Hippoglossus stenolepis (Pacific halibut): 118104470
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Entry
118104470 CDS
T08308
Symbol
brpf3a
Name
(RefSeq) bromodomain and PHD finger-containing protein 3 isoform X1
KO
K11350
bromodomain and PHD finger-containing protein 3
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsp03036
]
118104470 (brpf3a)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
MOZ/MORF complex
118104470 (brpf3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EPL1
zf-HC5HC2H_2
Bromodomain
zf-HC5HC2H
PWWP
PHD_2
PHD
PHD_NSD
FYVE_2
DNA_topoisoIV
C1_1
Motif
Other DBs
NCBI-GeneID:
118104470
NCBI-ProteinID:
XP_035007256
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Position
3:12662199..12673811
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AA seq
1235 aa
AA seq
DB search
MRKVSRWECETVVRGLNMGRGRGRGRGRGRGSSGQLRPPSPYRLQLSPSRETLTYAQAQK
IVEVDLEGRLHRIHITDPLPVITEDEMTAQDITECNSNKENSEQMQSKTRSWKKPTNSKS
KKSGKNTTHQNQRSGSQHTGATNSLQHPSNQSPLPEPTFRVLSSVHPSEAPPLPAAYYRF
IEKSLEEQDSVAEYDMDEEDLAWLEMVNQKRVCDGHASVPPDTFELLIDRLERESILESR
SQALSQSAVDEDAFCCVCLDDECLNSNVILFCDICNLAVHQECYGVPYVPEGQWLCRCCL
QSPSRPVDCVLCPNRGGAFKQTSDGRWAHVVCAIWIPEVCFANTVFLEPVEGVKNIPTAR
WKLTCYLCKQKGRGASIQCHKANCYRAFHVTCAQKAGLFMKIDPVRETGINGTTFSVKKT
AFCEHHSPVGFRRDGSGDESVEGRLVGGRGNRGQRSYTQSPPSPTNKKATKGQKKKNTKR
SGGSTRRSNVPVLLVPQIPSHRLNKICTGVEVQRKTQFMQRLHNYWLLKRQSRNGMPLIR
RLHSHLQTQKPTEQREPDEKLCAAREELRYWQKLRQDLERARLLVELIRKRERLKREQMK
IQQAALELKLTPALMLLRSTLDQLQEKDTAKIFCEPVNLSEVPDYLEFVSQPMDFSTMRT
KLEGHGYCSITDLERDFELMISNCLKYNSKDTMFHKMALQLREVGGAVLRHAHRQSQSIG
LDPNTGMHLPEAPNKHGFCHCTWDDVDPLLDPENRLHLTTDEQLKALLDKLDMVSSMRTS
GGRTKRIRLLRREINTIRQKMNQQQSTQCVNGNDKDDEGPDDEGEEEEEEEEKEKKSEKT
DVVDNGHLTAVSNSVTDDSPPVLELTCPVSSPLPGDAPLEPPVLGIVTGGRRSPGRSFKR
QRSSRSGSKSQGEDEAEVGETPSSQQEAVHEVTPLGSPPTLPLAGVGRRTSVLFKKAKNG
SRMAKNKSPLQQNGKTADSKTNGLESTSARPKSPSVTNITALPPTPNPSPAPPSPSAHHL
RSRGFSPETEADKLPPPPKESGLTNGKHTSADHDDDDQKLNCSVSPPKRSRGKPALAKVP
SSENGDISGSGKSTLLSLDSETELAPLDLVWAKCRGYPSYPAMIVDPDMPQEGLLHNGIP
IPVPPVEVLKLGEWRQTDEGEKLFLVLFFDTKRTWQWLPRDKLLSLGMDDTVDKLRLMEG
KKPSVRKSVHTAYDRAIVHLNHVRGNLNFTPSNFI
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgcggaaggtgagcaggtgggaatgtgagacagttgttcgcggactcaacatgggtagg
ggtcgaggtagaggaagaggaaggggcagggggtcgtctggccagctacggcccccatcg
ccctacagactgcagctctctccgtccagggagactttgacatacgctcaggctcagaaa
atagtggaggtggacctagaagggaggctccatcggattcacatcacagatcctctgcca
gttataaccgaggatgagatgacagcccaggacataactgagtgcaacagtaataaggag
aacagtgagcaaatgcagagtaaaaccaggtcatggaagaaacccacaaacagtaagagc
aagaagagcggtaaaaatacaactcaccagaaccagcggtctggctcccagcacacagga
gctactaattccctccagcacccatccaaccaaagccccctacctgagcccaccttccgt
gtgctgagttcagttcacccctcagaggcacctcctcttcccgcagcgtattaccgtttc
atagagaagtctttagaggaacaggacagtgtggctgagtatgatatggacgaggaagac
ctggcctggctggagatggtgaaccaaaagagggtgtgtgacggtcacgcctcagtacct
ccagacacgtttgagctgctgatcgaccgtctggagagggagtcaatcctggagtcccgc
agccaagctctgtcccagagtgcggtcgatgaggatgcattctgctgcgtctgcctggat
gacgagtgtctcaacagtaacgtcatcctgttctgtgacatctgcaacttggctgtccac
