KEGG   Hippoglossus stenolepis (Pacific halibut): 118104791
Entry
118104791         CDS       T08308                                 
Symbol
nfasca
Name
(RefSeq) neurofascin homolog (chicken) a isoform X1
  KO
K06757  neurofascin
Organism
hsp  Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:hsp00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    118104791 (nfasca)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:hsp04515]
    118104791 (nfasca)
Cell adhesion molecules [BR:hsp04515]
 Immunoglobulin superfamily
  L1 family
   118104791 (nfasca)
SSDB
Motif
Pfam: I-set Ig_3 ig Ig_2 fn3 Bravo_FIGEY V-set C2-set_2 Ig_DSCAM-DSCAML_C Ig_VEGFR-1-like_5th BiPBP_C DUF3792
Other DBs
NCBI-GeneID: 118104791
NCBI-ProteinID: XP_035007815
LinkDB
Position
3:30432410..30554706
AA seq 1388 aa
MLGQGRHTALALVSLLLLSLREATPIEVPQDPKIQQDLKQPPTIVKQSVKDYIVDPRDNI
IIECEAKGNPVPTFSWRRNGKFFNIGKDPRVTMRKRSGTLEIGFRSGGRPEDYEGEYQCF
ATNDFGVALSNKILLRVSKAPLWPKEVLEPVVVTEGSPLVLTCNPPPGLPPPFTFWMSSA
MNPISQDKRVSTGLNGDLYFSNVVAQDAHTDYSCNARFLFTHTIQQKNPFTLKVLTKEPY
NETSYNATDPYGGRKVSESTPTFLSPSGSESSKIVQRDEQLLLECIAAGLPTPTVKWFKK
GGDLPGNKVKFQNFNKTLKIISVSEEDAGEYVCMANSHLGSIRHSIFVQVKAAPYWLDKP
TDLVLAPDENGRLVCRANGNPKPNIQWLINGQPIDTSPANPSRQVLGDTILFRSVQMGSS
AVYQCNASNQHGYLLSNAFVSVLDMPPRMLGPKNQLIKVIENNRTFLDCPFFGSPLPELR
WFKNGQGSGLDGGQYRVYINGTLEIKRARTEDEGTYTCVANSILGSAENQVRLEVKAQTR
IVRFPEHQSAIRGSTARFNCKVKSDPSLPVTVTWTKDDKALYLGWRLRKDDESLTIPNVN
EGDEGTYTCTVKSEIDQDSASARLTVLEEASLNPSLSSALPPDRPDPPIDLDLSDPAARS
VRLTWIPGNDHRSVITEFLVQFEEDRWEPGRWQNLSTYPGDLNSVILQLAPFVNYQFRVI
AINSVGQSQPSRPSPRYKTSGAAPDVIPRGLRGWGSKKDNMEITWEPLLDLERNGPNLQY
NVWWRRKDVGEEWSNVTTEGSKHIIHNTETYVPYEIKVQARNEFGQGPESNVVIGYSGED
KPTDAPTDFRVSKVDSTKANIHWKSVDPNSVQGEFKEYKLYYWRESSIVPGLMVSKENKT
KGIYSTTSEPSGILSDLVPYSKYKMFIVVANRHFEGPPSNTVEFSTKEGVPDAPRFFRIN
RRSFDTIYLEWDKPLEPNGILTGYQLKYQTVNGSRVGRQQLETFLPNMTDFTLRLPDRST
RFKFLLSALTQVGAGEVFAEESPHFTNEDNFTDTTGLVNLTDTSVASTFTPTPPPLASLP
PTTMAPTTIAPTTISTSTTTTPKATTSPSTTTTPTTATTATEATTTTTPPVLVTTRRTDQ
NVLVVPGQKIWDLTVEPNSNYANVSWRHNFPAGSSEFVLEFTLDSNNTERTVRVTQQPPI
RVADLIAGAAYRLRVYSHEFNSISSNYFNFKTQAAYIDQVDIATQGWFIGLMCAIALIIL
ILLIVCFIKRSRGGKYPGGCCVTGFAKYLVRDKKDLPLDSVDHKDQDGSFDYHSDEDNKP
LQGSQTSLDGNVKESDDSLVDYGEGGDGQFNEDGSFIGQYTVKKDKDETEGNESSEATSP
VNAIYSLA
NT seq 4167 nt   +upstreamnt  +downstreamnt
atgttggggcagggcaggcacacggccctggctctcgtgtctttactgcttctatcattg
cgtgaggcaacacccatcgaagtcccacaagacccaaagatccagcaagacctgaagcaa
ccccccactatagtcaaacagtcagtgaaggactacattgtcgacccaagagataacatc
atcatcgagtgtgaggccaagggcaacccagtgccaacgttttcatggcgaaggaatggg
aagttcttcaacattgggaaagatcccagggtgactatgcgaaaacgctcaggaacactg
gagattggtttccgtagcgggggacgaccagaggactacgaaggagagtaccaatgtttt
gctaccaatgactttggagtagctctgtccaacaaaatcctgctgcgggtctcaaaggct
cctctgtggcccaaggaggtgttggagccagtggtggtgactgaaggctccccactggtt
ctaacctgtaaccccccaccaggactacctcctccctttaccttctggatgagcagcgct
atgaacccaatatcacaagataagagagtgtctacaggtttgaatggagacctgtacttc
tccaatgttgttgctcaagatgctcacacagactacagctgcaatgctcgcttcctcttc
acacacaccatccagcagaagaaccccttcacactcaaagttctcaccaaggagccatat
aatgaaacatcttacaatgccactgacccctatggtggccgtaaagtatccgagtccacg
ccgaccttcctctcaccatcaggcagtgagagctccaaaattgtgcaacgagatgagcaa
ctgctactggagtgtatcgctgctggactaccaactcctaccgtcaagtggttcaagaag
ggcggggacctgccaggaaacaaagtgaagtttcagaatttcaacaagaccctgaagatt
atcagtgtgtcagaggaggatgctggggagtatgtgtgtatggccaacagtcatttaggc
