Hippoglossus stenolepis (Pacific halibut): 118104919
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Entry
118104919 CDS
T08308
Symbol
tmf1
Name
(RefSeq) TATA element modulatory factor
KO
K20286
TATA element modulatory factor
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118104919 (tmf1)
Membrane trafficking [BR:
hsp04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
118104919 (tmf1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
KAAG1
Motif
Other DBs
NCBI-GeneID:
118104919
NCBI-ProteinID:
XP_035008107
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All DBs
Position
3:complement(22768413..22780147)
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AA seq
1158 aa
AA seq
DB search
MSWFNASHLSSFAKQALTTAQKSIDRVLDIKEEDQWGDMTVMPYDDVSLPGKLSLSGGWG
MTQWETSPEEKTTTPPPSSEAITTPVTRTVVDESENFFSAFLLAVDEQDATQTQVVSVAP
AKSQRRPRVKGKKKKEAGIQKDFESQKSTSTDESDEDQTVAESQSFESESSPEAPHADTI
LLQPVSPVSSSSDLPCNPDCKTSGVKTNIGSTVSLDPKTEQPQLPSEHQVEQDTIDSSEP
SAVTSELKSSTPTDSSPPPSAKEVLMEHKDSKVEDRQNDTPSPPVSAFSSGTSTTSDIEV
LDHESVLSESSASSRQETGEGKAALHLMQGSFQLLTASTCGDFPRLEDYPKLTESCGSSS
DAFERIDSFSMQSLDSRSVSEVNSDDDIPSSRTLASVTAGPASLTVESAVCQKQEDGMVD
KVGDEEDEEGFTETAREQSLDEMEESGRSATPVNCEHPEELVEQDRGSEATVTLSELFSN
AEKLIIPPITEEMRSVSTVQILEFQKVIDELSGRLEKRESQLLAVSKDKARLEEDCDNLK
DEVISLKEESSTVQSLKDEFTQRIADAERKAQLACKERDIAKKEIKGLREELSTRLNSSD
TMEIIREKEEQIRGLLEEGEKLSKQQLQHSNIIKKLRVKEKESDTKTIKHQRKIREQEEE
LRQLQQVLEGKEELEKQHRENIKKLNSVVERQERELSRLQSDSDELQEKTRSVQAALDNS
YKELAELHKTNASRASKAEVAALSRDTQAKEQLSLVLEKAQDEARMQQEALANQVADLRM
ALQRAEQQQARKEDYLREEISELQQRLQEAETRNQELSQSVTSATRPLLRQIENLQASLG
GQTASWEKLENNISDRLANAQAQLAVAVEKERSATEELLSIKSQLASLDSQNSLLRQEKA
RFLAQLDAEKNKREKLEDDSSREHVELENLRGEHSRMLEETKKEKLLLANQLEMEKMKVE
QEKKKCYLAQESLKEKERKALTHSVGEPPASSTPSLSRSSSISAADNAGLHTSLLSQDDP
SDYSLSTMAMSVSMSGTNLYEAARLSGGSSIMENLQSQLKLREGEIAQLQLEISSLERSR
SVMSEELVRLTNLNDEMDEKVMEIPKLKVQLKELEQRHNTILQMYGEKAEEAEELRLDLE
DVKNMYKIQIDELLKNQK
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgagctggttcaacgcttctcacctgtccagcttcgccaaacaggcgttaacaacagct
cagaagtccatcgaccgtgttctggacattaaagaagaggaccaatggggtgacatgact
gtgatgccctatgatgatgtttccttgcctggaaagctgtcgttaagtggaggatggggg
atgacgcagtgggaaacatcccctgaagagaagaccaccactccgcctccctcctctgag
gccatcaccacgcctgtcacccgcacagttgtggatgaatcagaaaactttttcagtgcc
tttctgttagctgtagatgaacaagatgccacccaaacccaggtcgtgtctgtcgctcct
gctaagtcccaaaggcgccctcgggtgaagggaaagaaaaagaaagaggctgggatccag
aaagacttcgagagtcagaagtcaacatccactgatgagagtgatgaggatcaaacagtt
gctgaaagccagtcatttgagtcagagtcttcaccagaagcccctcatgcagacaccatc
ctcctgcagccagtttctcctgtttcttcttccagtgatcttccttgtaaccctgactgc
aaaacgagtggtgtaaaaacaaatattggttcaacagtttctctcgatccaaaaacagag
cagccacagctgccatcagaacaccaggttgagcaggataccattgattcctctgaacct
tctgctgtcacttccgaactaaagagctctacacccactgattcttcgccccctccatcc
gctaaggaggtactcatggagcataaagactcaaaggttgaggaccgtcaaaacgatacc
