Hippoglossus stenolepis (Pacific halibut): 118105115
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Entry
118105115 CDS
T08308
Symbol
rpn1
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1
KO
K12666
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 1 (ribophorin I)
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp00510
N-Glycan biosynthesis
hsp00513
Various types of N-glycan biosynthesis
hsp01100
Metabolic pathways
hsp04141
Protein processing in endoplasmic reticulum
Module
hsp_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
118105115 (rpn1)
00513 Various types of N-glycan biosynthesis
118105115 (rpn1)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118105115 (rpn1)
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Motif
Pfam:
Ribophorin_I
DNA_repr_REX1B
GTP-bdg_M
Motif
Other DBs
NCBI-GeneID:
118105115
NCBI-ProteinID:
XP_035008422
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Position
3:complement(23027713..23033602)
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AA seq
600 aa
AA seq
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MALKAPVLAALLLLVAAVGSGVSADGLVNEEVKKTVDLSSHLAKMTAEIALSNQGHTGVQ
SFILAVEADLAPHLAYIGASVKGDEGGDGMLELQQTSIQGQRGEFYRVQLPSTLPAGAQL
MVKVEMTFSHVLKPFPTHITQAERQLVVFQGNHYLYSPYPTRSQTTRVRLASKTVETYTK
LGNPTKTDEFIDYGPFRDVAPFSEDAMKLHFENNSPFLTISSITRLIEVSHWGNIAVEET
VDLRHTGAALKGPFSRYDYQRQSDSGISSVKSFKTILPASAQDVYYRDEIGNISTSHLQV
LDDSVEVEVRPRFPLFGGWKTHYIIGYNLPSYEYLYTLGDQYALKMRLVDHVYDDQVIDS
MTVKIILPEGARNIHVETPYKIDRMPNQLHYTYLDTFGRPVLIASKNNLVEQHIQDVVVH
YNFNKILMLQEPLLVVAAFYILFFTVIIYVRLDFAITKDPAAEVRMKVASITEQVLTLVN
KRLGLYRHMDEVVNRYKQSRDTGALNSGRKTLEADHRALTNEISSLQARLKAEGSDLAEK
VGEVQKLDGQVKELVCRSCQEAERLVAGKVKKEAYIESEKTLTSKRQELVSRIDSLLDAL
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggctctgaaggcgcctgtgctcgccgccttactgctcctggtagccgctgtgggctcg
ggggtttcagcggacggtttggtgaacgaggaggtgaagaagaccgtggacctgagctcc
catctggcgaagatgaccgcggagatcgcgctgtccaaccagggacacaccggggtccag
agcttcatactggcggtggaggcggacctggccccgcacctggcttacatcggagcatcg
gtgaagggtgatgaaggaggggatggcatgctcgagctccagcagacatcaattcagggc
caacgtggggagttttacagagtgcagctgccctccactctgccagctggtgctcagctg
atggtgaaggtggaaatgacattcagccatgtactgaagcccttccccacacacatcact
caggccgagcgccagctggtggtgtttcagggaaaccactacctgtactcaccatacccc
acacgcagccagaccacacgtgtccgcctggcctccaaaactgtggagacctacaccaag
ctcggcaaccccaccaagacagatgagtttattgattacggacccttccgtgatgtggcc
ccgttcagtgaggacgcgatgaaactccatttcgaaaacaactcccccttcctcaccatc
agcagcatcactcgcctcattgaggtgtctcactggggcaacattgctgtggaggagaca
gtcgacctgaggcacacaggagccgccctgaagggcccgttctcacgttacgattaccag
cgtcagtcagacagtggcatctcatctgtcaaatccttcaagaccatcctccctgcctca
gcccaggatgtctactacagagatgagatcggaaacatctccacctcccaccttcaggtt
ctggacgactcagtggaggtggaggtcaggcctcgcttccccttgtttggaggctggaag
actcattacatcattggctacaatctgcccagctacgagtacctctacaccctgggtgac
caatatgcactgaagatgagactagttgatcacgtgtacgatgatcaggtcatcgactcc
atgacggtgaaaatcatccttccagagggagcaagaaacatccatgtggaaacaccgtac
aaaattgatcggatgccaaaccagctgcattatacatatcttgatacctttggccgacct
gtgctgatcgccagcaagaacaacctggtggagcagcacattcaggatgttgtggttcat
tataacttcaataagatcctgatgctgcaggagcctctgttggttgtcgcggccttttac
attctcttcttcactgtcatcatctatgtccgccttgactttgccatcacaaaggaccct
gctgctgaggtacgcatgaaggtggcctccatcacagagcaggtgctgactctggttaac
aaacgtctgggtctgtacagacacatggacgaggtggtcaaccgctacaagcagtcccgc
gacaccggggcgcttaacagcggacggaagacgctggaggctgaccaccgcgctctcacc
aacgaaatcagctcgctgcaggcccgcctcaaagccgagggctctgacttggctgaaaag
gttggcgaggtgcagaagctagatggccaggtgaaggagctggtgtgtcgctcctgccag
gaggcggagcggctggttgcgggtaaggtcaagaaggaggcgtacatcgagagcgagaag
actctgaccagcaagagacaggagcttgtcagtcgcattgacagtctgctggatgccctc
taa
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