caggagtgttacggtgtgccctacgtacctgagggccagtggctgtgccgctgctgcctg
cagtccccttcccgtcctgtagactgtgtgctctgtcccaaccgaggaggtgccttcaaa
cagacgagtgatgggcgttgggcccacgttgtctgtgccatatggatcccagaggtgtgc
tttgccaacacagtgtttttggagcctgttgagggcgtcaaaaacatccctactgctcgc
tggaagctcacctgctacctgtgcaagcagaaaggcagaggagcgtctattcagtgccac
aaagccaactgttacagggcttttcacgtcacctgcgcccagaaggccggcctctttatg
aagatagacccagtccgcgaaacgggcatcaacggtaccaccttctctgtgaagaagact
gctttctgtgagcatcactcgcccgttgggtttcggcgggatgggtcaggagacgagtcg
gttgaaggaagactggtggggggcagagggaaccggggtcaaaggtcatatactcagagc
ccaccttcaccgacgaacaagaaggctaccaaaggccagaagaagaagaatacaaaaagg
tccggtgggtcgacacgtcgctcaaatgtgcctgtgctgctcgtgcctcagatcccttct
cacagactgaacaagatctgcacaggagttgaagtccagagaaagactcagttcatgcag
aggcttcataactactggttactaaaacgacagtcgcggaatgggatgcctttaatacgc
cgacttcactcccatctgcagacccagaagccaacagaacagagggagcctgacgaaaag
ctgtgtgctgcaagagaggagcttcgatactggcaaaagttgaggcaggacctggaaaga
gccagacttctggtggagctgatccgcaagagagagaggctaaagagagaacagatgaaa
attcagcaggctgcccttgagctgaagttgaccccagcgctgatgcttctccgatccacc
ttggaccaactgcaagagaaggacacggccaaaatcttctgtgagcccgtcaatctttca
gaggtcccagattacttggagtttgtttcccaacccatggacttctccaccatgcgcacc
aaactggagggacacggctactgctccatcacggacctggagagggactttgaactgatg
atttccaactgcctcaagtacaactccaaggacaccatgtttcacaagatggctttacag
ctgcgggaggtgggcggagccgtcctccgccacgcccacaggcagtctcagagcattggt
ctcgaccccaacactggcatgcatctcccagaggcgccgaacaaacatggcttctgtcac
tgtacgtgggatgatgtggaccctctcctggacccagagaaccgactgcacttaacgaca
gacgagcagctgaaggccttgctggacaaactcgacatggtttcatccatgcgtaccagc
ggtggccgaaccaaacgaatccggctgctgcgccgagagattaacactatcagacagaaa
atgaaccagcagcaaagtactcagtgtgtgaatggtaatgacaaggatgatgaaggacca
gatgatgagggggaggaagaggaggaggaggaggagaaagaaaagaaatcagagaagact
gatgttgtggataatggacatttgactgcagtgtcaaactctgtgactgatgactctcca
cctgtgctggaacttacttgcccggtgtcatcaccactgccgggagatgctcctctcgag
cctcctgttctgggtattgtgactggagggcgaaggtcacccgggcgctccttcaagcgt
cagaggtcatcccgcagtgggagcaaaagccaaggtgaagacgaggctgaggtcggtgaa
acgccatcttcacaacaagaggccgttcacgaggttacgccgctgggatcgcccccgact
ctgcctttggccggagttggtcgtcgtacatctgttttgttcaagaaagctaaaaatggg
tcacggatggctaaaaacaagtccccgctgcagcagaatgggaaaacagctgacagtaaa
actaatgggctggagagcacatctgctcgtccaaaatcacccagtgtgacaaacatcaca
gctttacctcccactccaaacccctcccctgcacctccctctccctctgcacaccacctg
aggtccagaggcttcagcccagagactgaagcagacaaactccctccaccacccaaagaa
tcaggtctcacaaatggaaaacacacctctgcagaccatgatgatgacgaccaaaaatta
aactgtagtgtctccccacccaaacgtagtcggggtaaacctgcactggctaaagtcccg
agcagtgagaatggagacatctctgggtctggaaagtctacacttctgtctttagatagt
gagacagagctcgcaccactggacctagtttgggccaaatgcagaggatatccgtcatat
ccagcaatgattgtcgaccccgacatgccgcaggaagggcttcttcacaacggcatcccc
attccagtgcctcctgtggaggtgcttaaactgggcgagtggagacaaacggacgaaggc
gagaagcttttcttggtgctcttcttcgacaccaaaagaacgtggcaatggctccctcgt
gacaagctactgtcgctggggatggacgacactgtcgacaagttgcgcttaatggaaggc
aagaaacccagtgtccgcaagtctgtacacactgcgtatgaccgggccatagtacattta
aaccacgtgagaggaaatcttaacttcactccctccaattttatataa
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