Hippoglossus stenolepis (Pacific halibut): 118105228
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Entry
118105228 CDS
T08308
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 5 isoform X1
KO
K05724
FYVE, RhoGEF and PH domain containing 5/6
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
118105228
Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
118105228
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
FYVE
PH
SOS1_NGEF_PH
RHG20_PH
FYVE_2
Motif
Other DBs
NCBI-GeneID:
118105228
NCBI-ProteinID:
XP_035008634
LinkDB
All DBs
Position
3:complement(16361200..16382946)
Genome browser
AA seq
1517 aa
AA seq
DB search
MRIAAASLERDVGAARFLDKMNTDCTKPSVAPTTRFVCHANLKLPSPLMSAPRGPKPTIA
PKPKLTPEINGNRGVCSNGSLLTSDGEADEEHETQNGLNGGITAEEQFNTTVLKSPLKDL
QNVSRGLEDGEVTEEEKEMEEDVIQKMDEDWRLTDSALTEEPDSLETLWVSAELTADPKE
VVEMIDADLTEDMDAEGCDAGEALADTDGLSVGDISVNSIDEEAGGSSAVIRDVKERQEK
LQIKEVEAGDCTADDLTESLTDEPGFPINKNMKDTDTQQGFLTDGEEREEESVSDCGITC
NILKLRCGRKMQEKGENLQNISFYDFIPEDQKHFCDTAKKHVALEEDSIQEPYYVSSNDI
INREMMARNNKADGVPDSPQTPQKLSSVSAGNYEETAENGQIECVSFENYVTIINSDGYG
CENGEKNKVRRTCQKWQSFKTEEHKAHTTEAFLNDLDYQPRFRLVSISVPTDTDTSLTSS
LSVSQLLSPSDSDVFRDDDDLDGHIVPFLDDTTDTEQDIVDDHVYEEPGHSAGNGNIFAL
DRKATRMQIRSMSHHINNNVAEVGMQYVPSPYMSGFGQPALSSSPMLNSVRHNSYSKPHY
LSLYPRSLSMEAQDMPLCAYRDKEEPHRQRGAICSSGSFSRCSPLSCSGLSTPTSVVDIP
PPFELAYITKRPITKSSPSLFIEGDSSEKNRKKKSSIKRFLMLKFRRKTESKSVVDVSPC
SSKSSAESSHHTPSRLLDLDRHSLSRSPQLNSHSTSRHQVSIEPTSNFLLYNESKRKSNA
VAFLNRSVIRVESFEDRSRVPFIPLPLTKPRSISFPNTDTSDYENVPAISSDYENVQVSQ
RRTIPRGPFTDFFDRPASNRVLSSANDTDGYVDMSSLPGFKSRTQSPEEETESAYTEAYN
VCSVAVSPQTGSVGDVRGETTGEEEQGRTSEEEDGGADSNYNRQADGRSRAFYVAKELVD
TERLHVKALKLLQEDFREAVGAAVGDEGEPVVEEERLREILNELPDVYTLHRRILTELEN
RIRHWEESQRIADIFLSRKAEFLVFTTYIGHYDRSMNLLEDSCRTSPCFAAIVHQFEQQS
PVGEKVSLKQQLLQVIVRVVQYRMLLTDYLNNLSPDSKEYEDTQAAVAIVSDIEDQVNDS
LKHGENLLRLVNIEYSVHGQRDLLQPGRVFVKEGTLMKVSRKCQQPRHLFLMNDVLLYTY
PQQDGKYRLKNTLPLTGLKVSKPIIENVQNALKIEGTDISITLSASSFIEREDWFYTLSR
TVTEHTRGSAAFNSCSGEARDRLHLSLGEKAPTLVPVSQVMMCMNCTADFSLTLRRHHCH
GCGRIVCRSCSRNRYPLKYMKDRMAKVCDHCYNELKKRGVDVSALTGKGSPRANRSSRPI
SAVFQNIHPPNIWRHRKGTLSFNQVTVSEEGSVSGTLQRSKKSKRNWKRLWFLLKDKVLY
TYRAQEVRGNMHSPLTYSAFTHALKSGHFPETVCEKANVRVSPCENTAGKCLEIQFDVLM
FLTCDNRKTGRKQISQD
NT seq
4554 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcgcagctgcttctttggagcgagatgttggagctgctcgcttcctcgacaag
