Hippoglossus stenolepis (Pacific halibut): 118104898
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Entry
118104898 CDS
T08308
Symbol
prdm2b
Name
(RefSeq) PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp00310
Lysine degradation
hsp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
118104898 (prdm2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118104898 (prdm2b)
03036 Chromosome and associated proteins [BR:
hsp03036
]
118104898 (prdm2b)
Enzymes [BR:
hsp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
118104898 (prdm2b)
Transcription factors [BR:
hsp03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
118104898 (prdm2b)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
118104898 (prdm2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
zf-C2H2_jaz
zf-C2HE
zf-H2C2_2
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
118104898
NCBI-ProteinID:
XP_035008074
LinkDB
All DBs
Position
3:12469808..12486160
Genome browser
AA seq
1715 aa
AA seq
DB search
MAIIGGTVETLDEIPAHVWKGLPDCLSLRPSAINQSRIGVWATRVIPKGKRFGPFVGEKK
KRSQVTSNVYMWEVYFPARGWMCVDATNPMKGNWLRYVNWACSSDEQNLFPLEINRAIYY
KVLRPIRPGEELLVWFTVEDNPEITAALEEERASSLSRKNSARAKRARRKLLEGARQAGL
GGFKKTSRTKPTVKEMWDGEESQKEEDERPLALGTSQETHPMASTDCKDVQDMSAGLMDR
GNGEEEEDEEEEDADDLMVQQQTDQHLAAADSMQNKQSVMSRTSGKESHNISELKLESSS
IRGQEPEVDPDLDLDPDPDGDLEIDLHGESYPCQHCERHFSTRQGLERHIHIHAITNQQT
QLFKCRYCSKSFGSQVGRRRHERRHESGPKKRPGSLAGTATLLSPVVQTDGSSPDCTSRT
SQYIAIGSQLTGGPLHTSDLQRKEFGPHGDRPFMLDDSGESKELHPCKYCSKAFGTHTNM
RRHQRRIHERHLLPKGVRRKGMLLQEASVQQQPQPDESPSTSPPPVYVPSADTEDEVDRD
DYAIDISKNISENLSFYIDGKIVSSSSVSTCEVIEVDSRSAALFGLDTVIISPNQIGQAL
KMEGRMGAAKQVSNVGQSAAKRRTSTPPFIPSLKVETESTPFTACSSSSSSSTSSSSNLL
MGGLFQQATDSSAFLREKTVYLSPKLKQLLQTQDVQKSTIALITESHRLASPLSVTPLPG
ASGRFKRRTASPPSSPQLSPVCKTESCKSEVASSYTLKVPKLESHSVSLPGSLLDKDDGD
TLSPSGNNTHNQTSAGSGGNSCNQQPLDLSNSVSRKSESLNKVMGDSALDLSLNRKSSAE
PEAKGSPAPQPLTKKRKPNTSMLEKVLMNEYVGLSLPGEEGPSALANLSCFHSRSPNVES
ESANPSPPSLTPVTLNPSSPSSSSMTSPTPPPPVLPTIPSPPPMPSSPLSQPTDSSALRP
LPVLSPKMSPRSVEHMSLSDSENILSAEEDEYEEEDNVSEPLDSLKTPLKDPLNRSKPSP
LESTSVDLHATEDVSVTSNTLLNGNLKQEHDSVTEKTFKSDFAPVSPQPESSSPSPSPSP
TSHDQSPLLVPQSLLQIKIKEEPQHCTDELSVTKQSPQDDVDTSSKPAAPDKPPDKTSEP
MEFDSAYCKTFVCNVCEEPFNSIKELSGHITVHAADWPFKCEFCVQLFGDGPALLAHRTA
LHGVGRIFVCSVCSKEFAFLSNLQQHQKDLHPNETCSNTTLESGKLRPQNYTDPSRAKEE
SSPSTPAPQMINEPVPQSESDLVKDEPDVNGNHADDGAEDPNEELYTTIKIMASEGGKPK
GPDVRLGLNQHYPSYKPPPFPYHSRSHAGSVASATNFTTHNIPQTFSTAIRCTKCGNSFD
NMPELHKHILACANASDKKRYTPKKNPIPLKQIVKSPNGVVSPTAAAAAQSAFRRMGQPK
RLNFNQDTGKTKMSALSKKRNQLVQKAISQKNKAATIAKKANVKTEEEQPSNVCHHCSRE
FTYPASLHKHMAVSCPMKPVVKKGKKGLAEVKREAGSVVDKSMSLRKKALDCEMQTEPQR
KLLGKTRARSSGAANPEPSQTSKGKSAAAPGRLKRPASFPTPVSASKKVKKGQVQSLPPT
PIPAPDTPSDTAQQRPAMRMQRMGKEAAPKKLAEAKSLPPSQQQLKKEERFSLRTRERVG
