Hippoglossus stenolepis (Pacific halibut): 118104503
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Entry
118104503 CDS
T08308
Symbol
nav2a
Name
(RefSeq) neuron navigator 2 isoform X1
KO
K19483
neuron navigator 2 [EC:
5.6.2.4
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsp03400
]
118104503 (nav2a)
Enzymes [BR:
hsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
118104503 (nav2a)
DNA repair and recombination proteins [BR:
hsp03400
]
Eukaryotic type
Check point factors
Other check point factors
118104503 (nav2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ubiquitin_6
CH
AAA_14
nSTAND3
AAA_25
AAA
AAA_22
NPHP3_N
AAA_16
PhoH
CAMSAP_CH
AAA_28
AAA_18
AAA_5
BrxL_ATPase
AAA_7
CH_2
RNA_helicase
AAA_24
AAA_19
ResIII
ABC_tran
Motif
Other DBs
NCBI-GeneID:
118104503
NCBI-ProteinID:
XP_047195428
LinkDB
All DBs
Position
1:3746316..3848651
Genome browser
AA seq
2546 aa
AA seq
DB search
MPAILVASKMKSGLPKPKPVHSALPIPQQTPSRPSALALPPAPVKSHIPSLGQQVGSGPP
RSKAAGSEAGENTQIYTDWANHYLAKSGNKRLIKDLQTDVTDGVLLAEIIQVVANEKIDD
INGCPKSRSQMIENIDACLSFLAAKGVNIQGLSAEEIRNGNLKAILGLFFSLSRYKQQQQ
QAQRQPSLPSQGAHPPLSQQSSAPAQLGHSPAHGTSALSAQRAAQADMQSRDGSQSKLLK
FSFGQKKTSRLPGPTTRASTAGGDIPPRGSVSAAGNRRSQGFSDKTKANSHLNKDSSEGL
TSQPSVMTEHALSSAVTVSSSTSIPAATSNLIPPSSSSTSSSSSSTAIPQPNSNSKPWRS
KSMSSKHSSSSSLSSTSTPTSAMQSVKQEKDTSCKTAAATEAPPKVVAQKSMLEKLKLFN
SKGGSKSSTSSNGAGAQTDNSAPARQLGAGQVDRVETGSNTDVLGQDDGNVRPGMNGTSN
GAAPGAGTTVSTIASSPKIALRGIAQRTFSRALTAKKSSAKGLEKEKEKEKEKEKEKEKE
KEKEKEKEKDRGKEVGKRVSVPDRTELRGEETKEEVSPVTADADSSNKRTSKIASFIPKG
GKAAKKESSTPAHSGIPKPGGKAPGVGGKASSVKEAGERPRSMRLGGGLAMHRGPLERDR
DSRHSSSTSSLASSEGKSSAAPVAGGGTTQSTASNTVSVQLPQTQQHHSHPNMATVAPFM
YRSQTDDEGTASTEGGSGGRGGDVAFTKTGQPSIEDLSGEDPETRRLRTVKNIADLRQNL
EETMSSLRGTQVTHSTLETTFDGSVTTDITSGGGGGGCSSSSNNSAGGRSILSLTSTRPS
LSSWRLGQSSPRLQAGDAPSLGNGYGGRVGSGSSQGGRYLYPGHLRRQLAGRGGAICSVE
LGDRAGEDIDLDGIAMEVTGYMSDGDVLTKNAARTDDVTSGYMTDGGLGLYTRRLNRLPD
SMAAVRETLHRKTSTGQGDADSWDDSSSVSSGISDNIDTDDINTSSSISSYANTPAAQRK
GLNAQPVTDAEKHSASTALHQAWSGDEVKRPDGGSDSGVRMEPGSKWSRRNPSDISDESD
KGGSGRKTPSASHTGSWRRGMSTQVGVTSPRTKSSSSTGSSGSIGLKGHSSGKTDDVKVS
EKGRVSPRANGLHRSPSDAGRSSGDEAKKHSISGSRASTTNVLTHTVSDPHSQTHTLTSR
TPTSTFGFKKQGHGMVTMVTASGATITSGSATLGKMPKSGARSLAGGLKASGQDGGGALG
HHDDGFLSMTARSTLQYRSLPRPSRSGAAARNGNRSSTSSIEAAVLSVTSHGKNSISLAK
