Hippoglossus stenolepis (Pacific halibut): 118104539
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Entry
118104539 CDS
T08308
Symbol
usp4
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 4
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hsp01002
]
118104539 (usp4)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118104539 (usp4)
Enzymes [BR:
hsp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118104539 (usp4)
Peptidases and inhibitors [BR:
hsp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118104539 (usp4)
Ubiquitin system [BR:
hsp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118104539 (usp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Ubiquitin_3
DUSP
UCH_1
USP7_C2
USP7_ICP0_bdg
Choline_bind_1
Motif
Other DBs
NCBI-GeneID:
118104539
NCBI-ProteinID:
XP_035007374
LinkDB
All DBs
Position
3:complement(15820897..15833710)
Genome browser
AA seq
1038 aa
AA seq
DB search
MMAEGGGPESGGAADSDSEPVAAQMPTPSTESQKQTIGSLLKTTLRKGDEWYLIDSRWFK
QWKKYVGFDSWDMYNVGERSLYPGPIDNSGLFSDQETQSLKEHLIDELDYVLVPTEAWNK
LVGWYACLECQRPIARKVVEHGMFVKHCKVEVYLLELNLCENDNMDNLVTRHFSKADTID
TIEKEMRMLFHIPSEKETRLWNKYMSNTYEQLNKPDSTVQDAGLFQGQVLVIERKNEDGT
WPRQASHPKSSTTPSRNFTTSPKLSSNSSASISSTVANGDSSCSPEYTLNNSTSSGNRLG
SYNSYSSSYNYRESQSQPGLCGLSNLGNTCFMNSALQCLSNASPLTEYFLNDHYEAEINR
ENPLGMRGEIAEAYADLVKQMWMSRSSYVAPRTFKTQVGRFAPQFSGYQQQDSQELLAFL
LDGLHEDLNRVKKKPYLALRDAEGRQDEIVAKEAWTNHRLRNDSIIVDIFHGLFKSTLVC
PECSKVSVTFDPFCYLTLPLPMKKDRTMEVFLVRSDPQSQPTQYRVVVPKLGTVTDLCSA
LSKLCGIPSENMVVADVYNHRFHKIYRRDDGLNQIMEKDDIFVYEVQEEDSERMNLPVYF
REHHTKHAGSSTSTMLFGQPLLITVPRHNLIADVLYDKILERIGRYVKRSQSPSTESRAS
ASASASASASASASASASATASASASASASATFASCSQAAECSTSSGLNAGLGGCGSPLS
DGASCSASSSNGSNHSGNCNETNGLYDGEEEAMDHQVSPEPENGQSEEDEEETSDLENGP
KGDAAKLCPSPAKLFTFSIVNSYGTANISPLPCDGNVLKLNPHSTVAIDWDTESKKLCYD
EQEAEAYEKHESMLQPQKKKATVALRECIELFTTMETLGEHDPWYCPTCKKHQQATKKFD
LWSLPQVLVVHLKRFSYNRCWRDKLDTVVDFPIRDLNMSEFVCDPKAGPYIYDLVAVSNH
YGGMGGGHYTAYGKNKVDGKWYYFDDSSVSSASEDQIVTKAAYVLFYQRRDEEAPSKPQP
SASLGGAPEAAEDHMDTN
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgatggccgagggaggcggacccgagtcgggcggcgcggcagactcggactcggagccg
gtagccgctcaaatgccaaccccgtcaacagagagccagaaacagaccattggctcccta
ctgaaaacgactctgcgaaagggcgacgagtggtatctaatagacagccggtggttcaaa
caatggaagaagtatgtgggatttgacagctgggacatgtacaatgttggcgaacgaagc
ctctatccaggaccaattgataactctggactgttttcagaccaggagactcagtccctg
aaagagcaccttatagatgagctggactatgtccttgtacccactgaggcatggaataag
cttgtcggctggtatgcctgccttgagtgtcagagacccatcgccaggaaggtggttgag
catggcatgtttgtcaagcactgtaaggtggaggtctatctgttggagctgaatctgtgt
gagaatgacaacatggacaatctggtcacacgccatttcagtaaagctgatactatagat
actatagagaaggagatgaggatgctgttccatatcccatcagagaaggagacacgactc
