KEGG   Hippoglossus stenolepis (Pacific halibut): 118105434
Entry
118105434         CDS       T08308                                 
Symbol
wdr82
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
hsp  Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:hsp00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    118105434 (wdr82)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsp03019]
    118105434 (wdr82)
   03036 Chromosome and associated proteins [BR:hsp03036]
    118105434 (wdr82)
Messenger RNA biogenesis [BR:hsp03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     118105434 (wdr82)
Chromosome and associated proteins [BR:hsp03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     118105434 (wdr82)
    COMPASS/SET1 complex (yeast)
     118105434 (wdr82)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40_Prp19 Beta-prop_IFT122_1st Beta-prop_WDR3_1st WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 WDR55 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_NOL10_N Beta-prop_TEP1_C Beta-prop_EML DSE1_N WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_VPS8 Beta-prop_SPT8 Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_WDR19_1st WD40_RFWD3 NBCH_WD40 Beta-prop_IFT140_1st PAC11 Beta-prop_NUP159_NUP214 WD_LRWD1 Beta-prop_ACSF4 MinC_C Beta-prop_NWD2_C Beta-prop_DCAF4 Ubiquitin_UBP8
Other DBs
NCBI-GeneID: 118105434
NCBI-ProteinID: XP_035009084
LinkDB
Position
3:12691054..12695925
AA seq 313 aa
MKLTDNVLRSFRVAKVFRENSEKINCFDFSSNGETIISSSDDDSLVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHNKRVTSLSMSPVDD
TFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGINSEMVKLYDLRSFD
KGPFATFKLQYDRTCEWTGLKFSNDGKLILLSTNGAALRVLDAFKGAVVHSFGGYNNSKC
VTLEASFTPDSQFVMIGSEDGKIHVWNAESGMKVALLDGKHTGPVTCLQFNPKFMTVASA
CSNMAFWLPTIDD
NT seq 942 nt   +upstreamnt  +downstreamnt
atgaagctgacggacaatgtgctgcggagcttcagggtcgctaaggtgttccgggaaaac
tccgagaaaatcaactgcttcgacttcagctcgaacggagaaacgatcatttccagcagc
gacgacgactccctggtcctgtacgactgtcaggagggaaaacccaagaggactctctac
agtaagaagtatggagtggatctgatcaggtacacgcacgctgccaacactgtggtctac
agttccaacaaaatcgatgatactatccgatacctgtcccttcatgacaacaaatacatc
cgctactttccggggcataacaaaagagtgacgtctctctccatgtctcccgtggacgat
acgtttatttctggttcattagataaaactattcgactttgggatctgcggtcgcccaac
tgccagggtctgatgcacctgcaggggaaaccagtttgctcctttgacccggagggtcta
atttttgctgcaggaataaactcggagatggttaaactttatgacctgcgctcatttgac
aagggtccctttgcaaccttcaagcttcagtacgatcggacgtgcgagtggacaggactc
aaatttagcaacgatggaaaactaattcttctttcgactaacggcgccgctcttcgggtc
ttagatgcttttaagggcgctgtggtgcactcgtttgggggctacaacaacagtaaatgt
gtaacgctagaggcatcgttcactcctgactctcagttcgttatgatcgggtcggaggac
ggaaagatccacgtgtggaacgcagagagcggtatgaaggtggctctattagatgggaag
cacacaggaccagttacgtgcttacagttcaaccccaagttcatgacagttgcaagtgcc
tgttccaacatggcgttctggctgccgacaatagacgactga

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