ANGAGGLLANQTDREKGVSDIDNLRSGVVMQGGGAATVPLTGRQQVSSPTLRRLFGGKPG
KQAPVTTAENMKNSTVISNPHATMNHVGTVLESPDGGLGGADSETSSPLFGGRALGSGMG
TLGSEQASSPGSVYSSTGPSNSLTWGTTFSSSSAQSRESTLGGHGGAGSMGYPSVSSMHT
SSESIDMSLGSVGGGAGHGTHREDTLSALGRTGSVKTGMSESPLSSPTASPIFSRNTLPR
KQDSGTHCGRNTLPKKGLRYGPTPQMRSHEEARDWLRSHSTSGLQDSASNSPFSPGSSIT
SPSGTRFNFAQLASSPTSGAQVNIAGLRNNSLTNQDAAFDPCADNRLRNSCMSLDEKTRT
MSRSGSFRDGFEEVHGSSLSLVSSTSSIYSTNEEKSQSEIRKLRRELDASQEKVSALTTQ
LSANAHLVAAFEQSLGNMTIRLKSLTLTAEQKDSELNELRKTIELLKKQNAVAQAAINGV
INTPELTPRRDRTGSSNGSPQQQQHQHQQHHHQQHQQQQQQPDLRIRRQHSSDSVSSIAS
ATSHSSVGSNMDADAKNKKKNKKNWLRSSFKQAFSKKKSPKSASSHSDIEEMTDSSLPSS
PKLPHNGTSASGHMLRSTHSNSLLSECLDSEAEMVMQLRSELREKEMKLTDIRLEALSSA
HQLDQLREAMNRMQLEIEKLKSENDRLKVESHGSRTGSQASVSSPPPAHTNSHAAGPGLS
QHSLNLTTSESTSLDMLLDDTGGDGGMRKEGRHVKVVVTLDEDSKWGEEGRSRHFLIGCI
GVSGKTKWDVLDGVVRRLFKEYITHVDPVSQLGLSSDSVEGYNIGEIHRPSSLSAARTPE
LLPCGYLVGDSNTISIQLKGVTSENVDSLVFNTLIPKPMLQRYVSLLKEHRRVILSGPSG
TGKTYLANQLSRHLLLLEGRPLTPRAVVTFNVDHKSSKELRQYLSGLAEQCSGVPGVESP
LVVILDNLHHVSSLGEIFNGLFNCNSKHCPYIIGTMSQATSSAPNLQLHHNFRWVLCANH
MEPVKGFLGRHLRRKLIETEIGSRTRNMELVKIIDWIPRIWHHLNRFLEAHSSSDVTIGP
RLFLSCPMDVEGSRVWFTDLWNYSIIPYMLEAVREGLQLYGRRAAWEDPAAWVIDTYPWS
ATPTPAEWPPLLQLRPEDVGFDGYSAPREGVRKEPPQSDSDADPLMNMLMRLKEAATSSS
PQSYDSDSNSNSHQDDILDSSLESTL
NT seq
7641 nt
NT seq
+upstream
nt +downstream
nt
atgccagccatcctggtggcctccaagatgaagtcaggactccccaaacccaaaccggtg
cacagcgccctgcccattccccagcagacccccagcaggccgtcggctctcgctctgcct
ccggcacccgtcaagagccacatcccttcgctgggccagcaggtgggctcaggacccccg
aggagcaaggctgcagggtcagaggctggagaaaacactcagatctacacggactgggcc
aaccattacctcgccaagtcaggaaacaagcgtctgatcaaggacctgcaaacagacgtc
acggacggagtgctgctggccgagattatccaggtcgtagccaatgagaagatcgatgac
atcaatggctgccccaagagccgctctcagatgattgagaacatcgatgcctgcctcagt
ttcctggcagccaaaggagtcaacattcagggtctgtctgcagaagagattcgtaatggt
aatctgaaagccatcctcggcctcttcttcagcttgtcccgctacaagcagcagcagcag
caggcccagcggcagccgtccctcccgtcccagggcgcacacccgcccctgagccagcag
agcagcgccccggcccagctcggccactctccggcccatgggacctcggccctctcagcc
cagagagcagcgcaggccgacatgcagtccagggatggatctcagagtaaactactcaag
ttttccttcggtcagaaaaagacctctagacttcccggccccacaacgagggcgtccact
gccggcggtgacatccctccccgaggctcggtcagtgctgccgggaacagacgcagccag
ggcttcagtgacaagaccaaagccaactcgcacctgaacaaagattcctcagagggcctg
acctcgcagccttcggtgatgactgagcatgctctgtcgtctgcggtgaccgtcagctcc
