Hippoglossus stenolepis (Pacific halibut): 118105217
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Entry
118105217 CDS
T08308
Name
(RefSeq) red-sensitive opsin
KO
K04251
long/medium wavelength-sensitive opsin
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
hsp04030
]
118105217
G protein-coupled receptors [BR:
hsp04030
]
Rhodopsin family
Vision
Opsin
118105217
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
Motif
Other DBs
NCBI-GeneID:
118105217
NCBI-ProteinID:
XP_035008616
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Position
3:24106778..24109147
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AA seq
357 aa
AA seq
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MAEAWGKQAFAARRYHEDTTRGSAFVYTNSNHTRDPFEGPNYHIAPRWVYNMATLWMFFV
VIASVFTNGLVLVATAKFKKLRHPLNWILVNLAIADLGETVFASTISVCNQFFGYFILGH
PMCIFEGYTVSVCGIAALWSLSIISWERWVVVCKPFGNVKFDAKWATGGILFSWIWSAVW
CAPPIFGWSRYWPHGLKTSCGPDVFSGSEDPGVQSYMIVLMVTCCFLPLSVIILCYLAVW
WAIHSVALQQKESESTQKAEKEVSRMVVVMIVAYCVCWGPYTAFACFAAANPGYAFHPLA
AAMPAYFAKSATIYNPVIYVFMNRQFRTCIMQLFGKEVDDGSEVSTSKTEVSSVAPA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcgtggggaaaacaggcgtttgctgccaggcggtaccatgaagatacgaca
aggggatctgcctttgtatacacaaacagcaaccacaccagagatccttttgagggtccc
aattaccacattgctcctcgatgggtttacaacatggcaaccctctggatgttttttgtg
gtcattgcgtcagtcttcacaaatggtcttgtcttggtggccacagctaagttcaagaaa
ctccgtcacccactgaactggatcttggtcaatctggcaatcgctgatcttggagagaca
gtttttgccagcaccattagtgtatgcaaccagttttttggttacttcattctgggacac
ccaatgtgcatctttgagggctatactgtctcagtgtgtggaattgctgctctctggtcc
ctgtccatcatctcctgggagagatgggtagttgtctgcaaaccttttggaaacgtcaag
tttgatgccaaatgggccacaggtggaattttgttctcctggatctggtcagcagtgtgg
tgtgctcccccaatctttggctggagcaggtactggcctcatggactgaagacttcctgt
ggacctgatgtatttagtggaagtgaagaccctggagtccagtcctacatgattgttctt
atggttacatgttgtttccttcccctgtctgttatcatcttgtgctaccttgccgtctgg
tgggccatccattctgttgcgctgcagcagaaggaatcggagtcaacccagaaagctgag
aaagaagtgtccagaatggtcgttgtcatgatcgtggcatattgtgtctgctggggacct
tatacagcctttgcctgctttgctgcggccaaccctggatatgccttccaccctctggct
gctgccatgcctgcatactttgccaagagcgccaccatttacaaccctgtcatctatgta
ttcatgaaccgacagttccgcacatgcatcatgcaactctttggcaaagaagtggatgat
ggttctgaagtatccacatcaaagacagaggtctcatctgtggctcctgcataa
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