Hippoglossus stenolepis (Pacific halibut): 118105250
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Entry
118105250 CDS
T08308
Symbol
nedd4a
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4a isoform X1
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04120
Ubiquitin mediated proteolysis
hsp04144
Endocytosis
hsp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118105250 (nedd4a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118105250 (nedd4a)
09144 Cellular community - eukaryotes
04530 Tight junction
118105250 (nedd4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118105250 (nedd4a)
04121 Ubiquitin system [BR:
hsp04121
]
118105250 (nedd4a)
03029 Mitochondrial biogenesis [BR:
hsp03029
]
118105250 (nedd4a)
Enzymes [BR:
hsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
118105250 (nedd4a)
Membrane trafficking [BR:
hsp04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
118105250 (nedd4a)
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
HECT type E3
118105250 (nedd4a)
Mitochondrial biogenesis [BR:
hsp03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
118105250 (nedd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
Motif
Other DBs
NCBI-GeneID:
118105250
NCBI-ProteinID:
XP_035008717
LinkDB
All DBs
Position
1:15465025..15492929
Genome browser
AA seq
1278 aa
AA seq
DB search
MARRLRLHFASRRSNTDPLSESLSSHGEESGDSVSARSPAESLAHSSVRLKVTPLSPDYA
NLQRYSSVFIPRVNVGGCNKKSILQISLQPCGKFSGEVDGSTEDGEQGVEGGAGTASDGG
SCSSSSMTSDAGYCSSNSIFEPEAPEKHRTTQERSLPRCKSKVPLRRCSSLVIFPESPCS
TPPASPVSPVALPALLQALGSHQSSLQTSASEFSQDDEDVSCKGSTTTAVIGHRLPKGSF
SGDFRDTKHMVQFNIPLQDEPKCKMEDRSKVMELSSTLDRSNRHSSSVLLHFAHQRPMIS
RKGATSATTVNVEYPGALNPAAHPKREHEPHRKLYRSTSACLFSSTKSSGKNQKVCSYGK
SQEKAEENQCHRAIQRSFSLEVPYANTGISCHVSNPKLSSPCSPHVHIHLTPCCPAKLPN
SATDVNTSLEVNNTPKSPGQNTKTRDDFLGQVDVPLNQIPTENPNTERPYTFKDFLLHPR
SHKSRVKGHLRLKMTYLPKNPGSEGETADQTEEPDPGWELLEAQDMSGPRQSQLLPPLPP
GWEERQDNLGRIYFVNHESRTTQWYRPTIQDSDLEMHRRQNTDIDVEHALSTRRQISDHD
ENATRESPESWEIITEDESTMYHSNNQLASPPPQIPAEFHSFCGELRNLQVSGATAGEQR
TSHTDHASNSSHSSFRRSSQSSTGEEHPVSPVLIPTSSGLPPGWEEKRDSKGRRYFVNHN
SRATTWTRPVIQKTSDAAAATAAATAATATATATAATAAVAAAAQSGSSLPQSPPPPLPT
TSPEASPQHTPSPEATYESGFLPGGWEVRSAPNGRPFFIDHTTKTTTWEDPRLKIPVHMR
KRPSLDPADLGPLAPGWEERVHSDGRIFYIDHNTKTTQWDDPRLQNSAITGPAVPYSRDY
KQKYDYFRKKLKKPADIPNRFEMKLRRSAVLEDSYRRILSVKRADLLKARLWLEFEGEKG
LDYGGLSREWFFLMSKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHFSYFKFIGRVA
GMAVYHGKLLDAFFIRPFYKMMLQKPITLQDMESVDSEYFNSLMWILENDPTELDLSFTI
DEELFGQTHQHELKPGGSEIVITNDNKKEYIDLVMQWRFVNRIQKQMTAFKEGFFELIPQ
DLIKIFDENELELLMCGLGDVDVNDWRENTKYKNGYCSNFVVIQWFWKTVLLMDAEKRIR
LLQFVTGTSRVPMNGFAELYGSNGPQLFTIEQWGTRDKLPRAHTCFNRLDLPPYESFEEL
REKLHIAIENAYGFDGVD
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtcggctccgcttgcattttgcgtcaaggagaagcaacacggaccctctgtca
gaaagcctcagcagccatggtgaggagagtggagacagtgtgtcagctcgcagccccgca
gagagtctggcgcacagttcagtccgcttgaaggtgactcctctgtcaccagactatgct
aatctacagcggtactcttcagtgttcatacccagggttaacgttggaggatgtaataag
aagagtattctgcagatctccctgcagccctgtggtaagttcagtggagaagtggatggc
agtacagaggatggagagcagggagttgaaggaggagcaggtactgcctctgatggaggc
tcgtgcagcagcagcagcatgactagcgatgctgggtactgtagcagcaacagcatcttt
gagccagaggctccagaaaagcacaggaccacccaggagaggagtctacctcgctgcaag
tccaaggtcccactgagacggtgctcctccttggttatatttccagagagcccctgtagt
accccacctgcctccccagtaagtcctgtggctctacctgctcttctacaagcactgggt