tccaccagcatccccgctgctacctccaacctgattcctccctcgtcttcatcgacgtcc
tcatcctcctcgtccacagccattccccagccgaacagcaacagcaagccgtggaggagc
aagtcgatgagctccaagcactcgtcctcctcctctctgtcgtccaccagcacccccacg
tctgccatgcagtccgtcaagcaggagaaagacacctcctgcaaaactgctgcagcaacc
gaagctcctccgaaggtcgtcgctcagaagtcaatgctggagaagctcaagctcttcaac
agtaaaggaggctccaaatcttccacctcctccaatggagcaggggcccagactgataat
tctgccccagccaggcagctcggagcagggcaggtggacagagtggagaccggctccaac
accgatgtcctgggacaagatgacggtaacgtcagaccgggaatgaacggaaccagcaat
ggtgcggctccaggagcaggaacaactgtctccacaattgccagcagccccaaaatcgcc
ctgaggggtatcgcccagcggacttttagcagagctttgaccgccaagaagagctctgcc
aaaggcctcgagaaagaaaaggagaaggagaaggagaaggagaaggagaaggagaaggag
aaggagaaggagaaggagaaggagaaggacagagggaaggaggtggggaaacgcgtctcg
gtccctgacaggacagagctcaggggagaggagacgaaggaggaagtatcgcccgtcacc
gcggacgcagacagctcgaataaaaggacctctaaaatcgccagcttcattcccaagggg
ggtaaagcggcgaaaaaggagagttccacccctgcacacagcggaataccaaagccagga
ggcaaagccccgggagtcggggggaaggcctcctcagtgaaggaggcaggggagaggcct
cggagcatgcggttaggagggggtctcgccatgcaccgcggccccctggaaagagacagg
gacagcagacactccagctctacctccagcctggcctccagcgagggcaagagcagcgcc
gcccctgtggccggaggaggcaccacacagagcacagccagcaacaccgtcagcgtgcag
ctacctcagacccaacagcaccacagccaccccaacatggccaccgtcgcacctttcatg
tacagatcccaaacagacgacgagggaaccgccagcactgagggcggctcgggggggaga
ggtggagacgttgccttcaccaagaccggccagccctccatcgaggacctctcaggtgaa
gacccagagacgaggcggttgagaacggtcaagaacattgcagacctgcggcaaaacctg
gaggagaccatgtccagcctgcgaggaactcaggtcacacacagcaccttggaaaccacc
tttgacggcagcgtcaccacagacatcaccagcggtggcggcggcggcggctgcagcagc
agcagcaacaacagcgccggtggtcgcagcatcctcagcctcacctctacccggccctcc
ctgtcgtcatggcgactgggccagtccagccctcgtctgcaggcgggcgacgccccctca
ttggggaatggctatggtgggcgggtgggcagcggcagcagccagggaggacgctacctg
taccccgggcacctccgacggcagctggccggcagaggaggagccatttgcagcgtggag
ctcggagacagagccggggaggacatcgacctggacggcatcgccatggaggtcaccggg
tacatgagcgatggagacgtgctgacaaagaacgctgcacgcaccgatgatgtcaccagc
ggctacatgactgacggaggtttgggactgtacacgcggcgcctgaaccgcctgcccgac
agcatggccgccgtccgagagacgctccatcggaaaacgtcgacggggcagggagatgct
gacagctgggatgacagcagctcagtgagcagcggcatcagcgacaacattgacacagat
gacatcaacaccagctcctccatctcctcctacgccaacacgccggcggcacagcgcaag
ggcctcaacgcccagcctgtgacggatgcagagaagcactcggcctccacagcgctgcac
caggcctggtcaggggacgaggtgaagaggccagacggggggtcagacagcggggtcagg
atggagccgggctccaagtggagccgcaggaacccctccgacatttcagacgagtccgac
