Hippoglossus stenolepis (Pacific halibut): 118104409
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Entry
118104409 CDS
T08308
Symbol
pcif1
Name
(RefSeq) mRNA (2'-O-methyladenosine-N(6)-)-methyltransferase
KO
K17584
phosphorylated CTD-interacting factor 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hsp01009
]
118104409 (pcif1)
Protein phosphatases and associated proteins [BR:
hsp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118104409 (pcif1)
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Gene cluster
GFIT
Motif
Pfam:
PCIF1_WW
WW
PRC2_EED_ins
Motif
Other DBs
NCBI-GeneID:
118104409
NCBI-ProteinID:
XP_035007159
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Position
3:585142..595873
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AA seq
732 aa
AA seq
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MSNDSQASVKGEATIILSPSGSTSSQGPPLSPSTTSKPPELPDELVQAGWSKCWSRRENR
PYYFNRFTNQSLWEVPVLGQHDVISDPLGLNAAPAEGGDSNHGNGQRKRRSSEEQGAGPN
SLKRAKVEPTTPISPSTPGLKPWSSAPEDKQAQSATPATLSLAPAPYRPAVIYWDLDIQT
NAVIREHPSANHLPPHPEIELQRAQLVTKLRQHYHELCHQREGIDPPRESFNRWLLERKT
IDKGHDPLLPSDCDPIISPSMFREVMNDIPIRLSRIKYKEEARKLLFKYAEAAKKMIDSR
NASPESRKVVKWNAEDTMSWLRRDHSASKEDYMDRLEHLRQQCGPHVTAVAKDSVEGICS
KIYQLSAEYSRRLRHTHLSLLQEPPTEACASPQQSRLVYCYPVRLAIASPPLPRVELHFE
NDVACLRFRGEMVKVNRGHFSKLELLYRYSCIDDPRFEKFLSRVWCLLKRYQEMFGSGAN
EGTGLQGALPVAVFEALNRQFGVSFECFASPLNCYFKQFSSAFPDIDGFFGSRGPFLSFS
PVSGSFEANPPFCEEMMDAMVTHFEDLLDQSSEPLSFIVFVPEWRDPVTPALTRMEGSRF
LRHQLSVPAYEHEYRSGSQHICNREEMSYRAVHGTAVLFLQNNAGFVKWAPTPERLAELT
KAYRPSSARPSSLSSPGPANVAPGDKDSTPKASDRTQSSVTSPGSHDNNNNNNNDNSSSS
SSSSPQDKMAAV
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatgacagccaggcatcagtgaagggggaggcaaccataattctgtctccctct
ggctccacctcctcacagggaccgcccctgtctccgtccacaacgtccaaaccacctgag
ctgccagatgagctggtccaggctggatggtctaagtgttggtctcggagggagaaccga
ccatattattttaacaggttcaccaatcagagcctgtgggaggtgccggtgctcggtcag
catgacgtcatttccgatcctttaggtctgaatgcggctccagcagaaggtggggacagt
aaccatggtaatggtcagaggaagaggaggagctctgaggagcagggggcggggcccaac
agccttaaacgagctaaggtggagcccaccacgcccatctctcccagcacccccgggctc
aaaccctggagctctgcccctgaggacaaacaggcccaatcagctacacccgcaactcta
agtcttgcccccgccccctacagaccagctgtgatctactgggatctggacatccaaacc
aacgctgtgatcagagagcacccctccgccaatcacctgccccctcatcctgaaatcgag
ctgcagcgagctcagctcgtcacgaagctgagacaacactaccacgagctgtgtcaccag
agagaaggtattgatcctcctcgcgagtcgtttaatcgttggctactggagaggaaaacg
attgacaaaggtcatgaccctttactgccgagtgactgtgaccccatcatctccccgtcc
atgttcagagaggtcatgaacgacatccccatcaggttgtctcgtattaagtacaaagaa
gaagctcgcaagctgctgttcaaatacgctgaggctgccaagaagatgatcgactctagg
aatgcgagtccagagagcaggaaggtggtgaagtggaacgctgaagacaccatgagctgg
ctgcgtcgagatcactccgccagcaaagaggactacatggatcgtctggaacacctgagg
cagcagtgtggtcctcacgttaccgccgtcgccaaagactccgtcgaaggaatttgctct
aagatctatcagctgtctgcagagtacagccgccgcctgagacacacacacctgagtctg
ctgcaggagccacctacagaggcgtgtgcgtcccctcagcagtcgcggcttgtctactgt
taccctgtgcgtctggcaatcgcctcgccgccgctcccccgggtggaactgcactttgaa
aacgacgtggcgtgtttgcgtttcaggggagagatggtcaaggtcaacagaggtcacttc
agcaaactggagctgttgtacaggtacagctgtattgacgatcctcgctttgagaagttt
ctgtccagagtctggtgcctcctgaagagataccaggagatgtttggcagcggtgctaat
gaggggacaggcctgcagggggcactgccggtggcagtgtttgaagccttgaaccgacag
tttggtgtttccttcgagtgcttcgcctctccgctcaactgctacttcaaacagttctcc
tcggctttccccgatattgacggcttctttggatctagagggcccttcctgtccttctct
ccagtcagtggctcgtttgaagccaaccctccgttctgtgaagagatgatggatgcaatg
gtgacacacttcgaggaccttctggatcagtcctcggagcctctgtccttcatcgtcttt
gttcctgagtggcgtgaccccgtgaccccggctctgactcgcatggagggaagtcgattc
ctccgtcatcagctgagtgtccccgcctacgagcatgagtatcgatctgggagtcagcac
atctgcaatagggaggagatgtcgtacagggcggtccacggtactgcggttctcttcctt
cagaataacgcaggttttgtgaagtgggctccaactccggagcgtctggcagagctgacg
aaggcgtaccgcccctcctccgctcgcccctcctccctgtcttctccaggccctgccaac
gttgctccaggagacaaagactccacccccaaggcctctgataggacgcagagcagtgtg
acgtcaccagggagccatgacaacaacaacaacaacaacaacgacaacagtagcagcagt
agcagcagtagtcctcaggacaagatggctgccgtgtag
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