Hippoglossus stenolepis (Pacific halibut): 118105246
Help
Entry
118105246 CDS
T08308
Symbol
itgb6
Name
(RefSeq) integrin beta-6 isoform X1
KO
K06589
integrin beta 6
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04510
Focal adhesion
hsp04512
ECM-receptor interaction
hsp04810
Regulation of actin cytoskeleton
hsp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118105246 (itgb6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118105246 (itgb6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118105246 (itgb6)
04810 Regulation of actin cytoskeleton
118105246 (itgb6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsp04147
]
118105246 (itgb6)
04515 Cell adhesion molecules [BR:
hsp04515
]
118105246 (itgb6)
Exosome [BR:
hsp04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
118105246 (itgb6)
Cell adhesion molecules [BR:
hsp04515
]
Integrins
Integrin beta subunits
118105246 (itgb6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
EGF_TEN
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
118105246
NCBI-ProteinID:
XP_035008672
LinkDB
All DBs
Position
1:8856114..8867763
Genome browser
AA seq
782 aa
AA seq
DB search
MGIILLSLILRYWITSVEGSCSTGSAGTCDQCLQLSPHCAWCTQENFTDWFSVSERCDTL
DILVEKGCASSQLEFPVSEGQILLDRPLGKKTDSANSTQISPQKMALKLRAGSQVTFQVK
IQHTDDYPVDVYYLMDLSASMIDDLEMIKDLGSSLSKEMANLTSKFRMGFGSFVEKPVLP
FIKITEEELANPCREVGTTCLPAFGYKHVLSLTSSTDKFNEIIAKQRVSANIDVPEGGFD
AVMQVAVCGDKIGWRNDSMRLLVFVSDADSHFGMDSKMAGIVIPNDGQCHLDVNNEYSMS
TVQEYPSLGQLIDKVMENNILLIFAVTKEQTHNYKNYANLIPGATVGALATDSRNILELI
VTAYKELRSEIELEVYGDTEELQMSFTTICPNGTVLPDLKRCSNVKPGETVVFNVTVELP
GCLSGVRHFSLRAVGLQDSLEVELESLCSCDCRQPPEANSSQCTEGLGEFNCGVCVCQPG
FLGAQCECNEESVLLSNCLASNESEVCSSQGQCYCGQCVCHASSFGRIYGPYCECDNYSC
VRFRGELCGGHGVCDCGECHCESGWTGEYCNCSTSTEACMSEDGTVCSGRGKCKCGHCVC
SVPGASGDKCEKCLTCGDACSSARSCVECHLQDKDDAELCDQRCSVPKMSINTTGDYDKS
SSLPCTLMTENECWISFDVVGSETGTTAYNLQMYGCPEPPNIPMIILGVSLSIVCIGLIL
LAVWKVLVSVHDRKEVAKFEAEKSKANWQSGTNPLFRSSTSTFKNVTYKNTQREKILTVN
SY
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggggattattctgctgagcctgattctccgctactggatcaccagcgtggaaggatca
tgttcgactggcagcgctgggacttgtgaccaatgtctgcagctcagtcctcactgtgcc
tggtgcacacaggagaacttcacagactggttctcagtcagtgaaagatgtgacacactg
gatatcttggtagaaaagggatgtgccagcagccagctggagttccccgtctccgaaggt
caaatcctcctcgatcgcccgctcgggaagaagacagacagcgctaacagcacccagatc
tctccacagaagatggccctcaagctgcgagctggcagtcaggtgacgttccaggtcaag
attcaacacacagacgactatcccgtggacgtgtactatctgatggacctgtcagcgtcc
atgatcgatgatctggagatgatcaaagacttgggctcctctctgtctaaagagatggcc
aacctcaccagtaaatttcgcatgggcttcggttcttttgtggagaagcctgtgctgcct
ttcatcaagatcacagaggaggagctggccaacccctgcagggaagtgggcacaacctgc
ctgccagcgtttggctataaacacgtcttgtctctgacgagcagcaccgacaagttcaac
gagatcattgcaaagcagcgtgtgtctgcaaacattgatgtgccagagggtggctttgac
gctgtcatgcaagtggccgtttgtggggacaagataggctggaggaatgattccatgcgt
ttgctggtgttcgtcagtgatgccgactcacactttgggatggacagtaagatggccggc
atcgtgattcctaatgacggccagtgtcacctggatgtcaacaatgagtactccatgtcc
acagtgcaggagtatccgtccctcggacagctgattgataaagtcatggagaacaacatc
ctgctgatattcgctgtgacgaaggagcagacacacaactataagaactatgcaaatctc
atacctggcgccacagtcggagctctggcgacagattcgaggaacatcctggaactgatt
gtaacagcgtataaagaactgcgctccgagatcgaactagaggtctacggagacacagag
gagctgcagatgtccttcacaaccatttgccccaatggtactgtcctgcctgacctaaaa
cgctgctccaacgtcaaaccaggggagacggttgtgttcaatgtgactgtggagctcccg
ggatgcctgtcaggagtccggcacttctccctcagagcggtgggcctgcaggacagtttg
gaggtggaactggagtctctttgctcttgcgactgccggcagcctcctgaagcaaacagc
agccagtgcaccgagggcctgggggagttcaattgtggcgtgtgcgtgtgccagccgggg
ttcctgggagcacagtgcgagtgcaacgaggagagcgttttgttgagcaactgccttgcc
agcaatgagtcagaagtatgcagcagtcaagggcagtgctactgcggccagtgtgtgtgt
catgcatccagcttcggccgcatctacggaccttactgcgagtgtgacaactactcctgt
gttcgcttccggggagaactctgtggaggccacggagtgtgcgactgcggagagtgtcac
tgtgagagtggttggacgggggagtactgcaactgcagcaccagcactgaagcgtgcatg
tcggaggatggcactgtctgcagcggcagggggaaatgcaagtgtggccactgtgtctgc
tctgtacccggagcgtctggggacaagtgtgagaagtgcctgacatgtggagacgcctgt
agctctgcaaggagctgtgtggagtgtcacctccaagataaggacgatgctgagctttgt
gatcaaaggtgcagcgttcctaaaatgtccatcaacacaacaggagattatgacaagagc
tcctctttgccatgcacgttgatgacggagaatgagtgttggatctcttttgatgtggtg
ggaagtgagacaggtaccactgcctacaatctccagatgtacggttgcccggagcctccg
aacatccccatgatcatcctgggtgtctccctttccattgtgtgtatcggcctgatcctg
ctggctgtgtggaaggtgctggtgtcggtgcacgaccgtaaagaggtcgccaagtttgag
gctgagaagtcaaaagcaaattggcagtcggggaccaaccctttgttcagaagctcgacg
tccaccttcaaaaatgtaacttacaagaacacgcagagagaaaagattttaaccgtgaat
tcctactga
DBGET
integrated database retrieval system
