Hippoglossus stenolepis (Pacific halibut): 118104774
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Entry
118104774 CDS
T08308
Symbol
trpc4apa
Name
(RefSeq) transient receptor potential cation channel, subfamily C, member 4 associated protein a
KO
K11796
Trpc4-associated protein
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hsp01009
]
118104774 (trpc4apa)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118104774 (trpc4apa)
Protein phosphatases and associated proteins [BR:
hsp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118104774 (trpc4apa)
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
118104774 (trpc4apa)
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3689
Translin
Motif
Other DBs
NCBI-GeneID:
118104774
NCBI-ProteinID:
XP_035007774
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Position
3:23913406..23926256
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AA seq
774 aa
AA seq
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MATLLGSESPCTGGKRRHCRSNIVKKFTASKITGQGFSQGTQLPVGLLQERDKRAKWNGI
PTVLQKLYESSNPNSDLSHAHSFLKVLSSQLSVEAMSFVTEDRKTAQESTFPNTHTFDLF
GGVDLLVEILMRPTLTMQKKKPKMNDDLVKDCLSVLYNCCICTEGVTKCLAARDDFVLFL
FTLMTNKKTFLQTATLIEDILGVKKEMIQLEGIPNLSGLVQSFDQQQLANFCRILSVTIS
EPDVGNDDKHTLLAKNAQQKRNAIPSRAEVNQVTLLNIPGFIERLCKLATRKVSEATGAN
FLQELEDWYTWLDNALVLDALMQMATEEAEQSSTESSDESSLATSPLRHRLPQSMKTVHE
IMYKVEVMYVLCVLLMGRQRNQVHKMLAEFRLIPGLNNLFDKLIWRKYTASNHVVHGQNE
NCDCSPEISFKIQFLRLLQSFSDHHENKYLLLNSQELNELSAISMKANIPEVEALVNTDR
SLVCDGKKGLLTRLLAVMKREPPDSSFRFWQARAVESFLRGATSYADQMFLLKRGLLEHI
LFCIIDSGCTSRDVLQSYFDLLGELMKFNIDAFKRFNKYVNTPEKFQTFLTQINSSLVDS
NMLVRCIVLSLDRFESQTEDVKVVEVLSECCLLSYMAKVENRLSFLFRLINIINVQTLTQ
ENVSCLNTSLVILMLARRKAKLPFYLNALREKEYAEKYPGCLLNNFHNLLRFWQRHYLNK
DKDSTCLENSSCIPFSYWKETVSVLLGSDRTSLCAISSYIDEPFMDLDRDLLED
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgcttctggggtccgagtccccctgtactggaggaaaacgaagacattgccgc
agcaatatcgtcaaaaagttcacggccagtaaaatcaccggccagggtttcagccaaggg
acacagctcccagtaggtttgctccaggagagagataaacgggccaagtggaatggcatc
cctactgtgctgcagaagctctacgagagcagcaatcccaacagtgacctctcccatgcc
cacagctttcttaaggtattatcatctcagctctccgtggaggccatgtcttttgtcaca
gaggacaggaagaccgctcaggaatccaccttccccaacacgcacacctttgacctcttt
ggtggagtcgatctgctcgtggagatcttgatgagacccacactaactatgcagaagaaa
aaacccaaaatgaatgatgacctggttaaggactgccttagtgttctctacaactgttgt
atatgtacggagggggtgacaaagtgtctggcagcaagggacgactttgttctgtttctc
ttcaccctgatgacaaacaagaagaccttcctacagactgctacccttattgaagatatc
ctaggggtcaaaaaggagatgatccagttggaagggatccccaacctatcaggcctggtc
caaagctttgaccagcaacagcttgccaacttctgccgcatcttgtctgtcaccatctca
gaacctgatgtaggaaatgatgacaagcacaccctgctggctaaaaacgctcagcagaaa
cgcaacgccatcccctcacgggcagaggtcaatcaggtaaccctgctgaacatccctggg
ttcatcgagcggctgtgtaagctcgccactagaaaggtgtctgaggccacaggcgccaac
ttcctgcaggagctggaggactggtacacatggctagacaatgctctggtgctggacgcc
cttatgcagatggccactgaggaggcggaacaaagcagtacagaatcatcagatgagagt
tctctggccacaagccccctgaggcatcgactgcctcagtccatgaagactgtccatgag
atcatgtataaagtggaagtgatgtatgtactgtgtgtccttctcatgggccgacagagg
aaccaggtccacaagatgctggccgagttccgtctcatcccaggtctcaataacctgttt
gacaagctgatctggaggaaatacactgcttcaaatcatgtggtgcacggccagaatgag
aactgcgattgtagtccagaaatctcctttaaaatccagtttttgcggctactccagagt
ttcagtgatcaccatgagaataagtacctcttgctgaatagccaggagctgaatgaactg
agtgccatttccatgaaggctaacatccctgaggtggaagctctggtcaacacagacaga
agcctagtgtgtgatgggaagaagggcctcctcacgcgtctcctcgctgtcatgaagagg
gagcctccagactcgtccttcagattctggcaggcaagagcagtggaaagttttcttaga
ggagccacctcctatgcagaccaaatgttcctcctgaaaaggggactgctcgagcacatc
ctgttctgcatcatcgatagcggctgtacatctcgagatgtcctacagagctactttgat
ctgctgggcgagctcatgaagttcaacattgatgccttcaaaagattcaacaaatatgtc
aacactcctgaaaagtttcagaccttcctgacgcagatcaacagctctctagtggactcc
aacatgctagtgcgttgcattgtcctttcgttggaccgcttcgagagccagactgaagat
gtcaaagtggtggaggttctgtctgagtgctgcctgctgtcctacatggccaaagtcgag
aacagactttccttcctcttcagactgatcaacatcatcaacgtgcagactctcacacag
gagaatgtgagctgtttaaacaccagccttgtgatcttgatgttggccagaagaaaggct
aaactgcccttctacctcaacgccttgcgggagaaggagtatgcagaaaagtacccgggc
tgcctgctcaacaacttccacaacctactgcgcttctggcagcgccactacctcaacaag
gacaaagatagcacctgtctggagaatagctcctgtatccccttcagctactggaaggag
acggtgtcagtgctgctgggctcagacaggacttctctttgtgccatatcgagctacatt
gatgagcctttcatggatctggacagagacctgctggaagattga
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