Hippoglossus stenolepis (Pacific halibut): 118104986
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Entry
118104986 CDS
T08308
Symbol
ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsp03400
]
118104986 (ap5b1)
DNA repair and recombination proteins [BR:
hsp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
118104986 (ap5b1)
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Paralog
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
AP5B1_N
Motif
Other DBs
NCBI-GeneID:
118104986
NCBI-ProteinID:
XP_035008222
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All DBs
Position
3:complement(27566091..27571373)
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AA seq
954 aa
AA seq
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MAVNWADRVSAFSRSPSHFLSGTTAEAFLAELLRELRDDRAGYNVKVLLLSPLCEHPTLL
CPSDSVGEETALELMSVFAQCPPKSVQFRCHLLLALTSVLVCTSCVSSRSPVSQDFLDLL
LRLSQDPGDLHGDGALHSLRATACDCLRELEACSPGYLSQHIELLGGLRQRETSRFHQAY
TGLHTLVLRNAVYHLTQETGAGAEQLKAFLGGNTSVAWEADQDSALTNNTDSGVLFSLIL
GPMGSVPTLQTGPDCKELRSILSSLLEESYLLTPLCQAALLHRLTELVAMVPGVPPAIFR
AQLLRLLGTSKVCLLHTTLLMKCAFTDSLFSAEDEAFILKRLVVLSQHPLLSTPEKLFYM
DCLLHFPENRPISCSDRDETLPVLLTPRLALALMPTVFNDSATMLARLNLQSLVYLEEGE
EGEGGEGRGVANLYEHLMSLLHIVDSGGSREIVVTFFRSAFLFLLYFYHMERYTSSLVEK
LCELYLHHTQLAPHLISLADHTQDSLSESDWAEELLKALQRVITEAPLAQLNLQDLRSHL
KMLARVAEEGKIPQCSTLRFLASIIAPLPSSLCVSGDWRLGTSVLGVCRRLLVHPSLDSL
LVPLADILQDLTCRFGDTDIQDHARLYYALLTTLSREKLTGVLAQGATEGGRQIKKRSMS
NIVAESEGLRSALTIHQTKRAIFSVVEVNSETRQETQADKEGDLSQSETDGCPGEGKAAL
EAYRRQFTDPDFASEITLSYKLAHMPPYDPRFDQVFSIRLHFNLTDDHYEELSDISVPCL
FRERSSPMVKLRLKPLRPYPTTLQASAIFTTQDGLSWHTILPDIHVAFQQVFTPLPAPSA
WGRGGKLYLFEGLWDELCSEGGDCATSLFCCQLKEGALMSLVEKHFLPYLISDWSHKEEF
KVLFFLPPQSHVLLKITTEEDAVHLDIATDNWQLLPHLTSYLLTITSSQDDTHS
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgaactgggccgacagggtctccgctttctcccggagcccctctcacttcctc
tcggggacaacagctgaagctttcctggctgagctgctccgagagctccgagatgacaga
gccggttataatgtgaaggtcctcctgttgtctccactatgtgagcacccaactctgctg
tgtccctcagactctgtgggtgaggagacagccctggagctcatgtcggtgttcgcccag
tgcccccccaaatccgtccagttccgttgtcatctcctgctggccctcacctctgtgctc
gtgtgcacctcctgtgtgagcagccgttcccctgtatctcaagatttcctggacctgctc
ctccggttgtcccaggaccccggtgacctccatggcgacggcgctcttcattctctccga
gccacagcctgtgactgtttgcgggagctagaggcttgttctcccggttatctctcccag
cacattgagctcctgggcgggctcaggcagagagagacctccaggttccaccaggcttac
acaggacttcacactctggtccttaggaatgctgtgtatcatctcacccaggaaactgga
gctggtgctgagcaactcaaagcttttctgggagggaacacatcagttgcatgggaagcg
gatcaggactcagccctgacaaataacacagactcgggtgtactgttctctctcatcctt
gggcccatgggttcagtgcccaccctccagactgggcctgactgcaaggagctgcgttca
atcctgtcttccctcctggaggagtcctacctcctcactcctttgtgtcaggctgcgctg
cttcatagactgacagagctggttgccatggtccctggggtccctccagccatattcaga
gctcagctgctgcgactgctgggcacgagcaaggtttgtctcctccacaccaccctgctg
atgaagtgtgcattcacagacagcctgttcagcgccgaggacgaagcgttcatcctcaag
cgactggtcgtgctctcccagcacccactgcttagtacgcctgagaagctcttctacatg
gactgcctcctgcactttcctgagaaccgtccaatcagctgcagcgacagagacgagacg
ctccctgtgctgctgactccccggctcgccttggctctcatgcccactgtgttcaacgac
agcgccaccatgctggcccgactcaacctgcagtccctggtctacctggaggagggagag
gaaggggaggggggagagggcaggggggtggccaacctctacgaacacctcatgtcactg
ctacacattgtggacagcggaggcagcagagagattgtagtcaccttcttcaggtccgcc
ttcctcttccttttgtacttctaccacatggagcgctacacgagcagcctggttgagaag
ctgtgtgagctctacctccaccacacccagctcgccccgcacctcatcagcctggccgac
cacacacaggacagtctgtctgagtcggactgggctgaggagctcttgaaagcactgcag
cgagtcatcactgaggccccgctcgcccagctcaacttacaggacctccgctctcacctc
aagatgctggcacgagtggcggaagaaggaaaaatcccccagtgcagcaccctcaggttt
ctggccagcatcatcgctccattgccctcctcgctgtgcgtaagtggcgactggcgtctg
gggaccagcgtgctgggagtttgccgccgcctgctcgtccacccgagcctggactcgctg
cttgtccctctggccgacatcctgcaggatctcacctgccgctttggagacacagacatc
caggaccatgcccgtctttactatgccctcctcaccacgctgtcccgggagaagctgacc
ggagtgttggcgcagggtgcgaccgagggagggcggcagatcaagaagcgatcgatgtcg
aacatcgtggctgagagcgaggggctgagaagcgcgctaaccattcaccagacaaagaga
gcaatattcagcgtggttgaggtgaattctgagacacgacaagaaacacaagcagataaa
gaaggtgacttaagccagagtgagacagacggatgcccaggtgagggaaaggcagcactg
gaagcctacagacgtcagttcactgaccctgactttgcctcagaaattaccttgagctac
aaactggctcacatgccgccttatgaccctcgctttgatcaggtcttcagcatccgcctg
cacttcaacctcacagatgaccactatgaagaactgagcgacatcagtgtcccctgcctc
ttcagagagaggtcgtcaccaatggtgaagctgaggctgaagcctctgcgcccctacccc
accacccttcaagccagcgccatctttaccacacaggacgggctctcgtggcacaccatc
ctgcctgacatccatgtggcgttccagcaggtcttcacgcccctgcctgctccctcagcc
tggggtcgtggcggcaaactttacctgtttgagggattatgggatgagttgtgctcggag
ggcggggactgtgctaccagtctgttctgctgccagctaaaggagggagctctgatgtcc
ttggtggagaaacacttcctcccctaccttatttcagactggtcccataaagaagagttt
aaagtgcttttcttcctccccccacagtctcatgtgctgctgaaaatcaccacagaggaa
gacgccgtgcacttagacatcgccacagataactggcagcttttgccacacttaacttct
tatctactgacaatcacatcctcacaggacgacactcacagctga
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