Hippoglossus stenolepis (Pacific halibut): 118105216
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Entry
118105216 CDS
T08308
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118105216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsp03021
]
118105216
03036 Chromosome and associated proteins [BR:
hsp03036
]
118105216
Transcription machinery [BR:
hsp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
118105216
Coactivators
SAGA/TFTC/STAGA complex
118105216
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
118105216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
118105216
NCBI-ProteinID:
XP_035008613
LinkDB
All DBs
Position
3:23316601..23327638
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AA seq
806 aa
AA seq
DB search
MDASTDSTAGNDPGKKTLVAGGGATSPHPGKVGSVQTCNGSQTMNSSGSAAAHGAAAVSV
AAVSSGALVSKGLSAAIMPPVSTTVIQTPLMHSQSVVSSTQPVNQAAGATVTLVRPPMQT
AGSGATLNGNNNVVAAGATGQSGVNNVQHSTPGSFSARPHIIKAEPPTTIIQTAPHPAVT
SAPFSSPRFPATVAFGPGGTRALTPQMLSPRLPQPPTAQPSVQNFQIPPGMVIIRHESGQ
LLMIPQQALAQMQAQPQGGMTPRPATQTNVPLGQAPGNISRQVAPSTIIRQGCPAPATLA
ATTTLHRPPILQSSVGAAVPGMTPRTFSQTAGTTVTSVTLSKETMENVNKCKSFLSTLIK
LASNGKQSTQTAATVRELTKDLLEGKLEPEEFTSSLYKELNSSPQPYLVPFLKRSLPALR
QLTPDSDAFIQQSQLPQLVSGPVSSTSLTPTTVVLSSPAPRLTAPISRPQLQPGISKQGQ
TASLVLQLQQQRATVRPQVTLPTTPMVMLRNQAPGRIMLGQQQVQLRELQPTAFTAAHKN
KLREAGGTFKDYDDINDVASMAGVNLSEESANILASNSALVGAVTHSCKDEPFLSCSLLQ
KRMLEIGSRYGVTNLGAEVVNFVSHATQQRLQNLLENVSHVAQQKNVNFKEDDKHEQNSD
VRAQLKFFDQLDHLEKQRKEEQEREILLKAAKSRARQEDPEQLRLKQKAKEMQQQELAQM
RQKEANLTALAAIGPRKKKRILDSQSASAAAEGSGAGPSLPGGAGASSSRPTRQRITRVN
LRDLLFCLENEKSTSHSHFLYKGFLK
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggacgcatcgacggactccaccgcaggaaacgatcctggcaaaaaaacacttgttgct
ggcggtggtgcaacttcccctcacccggggaaagtaggctcagtgcagacctgcaatggg
agccaaaccatgaactcttcaggaagcgctgccgctcacggggctgctgccgtgtctgtg
gcagctgtcagcagcggagcgctggtgtctaaagggctgtccgctgccatcatgccgccc
gtctccaccaccgtcatccagacgcctctcatgcactctcagagtgttgtgtcctcgact
cagcctgtgaaccaggcggcaggagccaccgtgacgctcgtcaggccgcctatgcaaacc
gccgggtcgggtgcaactttgaatgggaacaataatgtggtggcggccggtgcaacagga
cagtcaggtgtaaacaatgtccagcattccaccccgggctctttcagcgcccggccgcac
attatcaaggcagagcctcccacaacgatcatacagacagccccgcatcccgctgtcacc
tccgcccccttcagctccccccggtttccggcgaccgtggctttcggtccaggtgggacc
cgagcgctgacccctcagatgttgtccccgaggctcccgcagccccccacagcgcagccc
agtgtgcaaaacttccagattcccccggggatggtgattattcgccatgagagtggacag
ctgctgatgattcctcagcaggctctggcccagatgcaggcccagccgcagggaggcatg
acacctcgacctgcaacacaaaccaacgtgcctcttggtcaggctcctggaaacatcagc
agacaagtggctcccagcaccatcatccgacagggctgtcccgctccagcaacactcgct
gcgaccaccactcttcacagacctcctattcttcagagctcagttggggctgcagtacca
ggaatgacccccaggactttcagccaaacagctgggaccacagttacctcagtaacactg
agcaaagagacaatggagaatgtaaataaatgtaagagcttcctgtctacattgataaaa
ctggcttccaatggcaagcaatcaacacagactgcagccaccgtgagagagctgactaaa
gacctgttggagggaaaactggaacctgaggagttcaccagcagtttgtacaaagagctc
aattcctcaccccaaccttaccttgtgcctttcctcaagagaagcctcccagccttgagg
cagctcactccagactcagatgcattcatccagcagagtcagctcccccagctggtctca
ggtccagtctcctccacctcattgacccccaccacggtggtcctaagcagccctgcccct
cgtcttactgccccaatcagcaggccgcagctgcagccaggcatcagcaagcaaggacag
accgcttccctggttctgcagcttcagcagcagagggcgacagtgagacctcaggtaacc
ttaccaacgacccccatggtgatgctcaggaatcaggcccctggccgcatcatgctagga
cagcaacaggtccagctcagagagctgcaaccaacagccttcactgcagctcacaagaac
aagctaagagaggctggcggcactttcaaggattatgacgacatcaacgatgtggcctcc
atggctggagtgaacctatcagaggaaagcgccaatatcttagcatccaattctgcactc
gtgggagcggtgacacattcctgtaaggatgagcctttcctctcctgctccttgttgcaa
aagaggatgctggagatagggagtaggtatggtgtgactaacctgggtgcggaggtggtg
aactttgtctcccatgctactcagcagcgactccagaacctgttagaaaatgtttcccac
gtggcccagcagaaaaatgtcaactttaaggaggatgacaagcatgagcagaacagtgac
gtgcgtgctcagctgaagttctttgaccagctggaccatctagagaaacaaagaaaagag
gagcaggagagagagatcctcctgaaggcagctaagtctcgagctaggcaagaggaccca
gagcagctgcgcctgaaacagaaagcaaaagagatgcagcagcaggagctggctcagatg
agacagaaggaggccaacctgacggcactggcagccatcggccccagaaagaagaagaga
atcctggactctcaatccgcctctgctgcagctgagggatcaggagcaggcccctctttg
cctggtggggcgggtgcgtccagctccagacccacgcggcagcggatcacacgcgtcaat
ctcagggacctgctcttctgtttggagaacgagaaatctaccagtcactctcatttcctc
tacaagggctttctgaaatag
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