KEGG   Hippoglossus stenolepis (Pacific halibut): 118104623
Entry
118104623         CDS       T08308                                 
Symbol
hcfc1a
Name
(RefSeq) host cell factor 1a isoform X1
  KO
K14966  host cell factor 1
Organism
hsp  Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03083  Polycomb repressive complex
hsp04980  Cobalamin transport and metabolism
hsp05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:hsp00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    118104623 (hcfc1a)
 09150 Organismal Systems
  09154 Digestive system
   04980 Cobalamin transport and metabolism
    118104623 (hcfc1a)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    118104623 (hcfc1a)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:hsp01009]
    118104623 (hcfc1a)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hsp03036]
    118104623 (hcfc1a)
   03029 Mitochondrial biogenesis [BR:hsp03029]
    118104623 (hcfc1a)
Protein phosphatases and associated proteins [BR:hsp01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     118104623 (hcfc1a)
Chromosome and associated proteins [BR:hsp03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    NSL complex
     118104623 (hcfc1a)
   HMT complexes
    COMPASS/SET1 complex
     118104623 (hcfc1a)
    MLL-HCF complex
     118104623 (hcfc1a)
   Polycomb repressive complex (PRC) and associated proteins
    PR-DUB complex
     118104623 (hcfc1a)
Mitochondrial biogenesis [BR:hsp03029]
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Other regulator of mitochondrial biogenesis
    118104623 (hcfc1a)
SSDB
Motif
Pfam: Kelch_3 Kelch_5 Kelch_4 Kelch_1 Kelch_6 fn3
Other DBs
NCBI-GeneID: 118104623
NCBI-ProteinID: XP_035007516
LinkDB
Position
3:complement(24065717..24079442)
AA seq 1740 aa
MSAPGSAVSGTTAAVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDEL
HVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWE
WKKLKAKNPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELR
AGSSVVGWDIPITYGVLPPPRESHTAVVYTEKTSRKSRLIIYGGMSGCRLGDLWTLDIDT
LTWNKPSVSGTAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACL
NLDSMCWETVLMDTLEDNIPRARAGHCAVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYL
ETERPHAPARVQLVRANTNSLEVSWGAVSTADTYLLQLQKYDIPATPAAASPVMSATPSQ
PVNSPRSPALAVAAPSAQSLPQTAILKVAAQQSATGTSVVTVRPSQPGKSPITLTSLPPG
VRMVVPAQTTQGSVRKQFATHLVPIGSSPQMSGMAALAAAAAATQKIPPSSAGTLLNVPA
GATILKTVAVSPGTTTVKMASPLMVSNPATRMLKTAAAQVGTATASSPTTTRPIITVHKS
GAVTVAQQAQVVTTVVGGVTKTITLVKSPLTMGSGGTLISNLGKMMSVVQTKPVQTAISG
QGSTNPLAQLIQTKGPLPAGTILKLVTSADGKPTTIITTSQAGGTGHKPTILNISGVSPT
TKQGTTIIKTIPMSAIMSQSGATGVTSSAGMKTPITILTTKVMTTGTPGKIITAVPKLAT
AAGQQGLTQVVLKGAPGQPGTILRTVPMSTVGGVRLVTPVTVSAVKPTVTTLVVKGTTGV
TTLGTVTGTVSSSLAGGTVDSSKASLVTPITTLGTISTLSSQVISPAAITVSAAQTSLTS
ASTLASSTITVQNQPTQVTLITTPSGVEAQPVQDLPVSILASPTSEQPSSTEAGAAGEGS
GTVTLVCSNPPCETHETGTTNTATTSSATIGAGQVCSNPPCETHETGTTNTATTSSATIG
ARQVCSNPPCETHETGTTNTATTASSNMSALRMCSNPPCETHETGTTNTATTASANMGGS
QQVCSNPPCETHVTGTTNTATQASSNMNAGQTGTVQRVCSNPPCETHETGTTNTPSTATS
SMGGDQTNTATGTVQRVCSNPPCETHETGTTNTATTATCSMETGEGTAAQQTEEGTEGTS
