Hippoglossus stenolepis (Pacific halibut): 118105291
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Entry
118105291 CDS
T08308
Symbol
rbbp5
Name
(RefSeq) retinoblastoma-binding protein 5 isoform X1
KO
K14961
COMPASS component SWD1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsp03036
]
118105291 (rbbp5)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
118105291 (rbbp5)
COMPASS/SET1 complex (yeast)
118105291 (rbbp5)
MLL-HCF complex
118105291 (rbbp5)
MLL3/MLL4 complex
118105291 (rbbp5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
Beta-prop_EML
WDR55
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_LRRK2
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_WDR75_1st
WDR54
Beta-prop_WDR11_1st
Beta-prop_NUP159_NUP214
Beta-prop_TEP1_C
MspA
BUD22
Motif
Other DBs
NCBI-GeneID:
118105291
NCBI-ProteinID:
XP_035008755
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Position
3:5198505..5206323
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AA seq
559 aa
AA seq
DB search
MNLELLESFGQNYPEEADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAK
IISAHIHPVCSLCWSRDGHKLVSASTDNIVSQWDVLTGDCDQRFRFPSPILKLQCHPRDM
DKVLVCPMKSAPVLLTLSDSKHVVLPVDDDSDLNVVAAFDRRGEFIYTGNAKGKILVLNT
TNQELVASFRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRVYDGREILTCGRDGEPE
PMQKLQDLVNRTPWKRCCFSGDGEYIVAGSARQHALYIWEKSIGNLVKILHGTRGELLLD
VAWHPVRPIIASISSGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDIEDEDKS
EPEQTGADAAEDEEVDVTTVDPIVAFCSSDEELEDYKALLYLPIAPEVEDPEENPFGPPP
DSSVQSSAPEEALAAGDKKQRQPSSEGPAKKKARTTTIELQGVPSDEVHPLLGVKGDGKS
KKKTAGRPKGSKGKDKDFTFRPKPYRGERPSFPVEALGSSGPGVGVGGGIGMKGRAEGGL
APGTLVSQSYKQHDIGGMD
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgaatctggaacttctcgaatcgtttgggcagaactacccagaggaggcagatggcact
ctggactgcatcagtatggccctcacctgcaccttcaaccggtggggcaccctgctggcg
gtgggctgcaatgatggccgcattgtcatctgggactttctcacgaggggaatcgccaaa
attatcagtgcacatattcacccagtctgctctttatgctggagtcgagacggacacaag
ctggtgagcgcctccacagacaacatcgtctcacagtgggacgtcctgactggagactgt
gaccagagattccgtttcccctcgcccatcctgaaactgcagtgccaccccagagacatg
gacaaggtgctggtgtgtcccatgaagtcagccccggtcctactgactctgtcagactcc
aaacacgttgtcctgcctgtggatgatgactcagacctgaatgtggtggccgcctttgac
agacggggcgagttcatctacacaggcaacgccaaaggaaagattctcgtgttgaacaca
accaatcaggagctggtggcgtctttcagagtgaccactggcaccagtaacacgacggcc
atcaaatccatcgaatttgcaaggaagggcagttgcttcctcataaacacagcagacagg
atcatcagagtgtacgacggcagggaaatactgacgtgtggacgagacggtgaacctgag
ccaatgcaaaaactacaggatctggtcaacaggacgccgtggaagcgctgctgtttctcc
ggggatggtgagtacattgtggccggttcagccaggcagcacgccctctacatctgggag
aagagcattggcaacctggtgaagatcctgcatggaaccagaggagagctgctgctggat
gtcgcttggcatcctgtacgtcccattatcgcctccatctctagtggagtggtgtccatc
tgggctcagaatcaagtggaaaactggagcgcttttgcgcccgacttcaaagaactggat
gagaacgtggagtacgaggagcgagagtctgagttcgacatcgaggatgaagacaagagt
gaaccagagcagacaggtgcagacgctgcagaggatgaagaggtggatgtcaccaccgtt
gaccccatagttgctttttgcagcagtgatgaggagctggaggactacaaggctctgctg
tacctgcccatcgcccctgaagtcgaggatcctgaagaaaaccccttcggccccccaccg
gactcctcggtccagtcttctgctccagaggaggcgttggctgccggcgacaagaagcag
cggcagccttcatctgaaggcccggccaaaaagaaagcccgcaccaccaccatcgaactg
cagggggtgcccagtgacgaggtgcaccccctgctgggcgtgaaaggggatggcaagtcc
aagaagaagacagcgggtcggcccaaaggctccaaaggtaaagacaaagacttcaccttc
agacccaagccctacaggggcgaacggccctccttccccgtggaagccttgggcagctct
ggcccgggagttggagttggaggaggaatagggatgaagggcagggcagaggggggcctg
gccccagggactctggtctcacagtcgtacaaacagcacgacatcggagggatggactga
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