Hippoglossus stenolepis (Pacific halibut): 118104756
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Entry
118104756 CDS
T08308
Symbol
igdcc4
Name
(RefSeq) immunoglobulin superfamily DCC subclass member 4
KO
K22657
immunoglobulin superfamily DCC subclass member 4
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hsp04515
]
118104756 (igdcc4)
Cell adhesion molecules [BR:
hsp04515
]
Immunoglobulin superfamily
DCC/UNC5 family
118104756 (igdcc4)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Ig_3
I-set
Ig_2
ig
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
V-set
Fn3_VIN3
C2-set_2
Adeno_E3_CR2
Ig_ILCR1
Motif
Other DBs
NCBI-GeneID:
118104756
NCBI-ProteinID:
XP_035007766
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All DBs
Position
1:complement(21414132..21467368)
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AA seq
1257 aa
AA seq
DB search
MAVETIWLLCLLSLLSGPSEQEKPVSVELSCGAGPSHVVLEPGLPLLLDCNLGASETPFN
VTWLQDGQTLPPEGHHLQYLANGSLLLLPTSKDGQPAQRLEGGYSCMSASAAGALTSRTV
NVLLAGLSKFHQEPSPQTVPAGGAARFECQIEGVPTPVITWEKNKVAVPEETRFISLPNG
VLQILEVTKEDEGAYRCVASNSARKDISHEALLTVTTGSTEALNRVVIVAPPQNATVVLG
RPAVMECMAQGQPKPLVSWSRQDGKPISTDVVVLATNLVIRDTRRHHAGVYVCRANKPKT
REFVIAAAELHVPAPPVILQPPETASLSRGNTARFVCNSSGEPPPVLHWLKNGKPIKPFR
QVKTQSPGLLLINQLAPDDSGYYQCIADNGLGTACATAKLTVIVREGLPSPPRHLSATPY
SSTSALLTWEKPEYNSDQIIGYSVHCQRAAGSDNVEYQFAMNNDTTEYHVKELLPHTAYR
FFVVAYSPLGASPRSLPITVEMLEDVPSAPPQLSIASTSPTDIRLMWHPLSSQYSRGAVT
RYRIEYSSLDQVETVFSVEVGGNETQFTLRELQPNQAYQLRIAAGTGVGFGVPSEWAQHQ
TLAHYNHSDHSMVIFAPTELKIRARVNTLNVTWHPSPNHTLVSGYKLSCREVETEESATG
EKRATQTHTIRLRKKARYHLLTGLAPDRQYEVRVWAFNKHIDGAAAMWNGRTDKAHDRTS
SPPMRPPPMPPSSIQAKANSSTSIWLRWEKPRFSNVRIINYTVRCSPAGTTNASLVSYHT
SSAQEMLLGALRPFTRYELAVQSNAVDVVGPFSGTVEESTLSDRPSTAPEELQLSALDSS
SVLVSWRPPLEPNGVIISYVILYSGNLSQPEHLWNNLSQDGSITSMEVQGLSSGTNYFFK
LGASTVVGSGPYSPVMDVHTALQKYELDIHAVTGIIVGVCLGLICILLCMCFSFRNGKSR
EISGGLDSTAVSPQYRRGGFPIPSNLPECSDSHELETLMPPGSQESGQPLAEAPEEQSLM
ASANPVEGEDAPAPEPKAAWNGSVSHNWANRITRYRDTIAEDCPALINGAVNMLITENGM
GSDGHLCTSLCSNQVEAEVIVHSELSDLGREREEEGSEREGDSNTTRGPSLSEDRYSPLS
EPSLPGEEERLEKLSLAQRPSSFPSIKLVGNHNGELEGTGDQPIVNVQPQQDTGLTNGFH
SPKTVRSVLRSEHLGNGDSRHRPPAPGKVISVGLSPSPFVSSGLVHSTSAAHSYLCP
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggagactatttggctgctctgtcttctttcgctgctttctggtccatccgag
caagaaaagcctgtttccgtggagctgagctgtggggctgggcccagccatgtagtgttg
gaaccaggtttgcccctcttgctggactgcaatctgggggccagcgagacacctttcaat
gtcacctggctccaggatggccagaccctgcctccggaggggcatcacctgcagtatctg
gctaacggatccctcctcctgctgccgacctccaaggacggccagcccgcccagaggttg
gaggggggctacagctgcatgagtgccagtgccgctggagccctcaccagcaggactgtg
aatgtgctcttggcaggtctgtctaagttccaccaagagccgtcaccccagacagtccct
gctgggggcgctgcccgcttcgagtgccagattgagggtgtacccacacctgttataacc
tgggaaaagaacaaagtggctgtccctgaggagaccaggttcatttcccttcctaacggg
gtgctccagatccttgaggtgaccaaggaagatgagggtgcctaccgctgtgtcgcctct
aactctgcccggaaggacatcagtcatgaggctctactcactgtcaccacaggttctact
gaagccctgaacagagttgtgatagttgcaccacctcaaaatgccacggtggtgctgggc
cgccccgcagtgatggagtgcatggcacaaggccagccgaagcctctggtgtcctggagc
agacaagatggaaagcccatttccactgatgtggtcgtcctcgcaacaaacctggtgatt
