Hippoglossus stenolepis (Pacific halibut): 118104938
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Entry
118104938 CDS
T08308
Symbol
vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118104938 (vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118104938 (vps35)
Membrane trafficking [BR:
hsp04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
118104938 (vps35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
Motif
Other DBs
NCBI-GeneID:
118104938
NCBI-ProteinID:
XP_035008142
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All DBs
Position
1:complement(29313816..29331455)
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AA seq
798 aa
AA seq
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MPTTQQSPQDEQEKLLDEAVQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVR
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDDGEQPEGSEEMTGDIND
SIDFVLLNFAEMNKLWVRMQHQGHSRDREKREKERQELRILVGTNLVRLSQLEGVNVDKY
KQIVLAGVLEQVVNCRDPLAQEYLMECIIQVFPDEFHLQTLNPFLRSCAELHQHVNVKNI
IIALIDRLALFAHREDGPGIPAEIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLA
MKCYPDRVDYVDKVLESTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLQL
KHFPPLFEYFDYESRKSMSCYVLSNTLEYNTTIVAQEQVDSILTLASTLIQDQPDQPADD
PDPEDFAEEQSLVGRFIHLLHSEDPDQQYLILNTARKHFGAGGNQRIRYTLPPLVFAAYQ
LAFRYKETSSLDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFEN
HETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMRCFSEENHEPLRTQCALAAS
KLLKKPDQCRAVSICAHLFWSGRSTEKNGEEIRDGKRVMECLKKALKIANQCMDPSLQVQ
LFIEILNRYVCFYERENDAVTVQVLNQLIQKIREDLPNLEASEETEQINKHFHNTLEHLR
LQRESPESEGPAYEGLVL
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccacgcagcagtctccccaggatgagcaggagaagcttctggatgaagctgtg
caggctgtcaaggtccagtctttccagatgaagcgatgtctggacaagaacaagctgatg
gatgctctgaagcatgcctctaacatgctgggtgagctgaggacctccatgctctctcca
aagagctactatgagctctatatggccatctctgacgaactccactacctggaggtttat
ttgactgatgagtttgcgaagggacgcaaggtagccgatctgtatgagctggtccagtat
gcagggaacatcatccccagactgtatctgttaatcacagtgggtgtggtgtacgttcgc
tccttcccccagtctcgtaaggacatcttgaaggacctggttgagatgtgtcgtggtgtc
cagcacccactcagaggtctcttcctcagaaactacctgttgcagtgcacccgcaatatc
ttgccggatgatggagagcagccagagggatcagaggagatgaccggtgatatcaatgac
tccattgactttgtcctgctgaactttgcggaaatgaacaagttgtgggtccgaatgcag
catcagggtcacagccgagacagagaaaagagagaaaaggaacgacaagaacttaggatt
ctggttggcaccaacctagttcgccttagccagctggagggtgtcaatgtggacaagtac
aaacagattgttcttgctggagtgctggagcaggttgtgaactgcagagacccgttggct
caggagtatctaatggagtgcatcattcaggtttttcccgatgagttccaccttcagacc
ctgaaccctttcctgcgctcctgtgctgagcttcatcaacacgtcaatgtcaagaacatc
atcatcgccctcattgacagactcgctctgtttgctcatcgagaagacggccccggcatt
ccagctgagatcaaactgtttgacatcttctctcaacaagtggccactgtcattcagtct
cgccaggacatgccatcagaggacgtggtctctctccaagtgtccctcatcaatttggcc
atgaaatgttaccctgaccgtgttgactatgtagataaggtcctggagagcactgtggag
atattcaacaagctcaacttggaacacatagcgaccagcagtgcagtgtcaaaggagctc
accagactgttgaagatcccagtggacacctacaacaacatcctgaccgtgttgcagctc
aagcactttccacctctcttcgagtactttgactacgagtcacgcaagagcatgagttgc
tacgtgctgagcaacacgctggaatacaacaccaccattgtggcccaggaacaggtggat
tccattttgactttggcatccacgctgatccaggaccagccagaccagccagctgatgat
cctgaccctgaggactttgctgaggagcaaagccttgtgggtcgtttcatccaccttctc
cactctgaagatccagatcaacagtaccttattctgaacacagcccgaaaacactttggc
gccggtggaaaccaaaggattcgctacacactccctcctctggtgttcgctgcctaccag
ctggccttcagatacaaggaaacctcctcactggatgacaagtgggaaaagaagtgtcag
aagatcttttccttcgcccaccagaccatcagtgcacttatcaaggctgagcttgctgag
ctgcctcttcgactcttcttgcagggggcgctggctgcaggcgagatcggctttgagaac
catgagactgtagcatatgagttcatgtcccaggccttctccctgtatgaggatgagata
agtgactccaaagcccagttggcagccatcacactaatcatcggtacctttgagcgaatg
cgttgtttcagtgaggaaaaccacgagccactgaggactcagtgtgcgctagctgcctcc
aagctcctgaagaagcctgaccagtgccgagccgtcagcatctgcgcccatctcttctgg
tcaggtcgcagcactgaaaaaaacggtgaagagatacgcgatggtaagcgggtgatggag
tgtctaaagaaagccctgaagattgccaaccagtgcatggacccatcgctgcaagtccag
cttttcattgaaatcctcaacagatacgtctgcttctatgagagagaaaacgacgcggtg
actgtccaggtattaaatcagctgatccaaaagataagggaagatcttcccaatctggag
gcaagtgaggaaacggagcagatcaacaaacacttccacaacacactggagcatcttcgc
ctgcagagggaatcccctgagtccgagggtcctgcttatgagggcctggtcctttaa
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