tggaacaaatacatgagcaacacctatgagcagctgaacaagccagacagcactgtacag
gacgctggtctcttccaggggcaggtgcttgtgattgagcgcaagaatgaagatggcacg
tggcccagacaagcctcccatcccaaatccagtacaaccccatctaggaactttactacc
tccccaaaactctcctcaaactcatcggccagtatctcgtcaacagtagccaacggagac
agcagctgtagccctgaatatacactcaataacagcacctcatctggcaacagattgggc
agctacaattcctacagctcctcctacaactacagagagtcccagtcacagcccggcctg
tgtggtctcagtaatttgggcaacacatgcttcatgaactctgccctccagtgcctgagc
aacgcatccccactcacagagtacttcctcaacgaccattacgaggcagagattaaccga
gagaatcctctgggaatgaggggtgagatagccgaggcctacgctgatctagtaaagcag
atgtggatgagtcgcagcagctacgtggccccacgtaccttcaaaacccaggttggacgc
tttgccccccagttttcaggctaccagcagcaggactcacaggagctgttggctttcctg
ctagacgggctccacgaggatctgaaccgtgtcaagaagaagccttatctggccctgagg
gatgcagagggccgtcaagatgagatcgttgccaaggaagcctggacaaaccaccgttta
cgcaatgactccatcattgttgatattttccatggcctcttcaaatccactttggtgtgc
ccagagtgctccaaggtgtctgtcaccttcgacccattctgctacctcacactgcctctg
ccgatgaagaaggaccgcaccatggaggttttcctggtgcgatcagatcctcagtctcaa
cccacgcagtatcgagtggtggtccccaaactgggtacagtgacagacctgtgcagcgcc
ttgtccaaactctgcggcatcccttcagaaaatatggtggtggcggatgtttacaatcac
aggtttcataaaatctatcgacgggatgatggcctcaaccagatcatggaaaaggacgac
atctttgtgtatgaggtacaggaggaggacagtgagaggatgaacctgcctgtatatttc
agggagcaccacaccaagcatgctggaagctccacaagcaccatgctgtttggccagcct
ttactcatcaccgtgcccagacacaacctcatagcagatgttctatatgacaagatccta
gagagaattgggcgctatgtaaaacggtcccagagccccagcactgaaagcagggcctcg
gcctcggcctcggcctcagcatcagcatcagcatcagcatcagcatcagcctcagcaacg
gcctcggcctcggcctcggcctcagcctcagccaccttcgccagctgcagtcaggctgct
gaatgttctacatcgtctggtctcaatgccggcctgggcggctgtggcagccccctgtcg
gatggagcctcctgcagtgccagctctagcaacggcagcaaccactcagggaactgcaac
gagactaatgggctgtatgatggtgaggaggaggccatggaccaccaggtgagcccagag
ccggagaatggccagtctgaagaggacgaagaggagacctctgacttggaaaacgggcct
aaaggagacgcagccaagctgtgcccttcaccggccaagctcttcactttcagcatagtc
aactcttacggaacagccaacatcagcccactgccttgcgatggcaatgtcctcaaactc
aatccacattccacggtggcgatcgactgggacacagagtcaaagaaactgtgttacgat
gaacaggaagcagaggcctacgagaagcacgagagcatgcttcagccccagaaaaagaaa
gccaccgtggctctgagggagtgcatcgaactcttcacaaccatggagacactcggagaa
catgatccatggtattgtcccacatgtaagaaacatcagcaggccacaaaaaagtttgac
ctgtggtcgctgcctcaggttctggttgttcacctaaagcgtttctcctacaaccggtgt
tggcgggacaagctggacacagtggtggactttcccattcgggatctgaacatgtcagag
tttgtgtgtgaccctaaggccggaccttacatatatgacctcgttgctgtgtcaaaccac
tatggaggaatgggagggggtcactacacggcatatggcaagaataaagtggatggaaag
tggtactactttgatgacagcagtgtctcgtctgcctcggaggaccagattgtgacaaaa
gcagcctacgtgctcttctatcagcgcagagacgaggaagccccttccaaacctcaacct
tcggcctcgctgggaggagcccccgaagccgcggaagaccacatggacacaaattga
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integrated database retrieval system