atgaacacagactgcaccaagccttctgttgctccgacgacaagatttgtttgtcacgcc
aacctgaagctgccctcccctctcatgtctgcacccaggggtcccaaacctaccatcgcc
ccgaaacctaaactcacaccagagattaatggcaaccgaggagtatgcagtaatggcagt
ttactaacttcagacggtgaggctgatgaagagcacgagacgcagaatggtctaaacgga
gggattacagcagaggaacaatttaacaccactgtcctaaaatcaccactaaaggatttg
cagaatgtgtcacgagggctggaggacggagaggtgacagaggaagaaaaggaaatggaa
gaagatgtgattcagaagatggatgaggactggagattaacggacagtgcgttaacagag
gagccggactccctggaaacactgtgggtcagtgctgaactcacggctgaccctaaggag
gttgtggaaatgattgacgcagacctaacggaggacatggacgctgaagggtgtgatgca
ggtgaggcgctggctgacacagatggcctctcagtgggagatatttccgttaatagcatt
gatgaggaggcgggaggctcttctgctgtaattcgagacgtgaaggagaggcaggaaaag
ctccaaatcaaggaggttgaagcaggcgactgcacagcagatgatttaactgagtccctc
acagatgaacctggtttccccatcaacaaaaacatgaaggacactgatacacaacaaggt
ttcctaacagatggagaggagagggaggaggaatctgtttcagactgtggcatcacttgc
aacatcctcaagttgcggtgtggccgtaaaatgcaggaaaaaggcgaaaacctacagaac
attagtttttatgactttatccctgaagaccagaaacacttctgtgatacagcaaagaaa
catgttgccttagaggaggattcaatccaagagccttattatgtttcttcaaatgacatt
attaacagagagatgatggcaagaaataacaaagccgatggagtgccagatagtccacaa
acacctcagaagctttcgtctgtatcagctgggaactatgaggaaacggcggaaaatgga
caaatcgaatgtgtatcttttgagaattacgtgacaattattaacagtgatggatacggc
tgtgaaaacggtgagaagaacaaggtgagaagaacatgtcagaaatggcagtctttcaaa
actgaagagcacaaagctcatacaacagaggccttcttgaacgatttggactaccagccg
aggttcaggctggtgtccatctcagtgccaacggacactgacacctcgctgacctcttct
ctctccgtaagccagctactttccccgagcgactcagacgtctttcgagacgatgatgac
ttggacggtcacatagtcccatttctggacgacactactgatacggagcaggacatcgtt
gatgatcatgtttacgaggagccggggcacagtgcaggcaatggaaatatttttgcattg
gatagaaaggccacaaggatgcaaattcgctcaatgtcacaccatattaataacaacgtg
gctgaggtaggaatgcagtatgttccgagcccctacatgagtgggttcggacaacctgct
ctgagcagcagccccatgttaaactcagtgcggcacaatagctattccaaaccccactat
ttgtccttgtacccccgctccctctccatggaggcacaagacatgcctctgtgtgcttac
agagacaaagaagagcctcacagacagagaggagccatttgttcttctggaagcttctcc
agatgctctccactgtcatgcagtggcctgtccactccaacatctgtggtagatattcct
ccgccatttgaactggcctacatcaccaagaggcccatcacaaagagttccccctcactt
ttcattgagggagactcatcagagaagaacaggaaaaagaaatcctccattaagcgtttc
ctgatgcttaagttcaggcggaaaactgagagcaagtctgttgtggatgtcagcccgtgt
tcctccaagtcctcagcagagtccagccaccacacgcccagcagactgctggatttagat
agacacagcttaagtaggtctccgcagctcaactcacactctacaagtagacatcaagtt
tcaattgagccgacctccaacttcttgctctacaacgaaagcaaaagaaaaagcaacgct