aagggcggctcggggaggaagaccccctctgcgtcccacacgggctcctggaggagaggc
atgagcactcaggtcggggtgacgtcccctcggactaaaagctccagcagcacgggctca
tcgggctccatcggcctcaagggccacagctcaggtaagacggatgacgtcaaggtgtcg
gagaaaggacgcgtctcccctcgcgctaacggcctccaccgctcgccctcggacgcagga
cgcagcagcggcgacgaggcgaagaaacactccatctccggcagccgcgcgtctacaacg
aacgtcctcacacacaccgtctcagacccacactcgcagacacacacgctcacctcacgc
accccgaccagcaccttcggcttcaagaagcagggccatgggatggtaaccatggttaca
gccagcggtgccaccatcaccagtggttcagccaccctggggaagatgcccaaatctggg
gcgcgctcactagcaggaggcctgaaagccagcgggcaggacggcgggggggccctgggt
caccacgacgatggcttcctttccatgactgcccgctccacgctgcagtaccgcagcctg
ccgaggcccagccgctcaggggccgccgcccgcaacggaaaccgctcctccaccagcagc
atcgaggccgccgtgctctccgtcacgtcccacggtaaaaactccatcagcctcgccaag
gccaacggcgcggggggcctcctggccaatcagacggaccgggagaagggagtctcggac
atcgacaacctgaggagcggggtcgtgatgcaggggggaggagcagcgactgttcctctg
actgggagacagcaggtttcctcacccacgcttcgcaggttgtttggtgggaagcccggt
aaacaggctccggtcaccacggccgagaacatgaagaactccaccgttatctccaacccc
cacgccaccatgaaccacgtgggcacggtgctggagtcccccgacggagggctgggaggc
gcagacagcgagaccagcagccccctgttcggaggcagggcgctgggatcggggatgggg
acgctgggcagcgagcaggcctccagccccggctcagtctactcctccaccggcccctcc
aacagcctgacctggggcaccaccttcagcagctcctccgcccagagcagggagagcacg
ctgggcggacacggcggggcgggcagcatgggctacccctccgtcagcagcatgcacacc
agcagcgagtccatcgacatgagtctgggcagcgtcggaggaggtgccggccacgggacc
cacagggaggacaccctgtccgcactgggacgcaccggcagcgtcaagacgggcatgtct
gagagtcccctctcctcccccaccgctagccccatattcagccgaaacacgctccctcgg
aagcaggacagcgggactcactgtggtagaaacactctgcctaagaagggactcaggtac
ggccccacgccacagatgcggagccacgaggaggcccgtgattggctgcgctcccactcc
accagcgggctgcaggactcggccagtaactccccgttctcccccggctccagcatcacc
tccccctccggcactcgcttcaacttcgcacagctcgcctccagcccgacctcaggagct
caggtcaacatcgccgggctgcgcaacaacagcctgaccaatcaggacgcggccttcgac
ccctgcgccgacaaccggctgaggaactcctgcatgtcgctggacgagaagactcgcacc
atgagccgctcgggctccttcagggacggcttcgaggaagttcatggatcgtctctgtct
ctggtctccagcacctcctccatttactccacgaacgaggagaagtctcagtcggagatc
cgcaagctgcgccgggagctggatgcctcccaggaaaaggtttccgccctgacgacacag
ctgagtgccaacgctcacctggtggcagcgtttgaacagagtctgggcaacatgaccatc
cggctgaagagtctcaccctgacagccgagcagaaggactctgagctgaatgagctgagg
aagaccatcgagctgctgaagaagcagaacgctgtcgctcaggcggccatcaacggagtc
atcaacacgcccgaactcacgccgagacgggacaggacaggcagcagcaacgggagcccg
