Hippoglossus stenolepis (Pacific halibut): 118105059
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Entry
118105059 CDS
T08308
Name
(RefSeq) LOW QUALITY PROTEIN: intraflagellar transport protein 52 homolog
KO
K19681
intraflagellar transport protein 52
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hsp03037
]
118105059
Cilium and associated proteins [BR:
hsp03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
118105059
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GFIT
Motif
Pfam:
IFT52_GIFT
IFT52_central
ABC_transp_aux
Itf52_C
OST48_N
DUF4350
Motif
Other DBs
NCBI-GeneID:
118105059
NCBI-ProteinID:
XP_047195286
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Position
3:complement(26305715..26310234)
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AA seq
416 aa
AA seq
DB search
MESESHNRVIFNASKREVFTMNNGYKSMQRKLQAQGKIQSMKHELSAKKLKDVKLWITAG
PREKFKASELEVLKHYLDGGGNVLVMLGEGGEIKYDTNINFLLEEFGILVNNDAVVRNVY
YKYFHPKEALVSNGVLNREISRAAGKVVTGIIEDENVGNNAQALTFVYPYGATLNVMKPA
MPVLSTGSDCFPLNRPVLAFYQGKEAGKLVVLGSCHMFSDQYIDKEENSKIMDVMLQWLM
TDNIQLNQIDAEHPEITDYTMLPDTGFLSEQLRVCLPEDDVDPRDFTSLFDMSLLNFSTD
TLPQVISAYKQLSVKDEPLQRITPQFEILPELKPADFPPAVSDLPPPTLELFDLEXRLAQ
LTNKCKYSQRSXVVRKLLDVTPNLDQDQRDSKHTLEHIFLQVGEFLXQEHDIVNET
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgaatcgcacaaccgcgtgatctttaacgcttctaaaagagaagttttcacc
atgaataatggatataaatcaatgcagaggaaactacaagctcaggggaaaattcagagc
atgaaacacgagctgtctgcgaagaagctgaaggacgtcaagttgtggatcactgcaggt
ccgagagagaagttcaaagcatcagagctggaggtgctgaagcactacctggatggagga
ggaaacgtcctggtcatgctcggtgaaggaggagaaatcaaatatgacactaacatcaac
tttctcctggaggagtttggaatactggtcaacaatgatgctgttgtgaggaatgtgtat
tacaaatacttccaccctaaggaggcgcttgtgtccaatggtgtattgaacagagagatc
agtcgggctgctggcaaagtggtcacaggaatcattgaagatgaaaatgttggcaacaat
gcacaggctctgacatttgtgtacccatacggtgccacactaaatgtgatgaagccggct
atgccagttctttctactggttcagactgcttccccctcaacaggcctgtcttggccttc
tatcaaggaaaggaggctggcaaactggttgtgctgggttcgtgccacatgttcagtgac
caatacatcgacaaagaagagaacagtaaaatcatggatgtcatgctccagtggctcatg
actgacaatatccagctgaatcagattgatgcagaacacccagagatcacagattacacc
atgttgccagacacagggttcttgtcagagcagctcagagtgtgtttaccagaggatgat
gtagaccccagggacttcacctctctctttgacatgtctttgttaaatttttcaactgac
accttaccccaagtcatcagtgcctacaaacagcttagtgtcaaagacgagccacttcag
cggatcacaccacagtttgagattctgcctgagcttaaacctgctgactttccacctgca
gtaagtgatctacctccacctacgttggaactgtttgatctggaanaacgccttgcacag
ctcaccaataagtgtaagtacagtcaacgatcatgagttgtgcgcaaacttcttgatgtg
actccaaacttagatcaagatcagagggattccaagcacaccttggaacacattttcctc
caggttggagagttccttntgcaggagcatgacatcgtcaatgagacatga
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