gtggcattcctcaatcgcagcgtcatccgagtggagtcctttgaggaccgttcccgtgtg
cctttcatacctcttcccctgaccaagcctcgctccatctccttccccaacacagatacc
tccgactatgagaatgttcctgccatcagctcagactatgagaacgtccaggtctcacag
cggaggactattccacggggacctttcacagacttctttgaccgtccagcctccaatcga
gtgctgtcgtctgccaatgacacggacggttatgtggatatgagcagcctcccagggttt
aagagcagaactcagtcacctgaagaggaaacagaaagtgcctacacagaagcctacaac
gtgtgctcggtggccgtcagtccacagactggttcagtgggtgatgtcaggggagagacg
acgggtgaggaggagcagggccgcacctccgaggaggaagatggaggcgcagacagcaat
tataacagacaggctgacggacgatccagagccttttacgtagcgaaagaactggtggat
acagagagattgcacgtgaaagccctcaagcttcttcaggaagactttcgggaagcggtg
ggggcggctgtcggggacgagggcgaacctgtggtggaggaagagagactacgagagatt
ctcaacgagcttccggacgtttacaccctgcaccgcagaatcctcaccgagctggagaat
cgaatccgacactgggaggagagccagaggatcgctgacatcttcctgtccagaaaagca
gagttcttggtttttaccacctacatcggacactacgaccggagtatgaacctgttggag
gacagctgccggacttcaccttgctttgctgcgattgttcaccagtttgagcagcaaagt
ccagttggggaaaaggtttctctcaaacagcagctcctgcaggtcattgtgcgagttgtt
cagtatcggatgctcctcactgattacctgaacaacctctcccctgattccaaggagtat
gaagacacccaagcggctgtggcgattgtgtcggacattgaggatcaagtaaacgacagt
ttaaaacatggggagaacttgttgcgtctggtcaacatcgagtacagtgttcacggccag
cgcgacctgctgcagcctggcagggtctttgtgaaggagggcaccctgatgaaggtcagc
aggaagtgtcagcagcccaggcatctgtttttgatgaacgacgtgctgctctacacctac
cctcagcaggatgggaaatacaggctgaagaacacgctgcctctcactgggttaaaggtc
agtaaacccatcatagagaatgtccaaaatgcactgaagattgaaggaacagacatctcc
atcactttgtctgcaagttctttcattgaaagagaggactggttttacactctgagccgc
actgtcaccgaacacaccagaggatctgccgccttcaacagctgctcaggagaagccaga
gatcgtctgcatctgtctctcggagagaaagctcccacacttgttccagtctctcaagtg
atgatgtgtatgaactgcacggcagatttcagcctcacccttcgtagacatcactgtcac
ggctgtgggagaattgtctgtcgaagctgctccaggaacagatatccactgaaatacatg
aaggaccgcatggctaaagtgtgtgatcactgctacaatgagctaaagaagagaggtgta
gatgtgtctgcactgacaggtaaaggcagccctcgtgcaaaccgctccagtcgtcctatc
tctgctgtgttccaaaacattcatccaccaaacatctggaggcatcggaaaggcaccctc
tccttcaaccaggtgacagtgtcagaggaaggctccgttagtggcactctacagcgcagc
aagaagagcaagcggaactggaagagactgtggttccttctaaaagacaaggtgctttac
acctatcgagctcaagaggtgaggggaaacatgcactcccctttaacctactctgctttc
acacatgcactgaaatctggacattttcctgaaactgtatgtgagaaggcaaatgtccga
gtgagcccatgtgagaatacagcaggaaaatgtctggaaattcaatttgatgtgttgatg
tttctaacatgtgacaatcgcaaaactggaagaaaacaaatatctcaggattaa
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