Hippoglossus stenolepis (Pacific halibut): 118104467
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Entry
118104467 CDS
T08308
Name
(RefSeq) RNA-binding protein Musashi homolog 1 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118104467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118104467
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
118104467
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
PHM7_cyt
NID
Motif
Other DBs
NCBI-GeneID:
118104467
NCBI-ProteinID:
XP_035007252
LinkDB
All DBs
Position
3:20687849..20714737
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AA seq
387 aa
AA seq
DB search
MELHCLSSPHSAGITPAESGMDTEGSQSSLSSGTDNSPHDPCKMFIGGLSWQTTQEGLKE
YFCKFGEVKECMVMRDPVTKRSRGFGFVTYADQDGVEKVLAQNRHDLDSKTIDPKVAFPR
RAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFE
NEDVVEKVCEIHFHEINNKMVECKKAQPKEVMTPTGSARGRSRVMPYGMDAFMLGIGMLE
PKREPLQLSTGSNLWLGYPGFQTTTYTSRSYSGIAPGYTYQFPEFHLERTPLMTSSHPQE
LAAIPLSAYGPMAAAAAAAVVRGSTPSRTAGFLGTSSPGPMADLYAAANQDSGVASYMSA
ASPAPSSAFGHGLGGPLIATAFTNGYH
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggagctccactgcctttcctcgcctcacagtgcgggaattacaccagccgagagcgga
atggacacggaagggagccagagcagcctttcctccggcacggacaactccccccacgac
ccctgcaaaatgttcatcgggggtctgagttggcagacgacacaagagggtttgaaggag
tacttctgtaaattcggcgaggtgaaggagtgcatggtgatgcgagatcccgttaccaag
cggtcgaggggcttcgggtttgtaacatacgcagaccaagacggtgtggaaaaggttttg
gcgcaaaacagacacgacctggactccaaaacgatcgaccctaaagtggcatttccccgt
cgggcccagcccaagctggtgaccaggacaaagaagatctttgtcggagggctgtcagtc
aataccaccatcgaagatgtgaagcaatacttcgaccagtttggaaaggttgacgatgcc
atgctcatgttcgacaaaacaaccaacagacacagaggttttggctttgttacctttgag
aatgaggatgtggtggagaaagtgtgtgagattcacttccatgagatcaacaacaaaatg
gtggaatgtaagaaagcccagcccaaggaggtgatgacaccgacaggctcagccagaggc
cgctccagagtgatgccttatgggatggacgccttcatgctgggcattggcatgctggaa
ccaaaaagagaacctctacaactatcaactggttcgaacttgtggctgggctacccaggt
tttcagactactacctacaccagccgcagctactctggaattgcgcctggctacacttat
caattcccagaattccatttagagaggacccccctcatgacatcatcccacccccaagag
ctggcagccattcctctgtctgcatatggaccaatggcagcagccgccgcagcagcagta
gttagaggctccaccccttcacgcacagctggtttcctgggcaccagcagccctggacca
atggctgacctgtatgctgcagccaatcaggactcaggagttgccagctacatgagcgcc
gccagccccgcccccagttcagcgttcggccacggtctagggggtcctctgattgctact
gcgttcactaatggctaccactga
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