agcatacgccacagcatctttgtccaggttaaagcggctccttactggctggacaaacct
acggacctggtgctagccccggatgagaacggccgcctggtgtgtcgggccaacgggaac
cctaaacctaacattcagtggctgatcaatggacaacctatagacacctctcctgctaac
ccgagcagacaggtgcttggtgacaccatcctcttccgctcagtgcaaatgggaagcagt
gctgtttatcagtgcaacgcctccaaccagcatgggtacctgttgtccaatgccttcgtc
agtgttctcgacatgcctccgaggatgctgggccctaaaaaccaattgattaaagtcatt
gagaacaaccgcacctttttggattgtccattctttggttcccctctgcctgaactacgc
tggtttaagaatggacagggcagtgggctggatggtggtcagtaccgtgtttacatcaac
ggcaccctggagatcaaaagggctcgaacagaggacgagggcacgtacacatgtgttgcc
aacagcatcctgggctcagccgagaaccaggtccgcctggaggtcaaagcgcaaactcgt
atagtcagattccctgagcaccagtcagccatcaggggctccacagctcgtttcaactgt
aaagtgaagtcggatcccagcctgcctgtcactgtgacctggaccaaggatgacaaggct
ctctatctaggatggaggctgaggaaggatgatgagtcactgaccatccccaatgtgaat
gagggtgatgagggaacatacacctgcactgttaaatctgagattgaccaggactccgca
tctgcccgcctgactgtgttagaggaagcctccctcaacccctcactctctagtgccttg
cctccagaccgcccagaccctcccatagatctagatctgtctgacccagcagcccgcagt
gttcgcctcacctggatccctggaaatgatcacaggagtgtcatcacagaattcttggtc
cagtttgaggaggaccgctgggagccaggcaggtggcagaacctgtccacttaccctggg
gacctcaactctgtcatcctgcagctcgccccatttgtcaactaccagttcagggtcatc
gccattaattcagttggccagagtcagcccagccgtccctcaccaagatacaagaccagt
ggagcggctccagatgtaattcccagaggtcttagaggatggggctccaagaaggacaac
atggagatcacttgggagccactgcttgatctggagagaaatggtccaaatctacaatac
aacgtgtggtggagacggaaggatgtgggggaagagtggagtaatgtgaccacagagggg
tccaaacatatcatccacaacacagaaacctatgtgccttatgagatcaaagtccaggcc
agaaatgagtttgggcaaggacctgagtctaatgtggtcattggatactctggagaggac
aagcccacagatgctcccactgactttagggtatcaaaggtcgacagcaccaaagcaaac
atccactggaagtctgtggacccaaactctgtccagggagagttcaaagagtacaagctg
tattactggcgtgagtccagtatagtcccaggtttgatggtcagtaaggagaataagacc
aaagggatctacagcaccacgtccgagccatctggcatcctcagtgacctggtgccctac
tctaaatataagatgtttatagttgtggccaacagacactttgaaggccctcccagcaac
actgtggagttctccaccaaggagggagtccccgatgctccaagattcttcaggatcaac
aggaggagttttgacactatctacttggaatgggataaacctttggagccaaacggcatt
ctaactggataccaactcaaatatcaaacagtcaatggctccagggtgggtcgacaacag
ctggagacttttcttccaaatatgacagacttcacccttcgcctgccagatcgatctacc
cgctttaagttcttactgtcagcgctcacacaggtgggagcaggagaggtcttcgctgag
gagtccccacacttcaccaatgaggataattttactgatactacaggtctagtcaacctt
acagacacctctgtggcttcaactttcactcccactcctcctcctctcgcttctcttcct
cctactaccatggctcctacaaccatcgctcctacaaccattagcacctcaactactacc
actcctaaagctacaacttctccttctactacaacaactcctactaccgccaccactgca
actgaggcaacaactaccaccacacctcctgtgctagtcaccaccaggcgtaccgatcag
aatgtgttggtggtccctgggcaaaagatctgggatctgacggtggagcctaacagtaac
tacgctaacgtcagctggagacacaacttcccggccggcagcagcgagtttgtgctagag
ttcacactggacagcaacaacacggagagaacagtacgagtgactcaacagccccccatt
agagtggcggatctgatcgcaggtgccgcgtaccgtctgagggtttactcccatgaattc
aacagcatcagcagcaattatttcaactttaagacccaagcagcttacatagaccaggta
gacatcgccactcagggctggttcatcggcttgatgtgtgccattgccctcatcatactg
atcctcctcatcgtctgcttcatcaaaaggagtcgtggtggcaaatatccaggtggctgc
tgtgtgactggtttcgcaaaatatctcgtgcgtgacaaaaaagatctccccttagactca
gtggaccataaagaccaggatggatccttcgattaccacagcgatgaggacaacaagcct
ctgcagggcagccagacttcgctggatggcaatgtgaaggaaagcgacgacagcctcgtg
gactatggtgaaggtggcgatggtcagttcaacgaggatggctcttttattggccagtac
acagtgaagaaggacaaggatgagacagagggcaacgagagctccgaggccacttcacct
gtcaatgccatctactcactggcatag

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