STEVASTTAATGVATAGVAAATAAAATAAATTTTTTQGRAITTVTQSTPAPGPSVPSISS
ITEGVSTAASSTEEPMQTNEAVSAEAAPAEEGATAMETQAEVNTGEAAATDLNLPSELMS
EGQGATLMVTGLSDEELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVMHEGDSAGE
SQQPTNIPIMLTQQELAALVQQQQQLQEAQAAAQQATVDASLPTEGLAPADSLNDPSVES
NGHNEMAAAVTSAVASLLPRTTAETLAPSSTFAPSVSVASPAKLQAAAALAEVANGIEGE
KQAPQPTPVKPVVKKENQWFDVGIVKVTNMVVTHFYVPADDSHGDDDSGVMPDYSQMKKM
ELQPGTAYKFRVAGINACGRGAFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPS
VTSGKIIEYSVYLAIQSNQTAEAKASTPAQLAFMRVYCGPNPSCLVQSSSLSNAHIDYTT
KPAIIFRIAARNEKGYGPATQVRWLQESGKDAASAKPAPKRPGTSPDTKATGPKKARTDQ
NT seq 5223 nt   +upstreamnt  +downstreamnt
atgtctgcccctggctccgcggtgtctgggaccacggcggcggttctgcagccgcggtgg
aagcgggtcctcggatggtccggtccagttccccggcccagacatggacacagagctgtg
gctataaaggagcttatggttgtctttggtggtgggaacgaagggatcgtggatgaattg
catgtatacaacaccgcaacaaaccagtggtttatcccagcagtccgtggtgatatcccc
cctggttgtgctgcgtatggttttgtctgtgatggcacaagattgctggtgtttggtgga
atggtggagtatggaaagtacagcaacgatctctatgaactacaggccagcagatgggaa
tggaagaaattgaaagcaaaaaacccaaagaatgggccccctccttgtcctcgtcttggc
cacagtttttccctggttggcaacaagtgctacctgtttggtggattggccaatgacagc
gaggacccaaaaaacaacattcccagatacctaaacgatctgtacacactggagcttcgt
gctggttccagtgtggttggatgggatattccaatcacctacggagttttgcctcctccc
cgtgagagccacactgctgtggtttacacagaaaagacgagcaggaaatctcgcctcata
atctatggagggatgagtggatgtcgtcttggagatctgtggacactcgatattgatacc
ctgacatggaacaaaccatcagtaagcggcacagcgccacttcccagaagtcttcactct
gccaccaccatcacaaacaagatgtatgtttttggaggatgggttcctctggtgatggat
gatgtcaaagtggccacacatgagaaagagtggaagtgcacaaacactctagcctgccta
aatcttgattccatgtgttgggagacagtgttgatggatactctggaagacaatatcccc
agagcccgtgcgggccactgtgctgtggccatcaattccagactttatgtttggagtggc
cgtgatggttatcgtaaagcttggaacaaccaagtctgctgtaaagacctctggtacctg
gaaacagagcggccacatgcccctgccagggtgcagttagtccgtgccaacacaaactcg
ctggaggttagctggggtgcagtctccactgctgacacctacttattgcagctacagaag
tatgacatcccagcaactccagctgcagcctcacctgtcatgagcgcaaccccttctcag
cctgtgaactctccaaggagccctgccctggctgtagcagcaccctctgctcagagcctg
ccacagacagctattttgaaagttgcagcccagcaatctgcaacaggcacatctgttgtc
acagtccgccccagccagcctgggaaatcccctatcactttgacatctcttcctccaggt
gtccgaatggtagtgccagcccagaccacccaaggatcggtacgcaaacaatttgcaacg
catcttgtcccaattggcagtagtcctcagatgagtggcatggcagctttagctgcagca
gccgcagcaacacagaagatccctccctcctctgcaggcaccttactcaatgttcctgcg
ggtgccaccattctcaaaacagtagccgtttcccctggcacaaccacagtgaaaatggcc
tctcccctcatggtcagtaacccggccacccggatgctgaagactgctgcagctcaggtg
ggcacagcaactgcgtcctctcccaccaccacccgacccatcatcactgtgcacaagtct
ggtgcagtcacagtagcccagcaggcccaggtggtaaccactgttgtgggaggagtcact
aagaccatcaccctggtcaagagtcccctcaccatgggcagcggtggcactctgatctcc
aaccttggcaagatgatgtctgtggtacaaaccaagccagtgcagacagctatctctggc
cagggttcaactaaccctctcgcacagctcatacagacaaagggtcccctcccagcaggc
accatcctgaagcttgtgacctctgctgacggcaagcccacaaccatcatcaccacttcc
caggctggaggcacaggacacaagcccactatcctcaacattagcggcgtctctcccacc
actaagcagggcaccaccatcattaagactatccccatgtcggccatcatgagccagtcc
ggagccacaggtgtgacaagcagtgcaggcatgaaaacgcctatcacaattctgaccacg
aaggtgatgaccactggaactcctggtaaaatcatcactgccgtgcccaaacttgctact
