Hippoglossus stenolepis (Pacific halibut): 118105515
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Entry
118105515 CDS
T08308
Symbol
cntn4
Name
(RefSeq) contactin-4
KO
K06762
contactin 4
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hsp04515
]
118105515 (cntn4)
Cell adhesion molecules [BR:
hsp04515
]
Immunoglobulin superfamily
Contactins
118105515 (cntn4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
V-set_CD47
Sp38
Ig_C17orf99
Ig_5
Tissue_fac
Pur_ac_phosph_N
Ig_4
C2-set_2
Interfer-bind
fn3_4
Motif
Other DBs
NCBI-GeneID:
118105515
NCBI-ProteinID:
XP_035009270
LinkDB
All DBs
Position
3:25987071..26139710
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AA seq
1029 aa
AA seq
DB search
MMLLWKLLVLQSLMGCLAETSVLQSPAFSKQPGSIVYPVETLERNREVVFSCEAQGSPPP
MYRWKLNGTEISPKSGSHYSLSGGNLRINRLNKDQDAGTYQCLASNSFGTIVSREASLTF
AYLEDFKTHRRSSVSVREGQGVVLLCGPPPHSGDLIFSWIFNEYPTFVKQDTRRFISQET
GNLYIAKVEPSDVGNYTCVVTNSVTKTRVQGPPTPLVLRSDGVMGEYEPKIEVQFPEVVH
VSKGSTVKLECFALGNPVPSINWRRVDGVPFPRKVDMRKASGVLEIPYFQQEDAGTYECV
AENSRGMNTVKGKLSFYAPPHLIEKPEDVQKLIDDSLVWECKATGKPKPSYRWMKNGENL
DSAEERIQVANGALTISRLTLSDTGMYQCVAGNKHGEVFSNTELRVIAVAPDFSHNQLRS
QTLVKVGGDVLIECRPKMSPWGGISWRKGSEPLRDNNRVSILENGNLRVWNATKSDAGLY
TCVARNQFGVASSTGSVTVKEPTIITTQPSTLDITVGESVVLPCQVNHDPSLELKFTWFF
NEQLIHFGNHGGFFEKVGGQHSAGDIMIRNIQLRHAGKYTCAVQTKVDSISIAVDLVVRG
PPGPPTSIQVEEISDTTASLSWRPGPDNHSPITAYTIQARTPFSLGWQAVTTVPEVVGGN
RLTATVIDLSPWVEYEFRVLASNTIGTGEPSKPSKQARTKGTSPKVTSANVSGGGGSRSE
LVITWEPVPEELQNGPGFGYVVAFRPHGATGWMQAAVPSAEASKYVFKNESIQPFSPFHV
KVGVYNNEGEGPFGPVTTIYSAEEEPGRAPTRVRAKSLSASEIEVTWKALPWNASKKRVL
GYELRYWNRSEREDTASVQRTVGNQTSTIIHGVKGSTTYYISVRAYNTAGTGPPSAAVNV
TTKKPPPSQPPVKVMWNTSNSKIILNWEQVKALENESEVTGYKVLYKKNRHSRPSVMETN
TTSVELALPTDEDYIIQIRPFGEGGEGSSSRQFTIPRIPGPNAVGSASKVSTLSALSTIA
LSFTARTSL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgctatggaaactgctggtgctgcagtcacttatggggtgccttgcagagacc
agtgtcctgcagagtcccgccttcagcaagcagcccggcagcatcgtgtatcctgtggaa
acgctggagaggaacagggaggtggtgttcagctgcgaagcccagggaagcccacctccc
atgtaccggtggaaactgaacggtacagaaatcagtcccaaatctggatctcactacagc
ctctccggaggcaacctcagaatcaaccgtctcaacaaggaccaggacgctggaacgtat
cagtgcctcgcctccaactcctttgggaccatcgtgagccgagaggccagtctcaccttt
gcatacttggaagacttcaagacccacagaaggagctctgtatcggtgcgtgaaggtcaa
ggagtggttctgctgtgtggccctccaccgcactccggagatctgatattttcctggatc
ttcaatgaatacccaacatttgtgaagcaggacactcgtcgcttcatctcacaggagacg
gggaatctgtacatcgccaaggtggagccctcagatgtcggaaactacacctgtgtggtg
accaactccgtcacaaagaccagagtccagggtccacccactcctctggtgctccgcagt
