Hippoglossus stenolepis (Pacific halibut): 118104967
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Entry
118104967 CDS
T08308
Symbol
gpc6a
Name
(RefSeq) glypican-6a isoform X1
KO
K08112
glypican 6
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
hsp00535
]
118104967 (gpc6a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
hsp00537
]
118104967 (gpc6a)
Proteoglycans [BR:
hsp00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
118104967 (gpc6a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
hsp00537
]
Others
118104967 (gpc6a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glypican
SpoIVA_C
Serglycin
Put_Phosphatase
ZMYND11_CC
Motif
Other DBs
NCBI-GeneID:
118104967
NCBI-ProteinID:
XP_035008187
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Position
1:complement(10826843..10953736)
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AA seq
570 aa
AA seq
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MCAMWKLQVALCTLPMLLLSLSCAGESKARSCSEVRQAYNAKGFSLVNVPHQEISGEHLR
VCPQGYTCCTSEMEDKLNQQSKQEFENLVDESSHKMRTTFVSRHKKFDEFFLELLDNSEK
SLNSMFTRTYGKLYMQNSEVFQDLFTELKRYYTGGNVNLEEMLNDFWARLLERMFQLLNS
QYHFTDDYLECVSKYTDQLKPFGDVPRKLKAQVTRAFIAARTFVQGLMVGREVANRVAKV
NVAPACVRALTKMLYCPYCRSLPGLKPCHNYCHNVMRGCLANQADLDPEWNVFIDAMLLV
ADRLDGPFNIEGVIEPIDIKISDAIMNMQDNSMQVSAKVFQGCGQPKPSGMGRSARGISD
VFNARFRPYTPQERPTTAAGTSLDRLRVVWRRMQHNVTDIKERLKESRRFWSNLPDDICA
KGKLTESDDEQCWNSHTKGRYFPEVVKEGLTNQVNNPEVDVDITRPDTLIRQQIMALRVM
TNKLKNAYNGNDIYFQDSSDEGSSSGSGSGCSDGCTTEFVFVGTEAPVIGADRSDERAAA
AAAGKSLCCGPSVLLMMAALTLWALQTQWR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcgatgtggaaactgcaagtcgccttatgtactctgccgatgctgctgctgtcc
ctgtcatgtgccggcgagagcaaagcgcggagctgtagcgaggtgagacaagcttacaac
gccaaaggcttcagcctcgtcaatgtgcctcatcaggagatatcaggtgagcacctgcgt
gtctgtcctcagggatacacctgctgcacgtccgagatggaggacaaactcaaccagcag
agcaaacaggagttcgagaacttggtggacgagagcagccacaaaatgaggacgacgttt
gtctccaggcataaaaagtttgacgagtttttcttggagctcctggacaattcggagaag
tccctcaacagtatgttcacgcggacgtacgggaagctgtacatgcagaactcagaggtg
ttccaggacctgttcactgagctaaagcgctactacacgggaggtaacgtcaacctggag
gagatgctgaatgacttctgggcccggctgctggagcgcatgttccagttgctcaactcc
cagtaccacttcacagacgactacctggagtgcgtcagcaagtacacggaccagctgaag
ccctttggggatgtgcccaggaagctcaaggcccaggtcaccagggccttcatcgctgca
cggacgtttgtgcagggcctcatggtcggtcgggaagtcgccaacagggtcgccaaggtg
aatgtcgctcctgcatgtgtcagagccttgaccaagatgctgtactgtccctactgtcgc
agcttgcccggcctgaaaccctgtcacaactactgtcacaacgttatgaggggctgtctg
gccaaccaggcagacctcgatcctgaatggaacgtctttatcgatgctatgttactggtg
gcggacagactggatggacccttcaacatcgaaggagtcattgagccaatcgacatcaag
atctctgacgctatcatgaacatgcaagacaacagcatgcaagtgtctgccaaggttttt
caagggtgtggccaaccaaagccatcgggaatgggccggtctgcacgcggcatctcagat
gtgttcaacgcccgtttcagaccctacaccccccaggagaggccgaccacagcagctgga
acaagcctggatagactgagggttgtctggaggagaatgcaacacaatgtgactgacatc
aaagagaggctgaaggagtccaggaggttctggtccaacctgcccgatgacatctgcgcc
aagggcaaactcacagaatctgacgacgagcagtgctggaacagccacacgaagggcaga
tatttccctgaagtggtgaaggagggtctaaccaaccaggtgaacaacccagaggtggat
gtggatatcaccaggcccgacacactgattcggcagcagatcatggctctgcgtgtcatg
accaacaagctaaagaacgcatataatggaaatgacatctacttccaggactccagtgac
gagggcagcagctccggcagcggcagcggctgctccgacggctgcacaacagagtttgta
ttcgttggaacagaggctcctgtaatcggagctgacaggagcgacgagcgcgcggcagca
gcagccgccggcaagtcgctctgctgcggaccctccgtactcctgatgatggccgccctc
acactttgggcgctgcagactcaatggagataa
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