Hippoglossus stenolepis (Pacific halibut): 118105527
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Entry
118105527 CDS
T08308
Symbol
cacna2d3
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04010
MAPK signaling pathway
hsp04260
Cardiac muscle contraction
hsp04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118105527 (cacna2d3)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
118105527 (cacna2d3)
04261 Adrenergic signaling in cardiomyocytes
118105527 (cacna2d3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsp04040
]
118105527 (cacna2d3)
Ion channels [BR:
hsp04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
118105527 (cacna2d3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
VWA
VWA_3
dCache_1
VWA_2
MCP-like_PDC_1
WAK_assoc
zf-C4pol
VWA_CoxE
dCache_2
Motif
Other DBs
NCBI-GeneID:
118105527
NCBI-ProteinID:
XP_035009288
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Position
3:14711752..14745715
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AA seq
1167 aa
AA seq
DB search
MKMLGNWRSISSHMCSSSLPLLWIFVGLNVVEVAGSQQGIPLSVVKLWASAFGGEIKSIS
AKYSGSQLLQKELWAITAPRPGTNSSSEAIASGKGSSRINSKSSTACLGGWEESGTPRGN
PRKHGESIQTAFRKRLQGPNLGPPCSEKYKELEKSVRVEEIDGVKLVKNLALKMEEMFRK
KAEATRRLVEAAEEAHHQHEDNPDLQYEYFNAVLINEVDEEGNNVELGAEFLLEPNDHFN
NLSVNLSLSVVQVPTNMYNKDPDIVNGVYWSEALNRVFVDNFERDPTLIWQYFGSAKGFF
RQYPGVKWHPDEHGVIGFDCRNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIARQTVSS
ILDTLGDDDFFNIIAYNQEIHYVEPCLNGTLVRADRTNKDHFREHLDKLFAKGIGLLGEA
LTEAFTILSDFNQTGRGSLCSQAIMLVTDGATQMYDNVFERHNWPERKVRIFPYLIGRES
AFADNLKWMACANKGYFSQISTLADVQENVMRYLHVMSRPKVIDHEHDTVWTEAYVDSAL
SQAHKLKDKAGPSLMTTVAMPVFSTKNETRNQGILLGVAGTDIPLQELMKLIPKHMLGIH
GYAFAITNNGYILTHPDLRPLYQVGQKRRKPNYSSVDLSEVEWEDKDDILRNAMVNRRTG
TFSMEVKKTVDRGRRVLKMHNDYYYTDIKGTPFSVGVALSRGHGKFFFRGNVSVEAGLRD
LEQPDVALADEWNYCNTEEQHEHRHLTQIQAIKLFLTGRRPHLKCDRELIQEVLFDAVVT
APLEAYWTGLALNKSENSDKGVEITFLGTRTGLSRTNLFVPADQLSSQDFLTAEDKEGVF
NADHFPLWYKRAAEQVPGTFIYSIPFSTALENKSVVLASTAIQLLDDRKSPIVAAVGIQM
KLEYFQRKFWTACRQCTALDGKCSISCDNEDINCYLIDNNGFILVTEEHSQTGLFFGEVE
GAVMNKLLQMGSFKRITLFDYQAQCKEYAGSSDSARTLSDPFTVVKWLLTELVIFLLEFN
LYSWWNVDLTVKAQRSRGKTMMVPCDTEYPAFVSERTIKETTGNIDCEGCIRSFVIQQIP
SSNLFMVVVDNKCDCSSSPPVTMDPIEIMYNESLKCDRLKFQKDRKKPESCHPFHPEENA
MECGSATRLSSALTAALLPLIAAAVSR
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgctggggaactggaggagcatttcctcccacatgtgcagcagcagcctccct
cttctctggatcttcgtcggcttgaatgtggtggaggtggcggggtcccagcaaggaatc
cccctgtcagtggtaaagctctgggcctcagcgtttggtggagaaattaaatcaatttct
gcaaaatattctggatcccagttactgcagaaggagctatgggccatcacagcgccacgt
cctgggaccaactccagctctgaggccatcgcctccgggaagggcagcagcaggattaat