ccgtcccctcctgtaagtgctttttcctcaggaacctctaccaccagtgacattgaagtg
ctcgatcacgagagtgtgttgagtgagagctcagccagctccagacaagaaacgggtgag
ggtaaggctgcccttcacttaatgcagggctctttccagcttctcactgcctccacttgt
ggagatttcccccgactggaggactaccccaaactcacagagagctgcggttcctcctca
gacgcattcgaacgcatcgattcattcagtatgcagtcactggatagccggagtgtcagc
gaggtcaactcagacgatgacatccccagcagtcggacactagcgtctgtcactgcaggc
cctgcttctttaacagtggaatcagctgtttgtcagaagcaggaagatggaatggtggac
aaggtaggagatgaggaagacgaggagggattcactgaaacggcgagggagcagtcgctg
gatgagatggaggagagtggacggagtgcaacgcctgtgaattgtgagcatcctgaagag
ttagtggagcaggatcgaggatcagaggcaaccgtcacactgtcggagctcttctccaac
gctgaaaaactgatcattccaccaatcacagaggagatgagaagtgtctcaacagttcag
atattggagtttcaaaaggtcattgatgagctgtcaggccgccttgagaagagagagtct
cagctgctggcagtcagcaaagacaaggccaggctggaggaggactgtgacaatctcaaa
gatgaagtgataagcctcaaggaggaaagctccactgtgcagtctctaaaggatgagttc
acccagcgcatcgcagatgctgagaggaaggctcagctggcctgcaaagagagagatata
gccaagaaggagataaagggcttgcgagaagagctttctacgaggctgaactccagcgac
acaatggagattatcagggagaaggaggagcagatcagaggtctgctggaagagggtgag
aagttatccaagcagcagctgcagcacagtaacatcatcaagaagctgcgtgtcaaggag
aaggagagcgacacaaagaccatcaagcaccagaggaaaatcagggagcaggaggaagag
ctcaggcagctccagcaggttctagaagggaaggaggagctggagaaacagcacagggaa
aacatcaagaagctgaattctgtggtggagcggcaggagagggagctgagcaggctgcag
tcagactctgatgagctgcaggaaaaaacccgaagcgtacaggctgctctggacaactct
tataaggagcttgcagaactccacaagacgaatgccagcagagccagcaaggctgaagta
gcagccctgagcagggacacgcaggcgaaggagcagctgagtctggttcttgagaaagcc
caggatgaggccaggatgcaacaggaggccctggccaaccaggtggctgacctgaggatg
gctttgcaaagggccgagcagcagcaggcaaggaaagaagattatttgagggaggagatc
agtgagcttcaacagaggctccaggaggcagagactaggaaccaggagctcagtcagagt
gttacctcggcaacacggccccttctacgacagattgagaacctacaggcctcattgggc
ggacaaacagcatcttgggaaaaactggagaataacatttctgatagactagccaatgct
caggcacagctggctgttgccgtggagaaggagcgttccgcaacggaggaactgttgtcc
atcaagtcccagctggcctctctggattcccagaattctttgctgcgccaggagaaagcc
cgcttcctggcacaacttgatgctgagaagaacaagagagagaaactggaggatgacagc
agcagggagcatgttgaattggaaaatctgcgaggagaacacagtcggatgctggaagag
accaagaaggaaaagctgctgctggccaatcagctagaaatggagaagatgaaggtggag
caagagaagaagaaatgctacttggctcaagagtcactcaaggaaaaggagcggaaggct
ttgacccactctgtcggagagccccctgcatcctccacaccctccctgtcccgctccagc
tccatcagtgcggcggacaatgctggtctgcacacgtctcttctttcccaggatgaccct
tcagactactcattaagcaccatggccatgtctgtgtccatgagcggaaccaacctgtat
gaggccgccaggctgtcgggaggctccagcatcatggagaacctccagtctcagctcaaa
ctgagagaaggagagatcgctcagctacagcttgaaatctctagtctggagaggagtcgc
tccgtgatgtcagaagagctggttcgactcaccaatctcaacgacgagatggatgagaag
gtgatggagatccccaagttgaaggttcagctcaaggaactggagcagaggcacaacact
atcctgcagatgtacggagaaaaggctgaagaggccgaggagctgagactggaccttgaa
gatgtgaagaacatgtacaagatccagattgatgaactgctgaagaaccagaaataa
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integrated database retrieval system
