KEGG   Hippoglossus stenolepis (Pacific halibut): 118104508
Entry
118104508         CDS       T08308                                 
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
hsp  Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:hsp00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    118104508
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsp03019]
    118104508
   03036 Chromosome and associated proteins [BR:hsp03036]
    118104508
Messenger RNA biogenesis [BR:hsp03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     118104508
Chromosome and associated proteins [BR:hsp03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     118104508
    COMPASS/SET1 complex (yeast)
     118104508
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR90_POC16_2nd EIF3I ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_EML WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_EIPR1 Beta-prop_Nup120_160 Beta-prop_NUP159_NUP214 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N PROPPIN
Other DBs
NCBI-GeneID: 118104508
NCBI-ProteinID: XP_035007328
LinkDB
Position
3:14796246..14800386
AA seq 315 aa
MKITDGVLRSFRVARTYSENSQKVNCVDFSPNGQHAISSSDDDCIVLYDIQEGKPKRTLF
SKKYGVDLIRYTHGDTQTVVYSSNKLDDTIRYLSLSDNKYIRYFPGHTARVIALSMSPVD
DTFISGSLDKTIRIWDLRSQNCQGLTNPLGQPVCSFDPDGLIFAAGVESQAIKLYDLRAF
DKGPFASFESRFNRVCDWTGLKFSNDGKQILISTNGGMIRVVNAFNGSVLHNFSGYNNSR
GISLEACFTPDSQFVMIGSEDGRVHVWSTESGMKVAVLDGKHPGPINTLQFNPRYMTFAS
ACTNMNFWLPCIEDL
NT seq 948 nt   +upstreamnt  +downstreamnt
atgaagatcacggacggtgtgttacggagcttccgagtggcccggacctacagcgaaaac
tcccagaaagtcaactgtgtggacttcagtccgaatggacaacatgcgatatccagcagc
gacgacgactgcatcgtgttgtatgacatccaggagggaaaacccaagcgtactctgttc
agcaagaagtatggagtggacctcatccgctacacacatggagatacacagacggtggtc
tacagctccaacaaactagatgataccatacgatacctgtctctgagtgacaacaagtac
atccgctatttccccggacacactgcaagggttattgctctctccatgtctccagtggat
gatacgtttatctcaggctcactggataagacgatccggatctgggacctgcgctctcaa
aactgtcagggtttgactaatccactggggcaacctgtttgttccttcgaccctgatggg
ctgatatttgctgcaggggtggaatcacaggccattaaactttacgaccttcgggctttc
gacaagggtccattcgcctcctttgagtcgaggtttaatcgcgtctgtgactggacggga
ctcaagttcagtaacgatgggaaacagattctcatctcaacaaacggagggatgattcgt
gtcgtcaatgcattcaatggatctgtgctgcacaatttttctggctacaacaacagtaga
ggcatctccctggaggcttgcttcactccagactcacagtttgttatgatcggctcagag
gacgggagagtccacgtttggagcactgagagcgggatgaaggtggccgtgctggatggg
aaacatccaggacccatcaacacgctgcagtttaaccccagatacatgacgtttgccagt
gcctgcacgaacatgaacttttggcttccgtgcattgaggacttgtag

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