KEGG   Hippoglossus stenolepis (Pacific halibut): 118104557
Entry
118104557         CDS       T08308                                 
Symbol
kdm5ba
Name
(RefSeq) lysine (K)-specific demethylase 5Ba
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
hsp  Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:hsp00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:hsp01009]
    118104557 (kdm5ba)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hsp03036]
    118104557 (kdm5ba)
Enzymes [BR:hsp01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     118104557 (kdm5ba)
Protein phosphatases and associated proteins [BR:hsp01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     118104557 (kdm5ba)
Chromosome and associated proteins [BR:hsp03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    118104557 (kdm5ba)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID PHD zf-C5HC2 JmjN PHD_Pygo PHD_UBR7-like POTRA_1 PHD-1st_NSD PHDvar_NSD
Other DBs
NCBI-GeneID: 118104557
NCBI-ProteinID: XP_035007413
LinkDB
Position
3:17731123..17749427
AA seq 1489 aa
MTQPQQNEFIPPPECPVFEPSWEEFADPFAYINKIRPIAEKTGICKVRPPPDWQPPFACD
VDRLKFTPRIQRLNELEAQTRVKLNFLDQMAKFWELQGCTLKIPHVERKILDLYQLNKLV
NEEGGFDAVCRERRWTRISVKMGFAPGKAIGSHLRAHYERILYPYNLFHTGTNLPKATLT
NDTKDKEYTPHDLPQRQSVQPQETCSIARRAKRMRSERGCFKTEPGEDCENRPNLRRRMG
TFAVKPERVRMAITQVKKEPIEHEDPTEYEETLLKPIIKPPQNKVDQYMCQVCGSGTAEE
RLLLCDGCDDSYHIFCLIPPLHDVPKGDWRCPKCLAQECGKPPVAFGFEQAGRSYTLQAF
GDMADSFKSDYFNMPVHMVPTELVEKEFWRLVSTIEDDVTVEYGADIASKEFGSGFPVRN
SHFELSPEDEHYLTSGWNLNNMPVLDSSVLTHITADICGMKLPWLYVGMCFSSFCWHIED
HWSYSINYLHWGEPKTWYGVPGYAAEHLESVMKKLAPELFESQPDLLHQLVTIMNPNTLM
NNGVPIYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTMDWMPIGRNCVEHYRQLS
RYCVFSHDEMVCNMAYKAITMDVDLASAVQKEMTLMLQEEEQLRQKIKKMGVVQSKQVDY
EVLPDEERQCTKCRTTCYLSGITCACSPGKMVCLYHTHHLCSCPRSNLTLHYKFTMDELY
PMMASVKVRAESYKDWVCSVREILENKGNKKKGLEELHSLVEQVETKVFPLTSSLDQLRT
VATEADKVAAMAQQLLNGKRQTRYRSGGGKSQNQNELTVDELRSFVRQLDNLPCTIRQGP
LLKDLLTRVDDFQQRSECLLSDETPSPLELQDLLDVSLGLDVELPQLPLLRERLEQARWL
EAVQQASSWPDNLCLDTMRRLIDQGVGLAPHSSVERAMARLQELLTVSEQWEEKALSLIE
ARPCHSLETLDAALQEVDNIPAYLPNCLQLKDVVTKAKKWLHEAEALQLGGRIPVLDSLS
ELVLIAEGIPVRLNPLSRLEALVSDVQAWKESAAKTFLLKNSPFSLLEVLCPRCDVGAGH
QRSRSKKSKEPPQINKKASAKLESLCDVERALSESKDSASAMTTLAEVRQREMEILLALR
TSNESKLLPAESCSTLSVCVCQKAPSGAMVQCELCRDVFHCGCVEAAVDLEYGEAWLCPL
CQRSRKPPLDKVLPLLASLQRIRVRLPEGDALRFLIERTVQWQHRVQQACTEGVLEKVSK
MVKAGPRISSHLTQEINGSSFYTEHQSVPLQGLGHELDELMVEGFLLQVTLPETEQLYRY
