Hippoglossus stenolepis (Pacific halibut): 118104597
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Entry
118104597 CDS
T08308
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp00260
Glycine, serine and threonine metabolism
hsp00630
Glyoxylate and dicarboxylate metabolism
hsp00670
One carbon pool by folate
hsp01100
Metabolic pathways
hsp01200
Carbon metabolism
hsp01230
Biosynthesis of amino acids
hsp01240
Biosynthesis of cofactors
hsp04981
Folate transport and metabolism
Module
hsp_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
118104597 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
118104597 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
118104597 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
118104597 (shmt2)
Enzymes [BR:
hsp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
118104597 (shmt2)
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GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
118104597
NCBI-ProteinID:
XP_035007492
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Position
3:complement(10295215..10317502)
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AA seq
501 aa
AA seq
DB search
MLSFTLRRLTRPLCHRAPLLASVRGQQSHAATHTANEDRPWTGQDSLAQDDPEMWYLLQK
EKDRQCRGLELIASENFCSRAALEAQGSCLNNKYSEGYPGKRYYGGAEVVDQIELLCQKR
ALEAFDLDPYLWGVNVQPYSGSPANFAVYTAVLNPHDRIMGLDLPDGGHLTHGYMSDVKR
ISATSIYFESMPYKLNIATGLIDYEQLELTAKLFRPKLIIAGTSAYARLIDYARIKKLCT
DIKAYMLADMAHISGLVAAKAIPSPFEYADLVSTTTHKSLRGARAGLIFYRKGVRSVDKK
GKEIMYDLEDKVNFSVFPSLQGGPHNHAIAGVAVALKQANSPMFKEYIAQVLKNSKTMAT
ALLSKGYTLVSGGTENHLVLVDLRPKGIDGARAERVLELASITANKNTCPGDKSALTPGG
LRLGAPALTSRQFKEGDFVQVVEFMDEGFKIALDVKKKTGKLQDFKNFLLQDPETVARIA
DLRHRVEAFARPFPMPGFDDH
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccttcacgctgaggcggctcacacggcctctgtgccacagagcccctcttctt
gccagtgtacgtgggcagcagtcccacgctgccacccataccgcgaatgaagatcgtcca
tggacaggccaggatagcctggcccaggacgaccctgagatgtggtatcttctgcagaaa
gagaaggacaggcagtgccgaggcttggagctcattgcgtctgagaatttctgcagccga
gcagctctggaagctcagggctcctgtctgaacaacaaatactctgaaggctacccaggg
aaaagatactacggcggagcagaagtggtcgaccaaattgagcttctgtgtcagaagcga
gccctggaggcctttgacctggacccatatctgtggggtgtcaacgttcagccatactca
ggctcacccgctaactttgccgtctacacggccgtcctcaacccccacgaccgcatcatg
ggcctggacctgcccgacggaggacatctgacccatggctacatgtctgacgtaaagagg
atctcagcaacctcaatctattttgagtccatgccatacaagctaaacattgcaacagga
ctcatagactacgagcagttggagttgacggccaagctgttccgacccaagctcatcatc
gctggcaccagcgcctatgcccgcctcattgactacgcccgcatcaagaagctgtgtact
gacatcaaggcctacatgcttgctgacatggcccacatcagcggtctggtagcagccaaa
gccatcccctctccctttgaatacgctgacctggtctcgactaccacacacaaatccctc
cgtggagccagggctggcctcatcttctaccgtaagggggtgcgctcagtggacaagaag
gggaaagagatcatgtatgacctcgaggacaaggtcaacttctctgtcttcccctcgctg
cagggtggacctcacaaccacgctatcgctggtgtggctgtggcactcaaacaggctaat
tctcccatgttcaaggagtatattgcccaggtgttgaagaattctaagacaatggccaca
gctcttctcagtaaaggctacaccctggtatcaggcgggaccgagaaccacctggtcctc
gtggacctgcggcctaagggcattgacggagctcgagccgagagggtgctggagctcgcg
tccatcactgccaataagaacacctgccctggggacaagagcgccctgactcctggtggc
ctcaggctaggtgctccagccttgacatccaggcagttcaaagaaggagactttgtacaa
gtggtggagttcatggacgagggctttaagattgcgttggatgttaagaaaaagacagga
aagctccaagacttcaagaactttcttctccaggacccagagactgtggctcgcatcgct
gacctacgccaccgcgttgaagcttttgccaggcccttccccatgccaggcttcgacgat
cattag
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