Hippoglossus stenolepis (Pacific halibut): 118105240
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Entry
118105240 CDS
T08308
Symbol
edem1
Name
(RefSeq) ER degradation-enhancing alpha-mannosidase-like protein 1
KO
K10084
ER degradation enhancer, mannosidase alpha-like 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118105240 (edem1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
hsp04091
]
118105240 (edem1)
Lectins [BR:
hsp04091
]
M-type lectins
118105240 (edem1)
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GFIT
Motif
Pfam:
Glyco_hydro_47
Motif
Other DBs
NCBI-GeneID:
118105240
NCBI-ProteinID:
XP_035008653
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Position
3:13100582..13108129
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AA seq
638 aa
AA seq
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MQWRSIVVGLVVLRLSLGWVLWLAFGLGPNVICGFNFQLGFNLRKLDVLFGEEKGSEPGG
GSWSQRVHGPRYEESATTCAKPEEDSPRRPYLSFFDGNKDEYVRRYSSFPDALKAEMKDM
ARDMFYFGYDNYMKYAFPEDELNPIACEGRGPDVLNPSNININDVLGNYSLTLIDTLDTL
LVLGNVTEFQRAVKLVIETVSFDKDSTVQVFEANIRILGSLISSHILLTDPKHPFGKVGL
EGYDNELLHLAHDLAVRLLPAFENTSTGIPYPRVNLKTGVPADSINETCTAGAGSLLVEF
GILSRLIGDSTFEWVARRAVRALWKLRSNETGLLGNVVNIQTGQWVGKQSGLGAGMDSFY
EYLLKSYILFGEKEDYRMFQASYESIQNHMRRGRESCNEGEGDPPLYVNVNMFSGEIMNT
WIDSLQAFFPGLQVLNGDIDNAICLHAFYYAIWKRFGALPERYNWQLQAPDVHFYPLRPE
LVESTYLLYQATKNPFYLHVGMDILQSLEKNAKVRCGYATLHHVVDKSKEDRMESFFLSE
TCKYLYLLFDEDNPLHHSDNKYIFTTEGHIVPIDKRFREKQWNDLFPCEEGALAETEPNS
RPPSSNFSNCSRIPEERRYTLPLKSVYMRQIDHMVGLF
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgcaatggaggtcaatagtggtcggtctcgtggtgctgaggctctccctcggctgggtg
ctgtggctcgcgttcggactgggacccaacgtcatctgcgggttcaacttccagctcggc
ttcaatctgcgcaaactggatgtgctgttcggggaggagaaggggagcgagccggggggc
ggctcgtggtcccagcgggtccacggccccagatatgaggagtcggcgaccacctgtgcc
aagcccgaggaggactcgcccaggagaccctacctgagcttcttcgacggcaacaaggac
gagtacgtgcggcgatacagctcgttccccgacgccctgaaagccgagatgaaggacatg
gccagagacatgttctacttcggatacgacaactacatgaaatacgctttccccgaggac
gagctgaatcccatcgcctgtgaagggaggggacccgacgtgctgaacccgtcaaacatc
aacataaacgatgtcttggggaactactccctgacgttaattgacaccttagacactctg
ttggtgcttggcaacgtgacagagttccagagagccgtcaagctggttatagaaactgta
tcttttgataaggactcgacggtgcaagtttttgaggcaaacataaggatcttgggaagt
cttatctcctctcacatcctgctgactgacccaaaacatccgtttggcaaagtgggcttg
gaaggttacgataatgagctgcttcacctggctcatgacttggctgtccgcttactgccg
gcctttgagaacaccagcacaggcattccttaccccagggtgaacctgaagactggtgtc
cccgctgacagcatcaatgagacttgcactgcaggagctgggtccctgctggtggagttt
ggaattctgagccgcttgatcggcgattccacatttgagtgggtagccagacgagcagtt
agagctctgtggaagctgaggagcaatgaaaccggtctgttaggtaatgtagttaatatc
caaacgggccagtgggtcgggaagcagagtggcctcggagctggtatggactcattctat
gagtacctgctgaaatcatacatcctttttggggagaaagaggactacaggatgtttcaa
gcttcttatgagagcatacagaaccacatgaggagagggagagagtcgtgtaatgaaggc
gagggtgacccgcctctctacgttaatgtgaacatgttcagtggggaaattatgaacacc
tggattgactctcttcaggccttctttcctgggctgcaggtgctgaatggtgatatagat
aacgccatttgcctacatgccttctactatgccatctggaagcgcttcggggcgttgccg
gagagatacaactggcagctgcaggctcctgacgtgcacttctaccccttgagaccagag
ctggtggagtcgacctatctgttgtaccaggcgaccaaaaatcctttctacttgcatgtt
ggaatggatattctccagagccttgagaaaaatgccaaagtcagatgtgggtacgccact
ctccaccacgtcgttgacaaatccaaagaggatcgtatggagagcttcttcctcagtgag
acctgcaaatacctttacctgctctttgatgaggacaacccacttcatcactccgataac
aagtacatcttcaccacagagggccacatcgtgcctatagacaagcgcttcagggagaag
cagtggaatgatttgtttccgtgcgaggagggggcactggcagaaacagagcccaactcc
cggccaccttccagcaacttcagcaattgtagcaggatcccagaggagcgacggtacact
ctgccactgaagagtgtctacatgaggcagatcgaccacatggtgggacttttctaa
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