GPVTRSLQSTAPPAEVKTEEPPVQEPKETQEVLTK
NT seq
5148 nt
NT seq
+upstream
nt +downstream
nt
atggctataattggagggacggtggaaacgctggatgaaattccagctcacgtgtggaaa
ggtttgcccgactgtttgagtctcagaccttctgctataaatcaaagccgcatcggtgtc
tgggccactcgtgtcattcctaaaggcaagaggtttggtccatttgtcggtgagaagaag
aaaaggtcccaggtgaccagtaatgtttacatgtgggaggtttatttcccagcgcggggc
tggatgtgtgttgacgccacaaaccccatgaaggggaactggctgcgatacgtgaactgg
gcgtgctccagtgacgagcagaatctctttcctcttgaaatcaacagagcaatttactac
aaggttttaaggcctatccggcctggagaggagctgctggtgtggttcactgtggaagac
aaccccgagataacagctgcactggaggaagaaagagccagcagcctgagcaggaaaaac
tcagcccgggcgaagcgagcaagaaggaagctgttggagggagccagacaggctggtttg
ggtggattcaagaaaacaagtagaaccaaacctactgtcaaggagatgtgggatggggag
gaaagtcagaaggaggaggatgagaggccattggccttgggaacctcgcaggaaacccat
cccatggcgagcactgactgtaaagatgtgcaggatatgtcagcaggattaatggacagg
ggaaatggggaggaggaagaagatgaggaggaagaggatgctgatgatttgatggtacaa
cagcaaacggatcaacatttagctgcagctgattcaatgcaaaataagcagtctgtcatg
tcacggacttctggcaaagaaagccacaatatttcagagctaaagttagagtcttcctca
attagagggcaagaaccagaggtcgaccctgatcttgaccttgaccccgaccccgatggt
gatcttgaaatagatctacatggagagtcatatccctgtcagcactgtgaacgtcacttc
tccaccagacagggtctggagcgtcacatacacattcatgctatcacgaaccagcagaca
caactgtttaagtgcagatattgcagtaaatcctttggctcacaggtgggtcggcgccgg
catgagagaaggcacgagagtggacccaagaaaaggcctggctctctggctggaactgcc
actctcctcagtcctgtggtgcagactgatggctcaagtccagactgcaccagccgaact
agtcagtacatagccatagggtctcagttaactggagggcctctgcacacctctgacttg
cagagaaaagagtttgggccccatggtgaccgtccctttatgctggatgacagcggagag
tcaaaggagctccatccctgcaagtattgcagtaaagcatttggcacacacaccaacatg
cggcgacaccaacgcagaatacacgaacggcacttgttaccaaagggtgttcgcaggaaa
ggaatgctgctgcaggaagcatcagtgcagcaacagccgcagccagacgagtcccccagc
accagccctccacctgtctatgtgcccagtgcagacacagaagacgaggtagacagggat
gattacgcaattgatatatccaaaaacatctctgagaatttgagcttctacattgacggc
aagattgtgtccagcagttcagtgagcacctgtgaggttatagaagtggactccaggtct
gcagctctgtttggtctggacacagttataatcagccccaatcagatcggacaggcgcta
aagatggaggggagaatgggggctgcaaagcaagtctccaatgtcggccagtcagcagcg
aagaggagaacatctacacctccatttattcccagcctcaaagtggagacagaatcaaca
cctttcacagcctgttcatcatcctcatcatcctctacatcttcctcttctaacttgcta
atgggaggactgttccaacaagccacagattcatcagcatttctgagagagaaaacagtt
tatctgtcaccaaagctcaaacagctccttcagacgcaagatgttcagaaatcaaccatt
gcccttataacagaaagccatcgattggcctccccgctgtcagtcacgcccctgccaggg
gcttcaggcaggtttaaaaggagaacagcgtctcccccttcgtctccacagctcagtcct
gtgtgtaaaacagagagctgtaaatccgaggtggcaagctcatacaccctcaaggtgcca
aagctggaaagccacagtgtgtcacttcctgggagcctactggacaaagatgatggggac
accctgagcccctccggaaacaatacgcacaaccaaacgtctgctggtagcggaggaaac
tcctgtaatcaacagcccttggatctgtccaactctgtcagtcggaaaagtgagagcttg
aacaaggtgatgggagattcagctcttgatttgagcttgaatcgtaagagctcagctgag
cctgaagcaaagggaagcccagcgccacagcctttaacaaaaaagagaaagcctaacacc