gcagccggccagcagggactgacacaggtggttttgaagggggcccccggacaaccagga
accattttgcgtactgtgcccatgagcacagtgggtggtgttcggcttgtaacacctgtg
acagtgtctgctgtgaagcccactgtcacaactctggttgtgaaggggactactggtgtc
accactcttggaacagtcactggcaccgtctccagcagcctggcaggaggcacggtggac
agttccaaagcctctctagtcacccccatcaccacgctaggaaccatctcgaccctgtcc
agccaggtcatcagcccagctgccataactgtgtcagctgctcagaccagcctgacctct
gcctccactctggcctcctctaccatcacagtgcagaaccagccaacccaggtgacttta
atcacaactccgagtggagtagaagctcaaccagtgcaggatctaccggtttccatcctg
gcttcaccaacctccgagcagcccagttccactgaggctggagcagctggagagggatct
gggaccgtcaccctggtctgctccaacccaccctgtgaaacccacgagacaggaaccacc
aacacagccaccacctcctcggccacaattggagctggacaggtctgctccaacccacct
tgtgagacccatgaaaccggaaccaccaacacagccaccacctcctctgctacgattgga
gccaggcaggtctgttctaacccaccatgcgagacccatgaaacgggaaccaccaacaca
gccacaactgcatcctcaaacatgtctgcgctccgtatgtgctccaacccaccatgcgag
acccacgaaactgggacaactaacacagctaccacagcatccgctaacatgggtgggtcc
cagcaggtgtgctccaatccaccctgtgagacccacgtgacaggaaccaccaacacagcc
actcaggcatcgtctaacatgaacgcaggccagacaggcaccgtgcagagggtgtgctcc
aacccaccctgcgaaacccatgagacagggaccaccaacaccccatctacagcaacctcc
agtatgggaggcgaccagaccaacacagcaacagggacggtccagagggtgtgctccaac
ccaccctgtgaaacacacgagaccgggaccaccaacacagccaccactgccacctgcagc
atggagacaggcgaaggcacagcagcccagcagacagaggaaggaactgaaggtaccagc
agcacagaagtggcctctaccactgcagcaacaggcgtagccactgccggcgtagccgcc
gccaccgctgccgcagccaccgcagccgccaccaccaccaccaccacccagggcagggcc
atcactactgtcactcagtctacaccagccccagggccctctgtaccatcaatttcatca
atcacagagggtgtgagtactgccgccagctctacagaggaaccaatgcaaactaatgag
gcagtatcagcagaagctgcaccagcagaggagggagctactgctatggagacacaagca
gaagtaaatacaggagaagcagcagcgacagatttgaacctgccctcagagctgatgtct
gagggtcagggagctacacttatggtgacagggctgtcggacgaggagctggctgtgacc
gcagcagcagaggccgctgctcaggcagcagccactgaagaagcccaggccctcgctatc
caggctgtcctccaggcagctcagcaagctgtaatgcatgaaggcgattcggctggagag
agccagcagcccacaaacatccccatcatgctgacccagcaggagctcgcagctctggta
caacagcagcagcagctgcaggaggctcaggctgcagcccagcaggccaccgttgatgca
agcttacctactgaaggcctcgcccctgccgacagcctcaatgacccctctgtcgagagc
aacggacacaacgagatggctgccgcagtcaccagtgctgtagcatctctgctgccacgt
actactgctgagacacttgctccatcaagcacctttgcaccctctgtgtcggtggcaagt
ccagccaagctgcaagcagcagctgctctagcagaagtcgccaatggcatagagggagag
aagcaagctcctcagccaaccccagtgaaaccagttgtaaagaaagagaatcagtggttt
gatgttggaatcgtaaaagtgacaaatatggttgtcacccacttctatgtgccagcagat
gattctcatggagatgatgactctggtgtcatgccagactacagccagatgaagaaaatg
gagttgcagcctggaacagcttataagttccgtgttgctggaatcaacgcttgcggtcgc
ggagcgttctcagagatttcagctttcaagacttgcttaccaggcttcccaggggcccct
tgcgccatcaaaatcagcaagagcccagatggtgcccacctgacctgggagccaccctct
gtgacatcagggaagatcatcgaatactccgtgtatcttgccatccagagcaaccagaca
gctgaagccaaggcctccaccccagcccagctagccttcatgcgggtgtactgtggaccc
aacccgtcgtgcttggtgcagtcgtccagcctctccaacgcccacatcgactacaccacc
aagcctgccatcatcttccgcatcgccgcccgcaacgagaagggctatggtcctgccacg
caagttcgatggctgcaagaatctggcaaagatgctgcctcagcaaaaccggcccccaaa
agaccaggcacctctcctgatactaaggctactggtccaaagaaagcaaggacggaccag
tga

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