Hippoglossus stenolepis (Pacific halibut): 118104852
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Entry
118104852 CDS
T08308
Name
(RefSeq) histone-binding protein RBBP7 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03082
ATP-dependent chromatin remodeling
hsp03083
Polycomb repressive complex
hsp04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118104852
03083 Polycomb repressive complex
118104852
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
118104852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsp03036
]
118104852
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
118104852
Histone modification proteins
HAT complexes
HATB complex
118104852
HDAC complexes
Sin3A-HDAC complex
118104852
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
118104852
PRC2.2
118104852
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
118104852
Heterochromatin formation proteins
Other heterochromatin formation proteins
118104852
Chromatin remodeling factors
NuRD complex
118104852
NuRF complex
118104852
NuRF complex (fruit fly)
118104852
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
CAF1C_H4-bd
WD40_CDC20-Fz
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_Gbeta
WD40_WDHD1_1st
Beta-prop_Aladin
DSE1_N
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
EIF3I
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_NOL10_N
Beta-prop_DCAF12
Beta-prop_WDR19_1st
WD40_RFWD3
ANAPC4_WD40
Beta-prop_RIG_1st
eIF2A
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
ASA1
CFAP251_N
Beta-prop_WDR41
Beta-prop_SPT8
MIOS_WD40
PAC11
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
118104852
NCBI-ProteinID:
XP_035008001
LinkDB
All DBs
Position
1:31325357..31339470
Genome browser
AA seq
427 aa
AA seq
DB search
MADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVRRPEGKDY
AVHRLVLGTHTSDEQNHLVIASVQVPNDDAQLDASHYDSEKGAEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPFIIATKTPTCDVLVFDYTKHPPKPDPSGECIPDMRLKGHQKEG
YGLSWNPNLSGNLLSASDDHTICLWDIGAGPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKASHAVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDNTPAS
ELEAQGS
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaagaggtttatgatgatgcagtggaagaaagggtcatcaatgaagagtac
aagatctggaagaaaaacacgcctttcttgtacgacctggtgatgactcatgcacttgag
tggcccagcctcactgtccagtggctcccagatgtccgcaggccagaggggaaggactac
gctgtccacaggctggttttagggacccatacatcagatgagcagaaccaccttgtgatt
gccagtgtccaagtgccaaatgatgatgcccagcttgatgcttcacactatgacagcgag
aaaggagcagagtttggtggatttggttcagtaagtggaaaaatagagatcgagatcaaa
atcaaccacgagggagaggtgaaccgagcccgctacatgccccagaaccccttcatcatt
gccaccaagactcccacgtgtgatgttttggtctttgactacacgaagcacccgcctaag
ccagatcccagtggggaatgtattcctgacatgagactgaaaggtcaccagaaagaaggg
tatggtctttcttggaatcccaacctcagcggcaaccttctcagtgcctctgatgaccat
accatctgtctatgggacatcggtgctggcccaaaggaagggaaggttgttgatgccaaa
accatcttcacaggccacacagcagtggtggaagatgtttcctggcatttgctccatgaa
tccctgtttggctcagtggccgacgaccagaagcttatgatatgggacacacggtccaat
aacacatccaaagccagccacgcggtggatgctcacactgctgaagtcaactgtctgagc
ttcaacccatacagcgagttcattcttgccactggttctgctgataagactgttgcactg
tgggatctcaggaacctcaaactgaagctacactcgtttgagtcccacaaagatgaaatc
ttccaggtacaatggtctcctcacaatgagaccatcttggcctccagtggcaccgaccgg
cgtctcaacgtctgggatctcagtaaaattggggaggagcagtcggcagaagatgcagag
gatggcccaccagagctgctgttcatccacggaggccacaccgccaagatctccgacttc
tcctggaaccccaacgaaccctgggttatttgctctgtgtccgaggacaacatcatgcaa
gtctggcagatggcagagaacatctacaatgatgaggaaccagacaacacccctgcatca
gagctggaggctcagggatcttaa
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