gatggtgtgatgggtgaatatgagccaaagattgaagttcagtttccagaggtggttcac
gtctccaaaggatccaccgtcaagctggaatgcttcgctctgggaaacccagttccctct
ataaactggaggagagtggacggcgtaccgttccccaggaaggtggacatgaggaaagcc
agcggtgtcctggagatcccgtacttccagcaggaggatgcgggcacttacgagtgtgtg
gccgagaactccagaggaatgaacacagtgaaaggaaagctctctttctacgccccccct
catctcattgaaaaacctgaagatgtgcagaagctcattgatgactcgctggtgtgggag
tgtaaagccacagggaagccgaagccttcttacaggtggatgaaaaatggagagaacctg
gattctgctgaggagcgcatacaggtcgccaatggggcattgacaatcagccgcctcacc
ctgtccgacacggggatgtaccagtgtgtggctgggaacaagcacggcgaggtcttctcc
aacacagagctacgagttatagccgttgccccagatttctctcacaatcaactgaggagc
cagacgctggtgaaggtaggaggagatgtgctcatcgagtgcaggccgaagatgtctcct
tggggtgggatctcttggcggaagggcagcgaaccactccgagacaataacagggtctcc
attctggaaaacgggaaccttcgggtatggaacgcaaccaaatccgatgcaggcctctac
acttgtgtggcgagaaaccagtttggcgtggcgagcagcacagggagcgtcacagttaaa
gagccgactatcatcaccacccagccgtccacgctggacatcaccgtgggggagagcgtg
gtcctgccctgtcaagtgaatcacgacccgtctctggagctcaagttcacctggttcttc
aacgagcagctcatccactttgggaaccatggtggattttttgaaaaagtgggaggtcag
cattcagcaggagacattatgattcggaacatccagctgaggcatgctgggaagtacacg
tgcgccgtgcaaacgaaggtggacagtatttccatcgccgttgacttggtcgtcagaggt
cccccggggcctcccaccagcatccaagtagaagaaatcagcgataccacagcttctctg
tcctggaggcctggtcctgataatcacagtccaattacggcatatacaatccaggccagg
acaccattttccctcgggtggcaggctgtcaccacagttcctgaggtggtggggggcaac
cggctgacagctacagtaatagacctgagcccttgggtggagtatgagtttcgagttctg
gcaagcaacaccatcgggaccggcgagcccagcaagccatccaaacaagcaaggacgaag
gggacctctccgaaggtcacatcggctaatgtgagcggaggcggtggcagtcgctccgaa
ttagtcatcacatgggagcctgttccagaggagctgcagaacggcccagggtttggctat
gttgttgctttccgaccccacggtgcaacgggatggatgcaggcggccgtgccgtcggcc
gaggcgtccaaatacgtctttaaaaacgagagcatccagcccttctcgcctttccatgtt
aaggtcggggtttacaacaacgagggggaagggccctttggacccgttaccactatctac
tctgctgaagaagagcctggccgggcgcccaccagggttcgtgccaagagcctctccgcg
tccgaaattgaagtaacgtggaaagctctgccctggaacgccagcaagaagagagtgctg
ggctacgagctgaggtactggaatagaagtgaaagggaggacacggccagcgtgcaaagg
acggtgggaaatcaaacctctactattatccacggggtgaaaggcagcaccacatattac
atctcagtgagggcgtataacactgctggaacagggcctcccagcgccgctgtcaacgtt
accactaaaaaaccaccacccagtcagccaccagttaaagtcatgtggaacacatcaaac
tccaagattatattgaactgggagcaggtcaaagccctggagaatgagtcagaggtcact
ggttacaaagtgctctacaagaagaaccgacacagccggcccagtgtcatggaaaccaat
accacgtccgtggagctcgccctgcccactgatgaggattatatcatccagataagacca
tttggagagggaggggaaggcagcagtagcaggcagttcaccatcccaaggataccaggc
cccaacgcagtcggctcagcgtccaaggtctccactctgtcagcgctcagtacaatagcg
ctgtctttcacagctcggacatctttatga
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