cagcagcagcagcatcagcatcagcagcatcatcatcagcagcatcagcagcagcagcag
cagccagacctgcgcatcaggaggcagcactcgtctgacagcgtcagcagcatcgccagc
gccaccagtcattccagtgtgggctccaacatggacgctgacgcaaagaacaagaagaag
aacaagaagaactggctgcgaagctccttcaaacaagcgttcagcaagaagaaatctccc
aagtcggcctcgtctcactccgacatcgaggagatgacggactcgtctctcccctcgtcc
cctaagctgccccacaacggcacctcagcctccggccacatgctccggagcacacactcc
aactcactcttgtccgagtgcctggacagcgaggcggagatggtgatgcagctgcggagt
gagctccgagagaaggagatgaagctgaccgacatccgcctggaagccctcagctccgcc
caccagctggaccagctccgggaggccatgaaccgcatgcagctggagatcgagaaactg
aagtcagagaacgaccgtctgaaggtggagagtcatggcagcaggacgggctctcaggcc
tccgtctcctctcctcctcccgctcacaccaacagccacgccgcaggacctggactgtct
cagcacagcctcaacctcaccaccagcgagtccaccagcctggacatgctgctggacgac
accggcggagatggagggatgaggaaggaggggagacacgtcaaggtcgtggtcaccctg
gatgaggacagcaagtggggagaggagggtcggtctcgccattttctgatcgggtgcatc
ggcgtgagcggtaaaaccaagtgggacgtcctggacggagtggtccgacgcctcttcaag
gagtacatcacccacgtggacccggtgagccagctgggcctgagctcggacagcgtggag
ggatacaacatcggggaaatccaccggcccagcagcctcagcgccgcccgcacgcccgag
ctgctgccctgcggctacctggtgggagacagcaacaccatcagcatccagctcaaaggt
gtgaccagtgagaacgtggactcgctggtgttcaacactctgatcccgaagccgatgctg
cagcgctacgtgtcgctgctgaaggagcacagacgggtcatcctgtcgggccccagcggc
acaggaaagacctacctggccaatcagctgtcccgacaccttctgctgctggagggccga
cctctgacccctcgcgccgtcgtcacctttaacgtggaccacaagtccagcaaggagctg
cgtcagtacctgtcaggtttggccgagcagtgcagtggagtaccgggggtggagagccca
ctggtggtcattctggacaacctgcaccacgtcagctccctgggggagatcttcaacggc
ctcttcaactgcaactccaagcactgtccgtacatcatcggcaccatgagccaggccaca
tcatccgcccccaacctgcagcttcaccacaacttcaggtgggtgctgtgtgccaaccac
atggagccggtgaaaggcttcctcggccgccacctgaggaggaagctgatcgagacggag
atcggcagccgaacgcgcaacatggagctggtgaagatcatcgactggatcccacggatt
tggcaccacctgaaccgcttcctggaggcgcacagctcctccgacgtcaccatcggacct
cgtctcttcctgtcgtgtcccatggacgtggaggggtccagggtctggttcactgacctg
tggaactactccatcatcccctacatgctggaggcggtgcgggagggactgcagctgtac
ggccgcagggccgcgtgggaggacccggcggcctgggtgattgacacctacccgtggtca
gccacgcctactccagcggaatggccccccctgctgcagctccgcccggaggacgtgggg
ttcgatggctactcggccccgagggagggagttaggaaggagcccccacagagcgacagc
gacgcagacccactgatgaacatgctgatgcgtctgaaggaggcggcgacgtcgtccagc
ccgcagagctacgacagcgactccaacagcaacagccaccaggacgacatcctggactcg
tcgctggaatcgaccttgtga
DBGET
integrated database retrieval system