tctcaccagtcatctcttcagacatctgccagtgaattctcacaagatgatgaggatgtg
agctgcaaagggtccaccaccacggcagtaattggccatcgtctcccaaaaggaagcttt
tccggcgacttcagggacacaaaacacatggtgcaatttaatattcctttacaggatgaa
ccaaaatgcaaaatggaggacaggagtaaagtaatggaactgtcatcaaccctagacaga
tcgaatcgtcactctagcagcgtgctactacactttgcccaccagagaccaatgatatcc
aggaaaggagctacaagcgcaactacagttaatgtggaatatcctggggctcttaatcca
gccgcacaccctaagcgcgaacatgaacctcacagaaaactgtatcgtagtacctctgct
tgtttgttctcctcaactaaatcatcagggaaaaaccagaaggtctgttcgtatggaaaa
agccaggaaaaggctgaggaaaaccaatgtcatcgtgccatacaaaggagcttttccctg
gaggtgccttacgctaatactggaatttcatgtcatgtttcgaatccaaaactcagtagc
ccctgttccccacatgtgcacatacatttgactccttgttgtcctgctaagttaccaaac
tctgctactgatgtaaacacaagccttgaagtgaataatacgccaaagagcccaggtcaa
aacaccaagacgcgtgatgactttctgggacaggtggatgtccccttgaatcagataccg
acagaaaatcctaacacagaaaggccatacacattcaaggattttttgcttcatccacga
agccacaagtccagagttaaaggtcatctacgtctcaaaatgacctatctgccaaaaaac
cctggttcagagggggaaacagccgatcagactgaggaacccgatcctggttgggagctg
ctcgaggctcaggacatgtcaggtcccagacaaagccagctgctgcctcctctgccccct
ggctgggaggagcggcaagacaatctgggaagaatctactttgtcaaccacgagagcaga
accacacagtggtatcgacccacaatacaggacagtgatttggagatgcacagaagacag
aacactgatatagatgtggagcatgcgttaagtacacgcagacagatctcagaccatgat
gaaaatgccacacgagagtcccccgagagctgggagatcattacagaggacgagtccacc
atgtaccacagcaacaaccagctcgcatcacctccaccccagatacctgcggagttccac
tcgttttgtggcgagctgagaaacttgcaagtttcaggggccacagctggcgagcagcgc
acctcccacacggatcatgctagtaattcaagccattccagttttagaagaagctcccag
agttcaactggagaggaacatcctgttagtcctgtgctgattccaacctcatctggcctg
cctccagggtgggaggagaagagggacagtaaaggaagacgctattttgtcaaccacaac
agtcgagctacaacttggacacgacctgtcattcagaaaacttcagacgcagcagcagca
acagcagcagcaacagcagcaacagcaacagcaacagcaacagcagcaacagcagcagta
gcagcagcagcacagagtggttcaagtttaccccaaagtccgccaccgccactgcccact
acatcccctgaggcgtctcctcagcacacaccaagcccagaggccacatatgaatctgga
ttcttgccgggtggttgggaagttcgcagtgctcccaatggaagaccgtttttcatcgac
cacaccacaaagacgactacctgggaagaccccagactaaagattcctgtacacatgagg
aagagaccctcacttgaccctgctgatcttggccctctggcgcctggttgggaggaaaga
gttcacagtgatgggaggatattctacatagatcacaacaccaagaccacacaatgggat
gatcccagattacagaactcagctataactggaccagctgtgccttattccagagattat
aaacagaagtatgactacttccggaagaagctgaagaaaccagctgatatcccaaatcgc
tttgagatgaagctgagacgaagcgctgtgctggaggactcataccgacgcatcctctca
gtaaagagggcagatctgctgaaggcacgactgtggttggagtttgagggagagaaagga
ctggactatggcggcttgtccagggagtggttcttcctcatgtccaaggagatgttcaac
ccgtactacggactgttcgagtattctgccacggacaactacacactgcagattaaccct
aactcaggtttgtgtaatgaggaccacttttcctacttcaagttcatcggccgtgtggca
ggcatggctgtgtatcatggaaaactgctggatgctttcttcattcggcctttctacaag
atgatgctgcagaagccgatcaccctccaggacatggagtctgtggacagtgaatatttc
aactccttgatgtggattttggagaatgacccaacagagttggatttgagtttcaccatc
gatgaagagctgttcggacagactcatcaacatgaactgaagccaggcggcagtgagatt
gtcatcactaatgacaacaagaaggaatacattgatctggtgatgcagtggaggtttgtg
aacaggattcagaagcagatgactgcattcaaagagggattctttgagctgataccacaa
gatctgatcaagatctttgatgagaatgagctcgagctgctcatgtgtggtctcggagac
gtggacgtgaacgactggagagagaacaccaagtacaagaatggctattgctccaacttc
gtagttatccagtggttttggaaaacagtgctactgatggatgcagagaagcgaatccgg
ctcttacagtttgtgacgggaacatccagggtccctatgaatggctttgctgaactctat
gggtctaatggaccacagctgtttaccattgagcagtggggaacacgcgataaactcccc
cgagcccacacatgcttcaaccgtctggaccttcctccttatgagtcatttgaggaactg
agggagaaacttcacatcgccattgagaatgcttatggtttcgatggggtggattaa
DBGET
integrated database retrieval system
