Hippoglossus stenolepis (Pacific halibut): 118105313
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Entry
118105313 CDS
T08308
Symbol
cdh15
Name
(RefSeq) cadherin-15
KO
K06809
cadherin 15, M-cadherin
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
118105313 (cdh15)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hsp04515
]
118105313 (cdh15)
Cell adhesion molecules [BR:
hsp04515
]
Cadherins
Major cadherins
118105313 (cdh15)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Big_9
He_PIG
Motif
Other DBs
NCBI-GeneID:
118105313
NCBI-ProteinID:
XP_035008825
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All DBs
Position
1:11541725..11557014
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AA seq
802 aa
AA seq
DB search
MGATTLMVCLLGALLGQAWSAAEHHRNEEELPPQALYPWRNQGRGLVRVRRDWIIPPIRV
LENSKQVPENLVQIKSDKIFTGEVIYKLEGPGVDQDPKNLFEIDDITGMIRSKRPLDRER
YRSFTLKAFALSPSGQRLENPTTIEIVVLDQNDNRPFFTQSQFVGAVSEFSVPGTSVMTV
SATDADDPMTENAFLSYSIIDQESDPANAFNKTMFGINNETGAIYTRDVGLDREVVKSFR
LKVQVADMGGMGLTGVGVAVIHVSDINNHAPQFSPVSYSMTAVENRQDYEIGRVNVTDRD
DRGTGNWEAKYFISNDPDGNFAIATDPVTNQGVLSVVQPLDFEAHSEYVLSVVVENVNSL
SNKAPNLPASSAMVVVSVTNENEAPHFREDPIQIVVPESVVPGTLLKSNIAFDPDNSELR
YEIVRDPEKWLDINRDTGDIRAKRTFNMRSPNVKNRIYTAVVKVTDGGGVSTTATVVITL
KETNDFPPQLFPLSGSVCRGAHRTRSGLMVTAVDEDLPPHAAPFTFEMSNYLSVNWTVVQ
VNDTHAVLQPLVELETGEYAVTVLVSDSGSPTLSAYAQVNITVCPCDSFGDCKSEAGAVS
GSSVGISFIALIIIMACVALLLLLLLLAVAATTCGRRHHIKKGGGLLVGESEDDIRDNVI
NYDEQGGGEEDENAFNIDMLWTPHDAPSTPGSYCPVPRVPRGKQPLRMDAPHNLPSPIYP
RRPPADPTDIEDYINDGLEAADNDPNVPPYDTALIYDYEGEGSLAGSLSSIASGSSDGDQ
DYDYLNNWGPRFQKLANMYDPR
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgggggcgacgacgttgatggtgtgtctgctgggtgccctgcttggtcaggcttggagc
gccgcagaacatcatcgcaatgaggaagagcttcctcctcaggccctttacccctggaga
aatcaaggaaggggattggtcagggtgaggagagactggatcatccctccaatcagagtg
ttggagaatagcaagcaggttcctgaaaaccttgtccagatcaaatcggacaaaatcttt
acaggtgaggtgatctacaagttggagggaccgggggtggaccaggaccccaagaatctg
tttgagatcgacgatataacggggatgatcaggagcaagcggcccctggaccgagagaga
tacagaagcttcacgctaaaagcatttgcgctgtcgcccagtggacagagactagagaat
cccaccaccatagagatagtggtgctggatcagaacgacaacagaccctttttcacccag
agccagtttgtcggtgctgtctctgagttctctgtcccaggcacatcagtgatgacagtc
tcagccactgatgcagacgacccaatgacagaaaacgcctttctgagctactcgatcatc
gaccaggagagtgatcctgccaacgccttcaacaagaccatgtttggtattaacaacgag
acgggagcgatctacacgagagacgtcggcctggacagagaggtggtgaaaagtttcaga
ttgaaagtgcaggttgctgacatggggggcatgggactaacaggtgtaggtgtggcggtc
atacatgtatctgacatcaacaaccatgctccgcagtttagccctgtctcgtacagtatg
acagcagtggagaacaggcaggactacgagatcggccgggtgaatgtgacagacagagac
gatcggggaacaggaaactgggaggccaaatatttcatttccaatgatcctgatggaaac
ttcgccatcgctacagaccccgtcaccaaccagggcgtcctgtcagtggttcagcctctg
gattttgaagcacatagtgagtatgtgctgagtgtagtggtggaaaacgtcaacagtctg
agcaacaaggctcccaacctcccagcgagctctgctatggtggtggtcagtgttacgaat
gagaacgaagctccacatttccgggaggacccgatacagatcgtggtccctgagtctgtg
gttcccgggacactcctgaagagcaacatcgcctttgaccctgataattctgagctgaga
tatgagatcgtcagggatccggagaaatggctggacatcaacagagatacaggagatatt
agagccaagagaacctttaacatgagatctccaaatgttaagaaccgtatctacactgct
gtggtgaaggtgacagacggtggtggtgtgtcgaccacagccacagtcgtcatcacactg
aaggagaccaatgacttcccccctcagctctttcctctgagcggctctgtgtgcaggggt
gcacaccggacacgctctggtctgatggtgacggcggtggatgaggatcttcctccgcac
gctgcacccttcacctttgaaatgtccaattatctgtcagtcaactggactgttgttcaa
gtcaatgatactcatgctgtgcttcagcccctggtggagctggagacaggagagtatgca
gtcacggtgctggtgtcagactccggcagcccaactctgagcgcctacgctcaggtcaac
atcactgtgtgtccctgcgactccttcggagactgtaagtctgaggcaggggctgtctca
ggctccagtgtgggaatcagcttcatcgctctcattatcatcatggcctgtgttgcactc
ctactgttgctgctcctcctggccgtggcagcgaccacctgcgggagacgccaccacatc
aagaaaggaggcggtcttcttgtcggggaatcggaggatgacatccgggacaacgtcatc
aactatgacgagcagggagggggtgaggaggacgagaacgcctttaacatcgacatgctg
tggactccccatgatgcaccttcaaccccggggtcctactgcccggtgccccgtgttcct
cgaggcaagcagcccctcaggatggacgccccacacaacctgccctcgcccatctaccca
aggagacctcctgcagatcccactgacatcgaggattacatcaatgacggcctagaggca
gcagacaacgatcctaacgtgcctccatatgacacagctctgatctacgactatgaggga
gagggatccctggcaggcagcctcagctccatcgcttcaggcagctcggacggagaccaa
gactacgactacctcaacaactggggaccacgctttcagaaactggccaacatgtatgac
ccacgttaa
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