Hippoglossus stenolepis (Pacific halibut): 118105063
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Entry
118105063 CDS
T08308
Name
(RefSeq) parapinopsin
KO
K04251
long/medium wavelength-sensitive opsin
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
hsp04030
]
118105063
G protein-coupled receptors [BR:
hsp04030
]
Rhodopsin family
Vision
Opsin
118105063
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7TM_GPCR_Srw
Motif
Other DBs
NCBI-GeneID:
118105063
NCBI-ProteinID:
XP_035008341
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All DBs
Position
3:complement(14704950..14708001)
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AA seq
339 aa
AA seq
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MQPSYFSPNASSYLGPPGDPPLSRTGFIILSILMALFTGPAIVLNATVIIVSLMHKQLRQ
PLNYALVNMAVADLGTAMTGGVLSVVNNAQGYFSLGRTGCVMEGFAVALCGITSLCTVAL
IAVERMFVVSKPLGQILFQKKHAIGGIALSWLWSLTWNLPPLFGWGRYELEGVGTSCAPD
WHNQDPHNVSYILAYFAVCFAVPCAIIVISYAKLLWTLHQVSKLACVEGGAVAKAEMKVA
FMVILMVLTFLISWLPYAGLAMLAVFNPDMEIHPLVGTVPVYLAKSSTVYNPIIYIFLNK
QFRKYAVPFLLCGKEPWDQDDESEAETTVETATNKVSPS
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgtcttacttttcaccaaatgcttcctcgtaccttggcccaccgggggatccc
cctctgtcacgcacaggcttcatcattctctccatccttatggctcttttcactggtccg
gccatcgtactcaacgctacagtgattattgtgtctctgatgcacaagcagctgaggcag
ccactcaactacgctctggtgaacatggctgtggctgacctgggcacagccatgactgga
ggggtgctgtctgtggtcaacaatgcccaggggtacttctccctgggcagaacaggctgt
gtgatggagggcttcgcagtggccttgtgtggcatcacatctctgtgcacagtcgctctg
atcgcagtggagaggatgttcgttgttagtaagcctctgggtcagatattgttccaaaag
aagcatgcgattggaggtattgccttgtcctggctgtggtcgctcacctggaacctgccc
ccactgtttggctggggcaggtacgagctggagggtgtggggacgtcctgcgcaccggac
tggcacaaccaagaccctcacaacgtgtcttacatcctggcttacttcgcagtgtgtttc
gcggttccttgtgccatcattgtgatatcctacgcaaaactgctgtggacgttacatcag
gtatctaagctggcctgtgtggagggcggtgcagtcgctaaagcagagatgaaggtggcg
ttcatggtgatcctgatggtcctgacgtttctgatcagctggttgccttatgccggcctg
gccatgctggcggtcttcaaccctgacatggagatccacccgctggtgggcacagtgccc
gtctacctggccaagagcagcactgtgtacaatcctattatctacatcttcctcaacaaa
cagttccgtaagtacgctgtgcccttcctgctgtgtgggaaagagccctgggatcaggac
gacgagtcggaggcagaaacgactgtggagactgcgacgaacaaagtatctcccagctga
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