Hippoglossus stenolepis (Pacific halibut): 118105519
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Entry
118105519 CDS
T08308
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2 isoform X1
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04010
MAPK signaling pathway
hsp04260
Cardiac muscle contraction
hsp04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118105519
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
118105519
04261 Adrenergic signaling in cardiomyocytes
118105519
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsp04040
]
118105519
Ion channels [BR:
hsp04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
118105519
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
VWA_CoxE
MCP-like_PDC_1
dCache_2
Motif
Other DBs
NCBI-GeneID:
118105519
NCBI-ProteinID:
XP_035009277
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Position
3:complement(14294039..14328688)
Genome browser
AA seq
1098 aa
AA seq
DB search
MAIGTRCCSIACLVSVHILLAGFSASWPGAEALTFPQQYTIMHWARRVEQEIDRVFQQIT
GAQQLKGIYNEERRRFSLVKNQPRKIVEKVASDIEKLLAKKRKALDRLAREAERLQREHP
WQDGIKELDMAYYDSKAELDYYSMDGEGEVENPSHIKLEFVYDPNFKNNVNYSYTAVQIP
TDIYKGAPVILNELNWTQALEKVFMENSREDPSLLWQAFGSATGVTRYYPATPWKAPDKI
DLYDVRRRPWYIQGASSPKDMVILVDVSGSVSGLTLKLIKASVMEMLDTLSDDDYVNVAR
FNEKAEAVVPCFKHLVQANVRNKKIFKDAVQQMQAKGTTDYKSGFHFAFNQLLNKTNVPR
ANCNKIIMLFTDGGEDRAQDVFMQYNWPNKTVRVFTFSVGQHNYDVTPLQWIACTNKGYY
FEIRSICAIRINTQEYLDVLGRPMVLAGSEAKQVQWTNVYQDALGLGMVVTGTLPVFNLT
MDGNSQQNQLILGVMGVDVHLDEIKRLTPRYNLGANGYIFAIDPNGYLLLHPNLKPKLVN
LPEPVTLDFLDAEVEDSNKEEIRRQMIDGRPGEMQVKTLIKSIDEQYIDDVFRSYTWTPI
NGTDYSLGLVLPTYNEYYIQADLSDVMLQLQYMQSLLPSSFELSGHVFLAPREYCKRLHI
SDNNTQFLQNFLSLMLDMSPESDECDQGLIHNLILDSRIIGQLASRVWKNKDLNSYGFLA
VFASTDGGITRVFPNIAAEMWEEDPEPFNSNYYRRSLDNRGYMFRAPPRSSVDDPLGAEN
STVGILVSSAVEVNLGGKLLKPAVVGVKLDLEAWVDKFKILASNVSDSRQGSHKCGPSRS
CEMDCEVNTDDLLCYLLDDGGFLVMSNQRDHWKKIGLFFGDVDPYLMHALYNNSIFSRRQ
SFHYQSACEPVSSSHTGAAPRGIFVPSIADMLSLAWWTSTVAWSVLQQLLYGLAYNSWLY
QDNILTEGFETRESSCVTIQSQFYFTNTTNSYNVLQDCGNCSRLFHAKRIENTNLLFVVA
ETLPCSSCEIERLTQVRTEFQEENPCEVLSNARYRKGPVSCFDYSALENTSECGRGHSLQ
SSIGVLLFIQLLLPLFHL
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atggcgataggcacaaggtgttgcagcatcgcctgcttggtatctgtccacatcctcctg
gcgggattcagcgcatcgtggcctggagcggaggctctcacgttcccacagcagtacacg
ataatgcactgggccaggcgcgtggagcaggagattgacagagtctttcaacaaatcacc
ggagctcagcagttgaaagggatatacaatgaagaaagacgacgattcagtctggtgaag
aatcagccgcggaagattgtggagaaggtggcctcggacattgagaagctcctggctaag
aagcgcaaagcacttgataggttggccagggaagcagagcgactccagcgagagcatccc
tggcaggatggaatcaaggagctggatatggcttactacgattccaaggctgagctggat
tattattcgatggatggagaaggagaggtggaaaacccctcccacatcaagctggagttt
gtctatgatcccaacttcaaaaacaatgtcaactattcctacacggctgttcagatcccc
acagatatttataaaggagctccagtcattctgaatgagttgaactggacgcaggcgctg