LLYKLAPPSSHSSPSGKHTEQDQQSQRGSPHHNKNGGSGLKKESVNAQSKRTKRRKESSD
SQHSETAKKCRKKKFKKSKERSEETKRTSSPSHTMSDPDPAPSDSDEDYSLCAAPWCREP
EGDEVNWVQCDGSCNQWFHQVCVGLSAERAESDDYICISCTQPDYKRGE
NT seq 4470 nt   +upstreamnt  +downstreamnt
atgactcagccgcagcaaaatgagttcattcctcccccggagtgcccagtctttgagccc
agctgggaggaattcgccgacccgtttgcgtacatcaacaaaatacgacccatcgcagag
aaaactggcatctgcaaagtccgcccgccgccggattggcagccgccttttgcctgtgat
gttgacagactgaagttcacaccacggatacaaaggctcaatgaattggaggctcagacc
agagttaagctcaacttcctggatcaaatggcaaaattctgggagcttcaaggatgcact
ctgaaaattcctcatgtggaaagaaagatcttggatctttatcagctgaataagttggtg
aatgaagagggaggttttgatgcagtctgcagagagcgacgctggactaggatatccgtc
aagatgggctttgcgccgggcaaggcaattggctctcatctgcgagcgcactatgagcgg
atcctctacccatataacctgttccatactggaaccaatctgcctaaggccaccttgacc
aatgacactaaagataaggagtacacccctcatgacctgccgcagcgccagtctgtccag
cctcaggagacctgcagcattgctcgccgagcgaaacgaatgagatctgaaagaggttgt
tttaaaacggaacctggtgaagattgtgagaatcgtcccaatctcaggaggaggatggga
acatttgctgtcaaaccagagcgtgtgagaatggcgatcacacaggtgaaaaaggagccc
attgaacatgaggatccaacagaatatgaagaaactttattaaaaccgatcatcaaacct
ccccagaataaagtggaccagtacatgtgccaggtatgtggcagtgggaccgctgaggaa
cgcctgctgttgtgtgacggctgtgatgacagctaccacattttctgtctgatccctccc
ctccacgatgttcccaaaggcgactggagatgtcccaagtgcctggctcaggaatgtggc
aaacctcctgtcgcttttggcttcgagcaggccggcaggagctacaccctccaggccttt
ggagacatggccgactccttcaagtcggattatttcaacatgccagttcatatggttccc
acagagctggtggagaaggagttctggcgtctcgtcagcaccatcgaggatgacgtcacc
gtggagtacggagcagatattgcctccaaggagtttgggagtggtttccctgtgaggaac
agccattttgagctctctcctgaggacgagcattacctgaccagtggctggaacctgaac
aacatgccggtgctggacagctcggtgctgactcacattacagccgacatctgtgggatg
aagttaccatggctgtatgtgggaatgtgcttctcctccttctgctggcatattgaggac
cactggagctactccataaactatcttcactggggggagccaaagacgtggtacggggtc
cctggttacgctgcagagcacctcgagtctgtcatgaagaaactggcccctgagctgttt
gagtcccagccagatcttcttcaccagctggtcaccatcatgaatcccaacacactgatg
aacaacggcgtcccgatctatcgcaccaaccagtgtgcaggcgaattcgtcatcaccttt
cccagagcttaccacagtggattcaaccagggtttcaactttgctgaagccgtcaacttc
tgtacaatggattggatgcccattggccgtaactgtgtggaacactatcgccagctgagc
aggtactgtgtcttctcacatgacgagatggtttgtaacatggcctataaagcaatcacg
atggatgtggacctggcgtcagcagtgcaaaaggagatgacgctcatgctccaagaagaa
gaacaactaagacagaagattaaaaaaatgggtgtggtgcaatcaaagcaagttgattat
gaggtgctcccagacgaggaacggcagtgcacaaagtgtcggaccacctgctacctgtct
ggcatcacatgcgcttgtagtcccggcaagatggtttgtctgtaccacacccaccatctc
tgctcgtgtcctcgcagcaacctcacactccattacaagtttacaatggatgagttgtac