agggacacgagacgtcaccatgccggcgtctatgtctgccgggccaacaagcctaagacc
agagagtttgtcattgctgccgctgagctgcacgtgcctgcccctccagtgattctccaa
cccccagagacagcgtccctgtcccgggggaacacagcccggtttgtgtgcaacagctca
ggggagcctccccctgtgttgcactggctgaagaatggcaaacccatcaagccattcaga
caagtgaagacccaaagccctggactcctgctcatcaaccagctggcaccggatgattca
ggctactaccagtgcatagcagacaacgggctgggcacggcctgtgccactgccaagctc
actgtcattgtgagggaaggtctgccaagccctccacgtcacctgtctgccacaccctac
tccagcacatctgccctgctcacctgggagaaaccggagtacaactcggaccaaatcata
ggctactctgtgcattgccagcgtgccgcaggctcagataatgtggagtaccagtttgcg
atgaacaatgacaccacagagtatcacgtcaaagagcttctcccgcacactgcctacaga
ttctttgtggttgcctactctcccctgggggccagtccacgatccctgcctataactgta
gagatgctggaggatgtgccgagtgcacccccccagctctccatagccagcacctcccct
acagacatcaggctgatgtggcaccccctgtcctcacagtacagtcgaggagccgtcacc
cgctaccgcatcgagtacagctccctggatcaggtggaaactgtattctcagtggaggtg
gggggtaatgagactcagtttacactgagagagctgcagcccaaccaggcgtaccaactg
aggattgcagctggaacaggcgtcggctttggggtcccatcagagtgggcccaacaccag
acattagctcactacaaccacagtgaccacagcatggtgatctttgcccccactgagctg
aaaatcagagccagagtgaacacgctcaatgtgacatggcatccctcacccaatcacacc
ctggtgtctggctacaagctgtcctgccgagaggtcgagaccgaggagtcggccactggt
gagaagagggcgacacaaacccacaccatcaggctccgaaagaaggcgaggtatcatctg
ctcactggactggcccctgaccggcagtatgaggtgagggtctgggcattcaacaagcac
atcgatggagcagctgcaatgtggaacggaagaacagacaaggcccatgacagaacatcg
tcgccacccatgcgcccccctccgatgcccccaagcagcatccaggccaaagccaacagc
tccacctccatctggctgcgctgggagaaacctcgtttcagcaatgtacgaatcatcaac
tacacagtgaggtgcagcccagcgggaaccaccaacgcctccctggtctcctatcacacc
agttctgctcaggagatgctgctcggggccctgaggcccttcacccgttatgagctggcg
gtgcagtctaatgcagtggacgtggtgggacccttcagcggcaccgttgaagagtccacc
ttgtctgaccggccctccacagctccggaggagctgcagctgagtgctctggactcctcc
tctgtgctggtgagctggcgccctccactggagcctaacggtgtcatcatcagctacgtg
atcttgtacagtggcaacctcagccagcctgagcacttgtggaacaatctctctcaggat
gggagcattaccagcatggaggtccagggtttgtccagcggcaccaactactttttcaag
ctgggagcctctactgtggtggggtcagggccttattcacctgtaatggatgttcacact
gcccttcagaaatatgagctggacatccacgcggtgacaggcatcatcgtaggcgtgtgt
ctgggactgatatgcatcctcctctgcatgtgcttcagctttcgtaatggcaaatccagg
gagatatctggggggctggactccacagctgtgtcccctcagtacaggagaggaggtttc
cccatcccctccaacttgccagagtgcagcgatagccacgagctggagacactgatgccc
ccaggcagccaagagtctggtcagccgctcgcagaggccccagaggagcagagcctgatg
gcaagtgctaatccagtggaaggggaggatgcccctgcacctgagcccaaggcggcttgg
aacggctctgtgagtcataactgggccaacagaatcactagatacagagacaccatagca
gaggactgtccagcactcattaatggagctgtcaacatgctgatcactgagaacggcatg
ggctcagacggtcatctgtgtacgtctctgtgcagtaaccaggtcgaggcagaagtgatt
gttcactcagagctgtcagatctcgggagggagagagaggaggagggcagcgagagggag
ggggactctaacaccaccaggggaccctcattatcagaggacagatattcccctttgagc
gagccaagtctgccaggggaggaggaacgtctagaaaaactatcgctggcccaaagaccc
tcgagttttccctcaatcaagttggtgggtaatcacaacggggagctggaaggcacagga
gaccagccgattgtgaacgtgcagccccagcaggacacggggctcaccaatggcttccac
tccccgaagactgtgaggtctgtgctgaggtcagagcatttgggaaacggcgactccaga
caccgccctcctgcaccggggaaggtcatctctgtcgggctgtccccttccccctttgtc
agctccggcctcgtacactctacctcagcagcacacagttatctgtgcccgtag
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