgtggatgacgacgaaggggactac
tactacacctcggaactgtacggcgggttggtgtctgagatgtacagaatgtcccgcgcc
tgttccatgctcattttccaagaccaggcaaatggggtggtggcgaggggcctcgaggag
agctacttgaaccgctacctgatcgaccacaggccgacctgtgtgctgtctccagagtac
agctggtgggactcggccctggctgctgatgtgcctgtacagaggctggtctctttggga
agacaatgtgagtcttatgataaacagacgagagaggagaggagatgctga
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