cccatgatggcatcagtgaaggtgcgtgcagagtcgtataaagactgggtctgtagtgtt
cgggagatcctggagaacaaaggaaacaagaaaaaaggtttggaagagcttcatagtttg
gtggaacaggtggagacaaaggtgttcccactcaccagctccctggatcagctccgcacc
gtcgccacagaggcggataaagttgctgcgatggcacaacagcttctcaatggaaagaga
cagacgaggtatcgttctggaggaggaaaatctcaaaaccagaacgaattgactgtggac
gagctgaggtctttcgtccgacagttggacaacctgccgtgtacaatccgacagggtccg
ttactgaaggacctattgacccgggtggatgacttccagcagcgcagtgaatgtctcctc
tctgacgagactcctagcccactggagctgcaggacctgctggatgtgagtctgggcctg
gacgtggagctaccccagctgcccctgctgagggagagactggagcaggctcgctggctg
gaggccgtgcagcaggccagcagctggcccgacaacctctgtctggacaccatgaggagg
ctgatagaccagggcgtgggtctggcccctcacagctccgtggagagagccatggctcgt
ctgcaggagctgctgacggtgtcggagcagtgggaggagaaggctctcagcctcatcgag
gctaggccatgtcacagcttagaaactcttgacgctgctctacaagaagtagacaacatc
cctgcttatctgcccaactgtctgcagctgaaggacgtcgtcaccaaggccaagaagtgg
ctgcatgaggctgaagctctccagctcgggggacgtattcctgtgctggacagcctctct
gagctggttctcatagcggagggcatcccagtgaggctcaacccactgagtcgtttggag
gccctggtcagtgacgttcaggcctggaaggaaagcgcagcaaagacattcctactgaaa
aactcccctttctctctccttgaggtgctttgcccaagatgtgacgtaggggccggacat
cagaggtcaagatctaaaaaatctaaagagcctccacagataaataaaaaagcttcagca
aaactggagtctctgtgtgacgtagagagagcgctttctgagagcaaggactccgcctct
gctatgaccacgctcgctgaggtccgtcagagggagatggagatcttgttggcgttgagg
acttcgaatgaatccaagcttcttcctgctgaaagttgttccacactcagtgtttgtgtt
tgccagaaggccccttcaggtgccatggtgcagtgtgagctctgtcgagacgttttccac
tgtggctgtgtggaagcggccgtcgaccttgagtacggagaagcctggctttgccctctt
tgccagcggtcgagaaaaccacctctggacaaggtcctgccgctgctggcttcactgcag
aggatccgggtgcgacttccagagggagacgctcttcgcttcctcatcgagaggacggtg
cagtggcagcatagagtacagcaggcatgcacagagggagttctggagaaagtgtcaaag
atggtgaaagctggacccagaatatcttcacatctgactcaggaaataaatggttcatct
ttttatacagagcaccagtctgttccgctccagggacttggtcatgagctggatgagctg
atggtggagggcttcctgctgcaggtcactctgcctgagaccgagcagctgtacagatac
ctgctgtataaactggcgcccccatcctcacacagctcccccagtgggaagcacacagaa
caggaccagcagtctcagagagggagcccccatcacaacaagaatggaggctccggtctc
aaaaaggagtcggtgaacgctcagagcaaaaggaccaagcgacgtaaggaaagctccgac
tctcagcacagtgagactgccaagaagtgtcgcaagaagaaattcaagaaaagcaaagag
aggagtgaagagaccaagaggacaagttctccttcacacacaatgtctgaccctgaccct
gctccatcagactctgacgaggattactcactgtgtgctgcaccatggtgcagagagcca
gagggggacgaggtgaactgggtccagtgtgacggcagctgtaaccagtggttccaccag
gtctgcgtgggactttctgctgagcgagcagagagcgacgactatatttgtataagctgc
acacagccagactacaaaagaggagaatga

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