Hippoglossus stenolepis (Pacific halibut): 118105088
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Entry
118105088 CDS
T08308
Name
(RefSeq) blue-sensitive opsin
KO
K04252
short wavelength-sensitive opsin
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
hsp04030
]
118105088
G protein-coupled receptors [BR:
hsp04030
]
Rhodopsin family
Vision
Opsin
118105088
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srx
7TM_GPCR_Srv
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
118105088
NCBI-ProteinID:
XP_035008380
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All DBs
Position
3:24088745..24090643
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AA seq
353 aa
AA seq
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MKHGRVMELPEDFWIPVPLDTNNITTLSPFLVPQDHLASSATFYAMAIYMFFVFVLGTSI
NALTILCTVKYKKLRSHLNYILLNLAVGNLLVSCVGSFVGCCAFSVKYFFFGPLACKIEG
FMVTLGGMVSLWSLAVIAFERWLVICKPLGNFVFKPDHAIACCAFTWVFALIASAPPLFG
WSRYIPEGLQCSCGPDWYTTNNKYNNESYVIFLFCFCFAVPLTTILFCYSQLLITLKMAA
KAQAESASTQKAEREVTRMVVVMVMGFLVCWLPYASFALWVVNNRGQTFDLRFATLPAVF
SKSSAVYNPVIYVLLNKQFRSCMMKMMGMGGGDDEESSTSQTSVTEVSKVGPA
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgaagcacggccgggtcatggagcttccagaggatttctggatccccgtccctttggat
acgaacaacatcacgactctcagccccttccttgtcccccaggaccatctagcaagctca
gccaccttctacgccatggccatatacatgttttttgtatttgttttgggcactagcatc
aatgctctcaccatcctgtgcaccgtgaaatacaagaagctccggtcccacctcaactac
atcctgctgaacttggctgtggggaaccttctcgtgtcctgtgtgggctcctttgttggc
tgctgcgcattttcagtcaaatattttttctttggaccactagcatgcaagattgaaggt
ttcatggtgacacttggtggtatggtcagcctgtggtctctggctgtgatagcttttgaa
agatggctggtcatctgcaagccattaggtaactttgttttcaagcctgaccatgctata
gcttgctgcgcattcacctgggtgtttgcacttattgcctcagctcctccactgttcgga
tggagcaggtacatcccggagggtctgcagtgctcctgtggaccggactggtacaccaca
aacaacaaatacaacaatgaatcctacgtgatattcctcttctgcttctgctttgccgtt
cccctcaccaccatcctcttctgctactcacagctgctcatcacactgaaaatggccgcg
aaggctcaagcggagtctgcctccacccagaaggcagaaagggaggtgaccaggatggtg
gtggtcatggtgatgggcttcttggtgtgctggttgccctacgccagttttgctctgtgg
gtcgtgaacaatcgtgggcaaacgtttgacctgagatttgctactctgccagctgtcttc
tccaaatcctctgcggtctacaaccctgtcatctatgttttactcaataaacagttccgt
tcatgcatgatgaagatgatgggaatgggtggaggtgatgatgaagaatcttcaacatca
cagacctcagtcaccgaagtctccaaagttgggcctgcttag
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