agcatgcttgaaaaggtgctgatgaatgagtatgtgggtctgagtttgccaggagaggag
ggcccctcggccttagcaaacctaagttgtttccattctcggtctccaaatgttgaatca
gagtctgccaacccatctccgccctctttgacccctgtcacattgaacccatcctcccca
agttcttctagcatgacatccccaacaccgcctccccctgtactacctaccataccgtct
ccaccacctatgcctagttctcctctctctcagcctacagactcatctgctctgagacct
cttcctgtcctctcgccaaaaatgtctccgagatcagtcgaacacatgtccctgtcagat
tcagagaatattttgtcagctgaagaagacgaatatgaggaagaggacaatgtctctgag
cccctggactccctgaaaactccacttaaagatccccttaaccgttcaaaaccaagtcct
cttgaatctacgtcagtagatcttcacgctacagaagatgtttctgtgactagcaacact
ctgctaaatggcaatttgaagcaagagcatgactcggtaacagagaaaactttcaaatct
gactttgctcctgtctcacctcaaccagaatcctcatctccttcgccatctccttctcct
acatcacatgatcaatccccattgcttgttccacaatccctccttcagataaagataaaa
gaagaacctcaacactgcactgacgagttgtcagttacgaaacagtctcctcaggatgat
gttgacacttcatccaagcctgctgctcctgataaacctcctgataaaacgtctgagccg
atggaattcgactcagcatactgcaagacctttgtgtgtaatgtctgcgaggagcctttc
aactccatcaaagagctcagtggacatatcacagttcacgctgccgactggcccttcaag
tgtgaattctgcgtgcagctgtttggtgacgggcccgccctgctggctcaccggacagca
ctgcatggagtgggcaggatctttgtgtgctctgtctgttccaaagagtttgcctttctc
agtaacctccagcagcaccagaaggatctgcatccgaatgagacatgttcgaatacgacc
ttggagagcggcaaactcaggccacagaactacacggatccatccagagccaaagaggaa
agcagtccctcaacaccagcaccgcagatgattaatgaacctgttccacagagtgagtca
gatttagttaaagatgaacctgatgttaatggtaatcatgcagacgatggagcggaggac
cccaatgaggagctatacactacaataaagatcatggcttctgagggagggaaaccaaaa
ggcccagacgttcgccttggccttaatcaacactaccccagttataaaccaccccctttt
ccttatcacagccgttcccatgctggctctgtggcttcggctaccaacttcaccacccac
aacatcccacagactttcagcactgccattcgctgcaccaagtgtggcaacagcttcgac
aacatgcccgaactgcacaagcacatactagcttgtgccaatgctagtgataagaagcgt
tacactcccaagaaaaaccccatccccctcaagcaaatagtgaagagcccgaatggagtt
gtgtcgcctacagcagccgctgcagcccagagtgctttccgtagaatgggtcagccaaag
agacttaactttaatcaagatactggtaaaacaaagatgagtgccctcagtaagaagagg
aaccagcttgtccagaaggcaatttctcagaaaaacaaagctgccaccattgcaaagaag
gctaatgttaaaactgaagaagagcagccctctaacgtttgccaccactgcagccgggag
tttacttatcctgcaagtctccataaacatatggcggtcagctgtcccatgaagcctgtt
gtgaaaaagggcaaaaaaggtctagcagaggtgaaaagagaggcagggtctgtggtagac
aaaagcatgagtcttaggaaaaaggccttagactgtgaaatgcagacagagccacagcgt
aaactgctgggaaagaccagagctcgtagctctggtgcagcgaaccctgaaccctcccag
acaagcaaaggaaaaagtgcagctgctccgggcagactaaagaggcctgcatctttccca
acccctgtttctgcgagtaaaaaagttaagaagggccaagtccagtctctacctcccacc
cccatcccagcccctgacactcccagtgacactgcacaacagcggccggccatgagaatg
cagcgtatgggtaaagaggcagcacccaagaaattagcagaggccaaatctctaccacca
tcacaacaacagctgaagaaagaggagcggttctctttgcgaacacgggagagagttggc
ggtccagtcaccaggagcttacagagcacagctcctcctgctgaggttaagaccgaggaa
ccaccggttcaagagccaaaagagactcaggaggttctgactaagtga
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integrated database retrieval system