gagaaagtcttcatggagaacagtcgggaggatccgtcgttgctgtggcaggcgtttggg
agcgcgacgggagtcacacgctactatccagcaacaccttggaaagcccctgataagatc
gacctgtacgatgtcaggaggaggccctggtacatccagggagcctcatccccaaaagat
atggtcattcttgttgatgtgagcggcagtgtcagtggactcacgctcaaactgatcaaa
gcgtcagtgatggaaatgctggacactttgtctgatgatgactatgtcaacgtagccagg
ttcaacgagaaggccgaggctgtggttccttgtttcaaacatctagtccaggctaacgtg
cgcaacaaaaagatcttcaaggacgcggtgcagcagatgcaggcgaaaggcaccactgac
tacaagtctggatttcattttgccttcaaccagctgttaaacaagacaaatgtccccagg
gctaactgcaataaaataatcatgctgtttactgatggaggagaagacagagctcaggac
gtcttcatgcaatacaactggcccaacaaaacagttcgagtattcaccttttctgtgggt
cagcacaactatgatgtcacacccttacaatggattgcatgtaccaataaaggctactat
tttgagatccgttccatctgtgctataaggattaacacccaggagtacctggacgtgctg
ggacgccccatggttctggcaggcagcgaagccaagcaggtccagtggaccaatgtgtat
caggatgcattgggtcttggcatggtagtgaccgggactttgcctgtatttaatctcacc
atggatggaaactcacagcagaatcagctgatattaggtgtcatgggagttgacgtgcat
cttgacgagataaagcgactgacaccacggtacaatcttggagccaatggatacatattt
gccattgatccaaatggatatcttctcctacatcctaatctcaagccaaagctcgtgaac
ctccctgaacctgtgacgctggacttcctggatgcagaggtggaggacagcaataaagag
gagatccgcagacaaatgattgatggaagaccaggtgaaatgcaggtcaaaacgcttatc
aagtccattgacgagcaatacattgatgatgtgttcaggagttacacctggactcctatc
aacggcacagattacagtctgggtttggtactacccacctacaacgagtattacatccag
gcggacctgagtgatgtgatgctgcagctccagtacatgcagtcgctgctgcccagctcc
tttgaattatcaggtcatgtgtttctggctccgagggaatactgcaagcgtctgcacatc
tctgacaacaacacccagtttttgcagaacttcctttcgctcatgttggacatgtctcca
gaatctgatgagtgtgaccaaggcctcatccacaacctgattctggattctaggattatc
gggcagctggcttctcgtgtgtggaagaacaaggacctgaattcgtacggcttcctggcg
gtgtttgcgtctacagatggaggaataacacgggttttccccaacatagctgctgagatg
tgggaggaggatcctgaaccttttaattccaattactacagacgaagcctggacaacaga
ggatacatgttcagagctccaccgagatcctctgtggacgaccctctaggtgcagaaaat
agtacggttggaatcctggttagttcagcagtagaggtgaatctagggggcaaactgctc
aagcctgcagtggttggagtgaagctggacttggaagcgtgggtcgacaagtttaagatc
ctggccagcaacgtgtcggacagtcgacagggttcacacaagtgtggaccatccagaagt
tgcgagatggactgtgaagtcaacactgatgacctcctctgttatctccttgatgatgga
gggttcctggtcatgtccaatcagagagatcactggaaaaagatcggacttttcttcggc
gacgtggacccttatctgatgcacgcgctctacaacaactcaatcttctcccgtcgtcag
tcttttcactaccagtctgcgtgtgaaccagtcagcagcagccacaccggtgcagcaccc
agaggcatctttgtgccgtccattgctgacatgctcagcctggcctggtggacgtccact
gtggcatggtctgtgctccagcagctactgtatggactggcctataacagctggctctat
caagacaacatcctcactgaaggcttcgagaccagagaaagcagctgtgtcaccatccaa
agccagttttactttacaaacaccaccaactcctacaacgtgctgcaggactgtggaaac
tgctcacgtctgttccatgcaaagcggatagaaaacaccaacctgctgtttgtcgtcgct
gagactctgccctgcagctcctgcgagatagagagactgacccaggtcaggacagagttt
caggaggagaatccgtgtgaagtactgagtaatgcacggtatcgtaaaggcccggtttcc
tgctttgactacagtgccttagaaaacacgtcagagtgtggacggggtcattctctgcag
tcctccataggagtccttctctttattcagcttctcctgcctctctttcatctctga
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