tctaaaagctccactgcatgtcttggagggtgggaggaaagcggaacgcccagaggaaat
ccacgcaaacatggggagagcattcaaacagcgtttagaaaacggctccagggtccaaac
ctgggacctccctgctctgagaaatataaagaattggagaagtctgtccgagtggaagaa
atcgatggagtgaagctggtcaaaaatctggctctgaagatggaggagatgttccgcaaa
aaagcagaggccaccaggcggctggtggaggcggcagaggaagcgcaccatcaacacgag
gacaatccggacctgcagtatgaatacttcaacgctgtgctgatcaacgaggtggacgag
gaaggtaacaacgtggagctcggcgcagagttcctcctggagcccaacgaccatttcaat
aacctgtcggtcaacctgagcctcagcgtggtgcaggtgcccaccaacatgtacaacaaa
gatcctgacatagtgaacggagtttactggtccgaggccttgaatagagtgtttgttgat
aattttgagagagaccccacgctcatctggcagtactttgggagcgccaagggtttcttc
aggcagtaccctggagtgaagtggcatccagatgaacacggcgtcatcggcttcgactgc
agaaatcgaaagtggtatatccaggcagcaacgtctccaaaggatgtggttatcttagtg
gatgttagtggaagtatgaaaggtctgaggctgaccattgccagacagaccgtctcctcc
atattagacactctgggagatgacgacttcttcaacataattgcatataatcaggagatt
cactatgtggagccttgtttgaatggaacgctggtgcgggccgaccgaaccaataaagac
catttccgtgaacatctggacaagctgtttgccaaagggattgggctgctgggcgaagct
ctgaccgaagcgttcacaatcctgagtgatttcaatcagactggtcgtggcagcttgtgc
agccaggccataatgctggtgaccgacggggcgactcaaatgtacgacaacgtttttgag
aggcacaactggccagaaagaaaggtgcggatcttcccctacctgatcggacgagagtcg
gcgttcgctgataacctgaaatggatggcttgtgccaacaaaggatatttcagtcagatc
tccaccttagcagacgttcaggagaacgtgatgaggtaccttcacgtcatgagtcgacca
aaggttatcgatcacgagcacgacacagtgtggactgaagcgtatgtggacagtgctctc
tcacaggctcataaattgaaagacaaagcaggcccgagtctaatgaccacagtagccatg
ccagtcttcagcacaaagaatgaaacgaggaaccagggtattctgttgggggtcgcagga
acagacatccctctgcaggagctgatgaagctcatccccaaacatatgttagggatccac
gggtacgcgtttgccatcacgaacaacggctacatcctgacccatccggacctcaggcct
ctgtatcaggtgggtcagaagaggcggaagccaaactacagcagcgtggatctttctgag
gtggagtgggaggacaaagacgacattctacgtaacgctatggtgaacaggaggacaggg
acgttctctatggaggtgaagaagacagtggacagagggaggcgcgtcctgaaaatgcac
aatgactattactacactgacattaaaggaactccattcagtgtcggagtggctctgtcc
agaggccatggcaagttcttcttcagaggaaatgtgtcagtcgaagcagggctccgtgat
ctggaacagccagatgtcgccctggcagatgaatggaactactgcaacacagaggagcag
catgagcatcgtcacctcacccagattcaagccatcaagctcttcttgacgggtcgcaga
ccacacctcaaatgtgacagggagctgatccaggaggttttatttgatgcggtggtgact
gctccactggaggcctactggactggactggccctcaacaagtcagagaactcagacaaa
ggagtggagatcaccttcctgggaacgcgcaccggcctgtcgaggaccaacctgtttgtc
cctgcagatcagctctccagtcaagatttcctgacagcggaggacaaggagggtgtgttt
aatgctgatcacttccctctgtggtacaagagagcagcagagcaggtccccggcacgttc
atctactccatccccttcagcacagctttagagaataagagcgtggttttggccagcaca
gcaattcagctgctcgatgacagaaagtctccaattgttgcagctgtcgggattcagatg
aagctggagtactttcagaggaagttctggacagcctgcagacagtgtacagctctggat
ggaaaatgtagcattagctgcgacaatgaggacattaactgttatctcatcgacaacaat
ggattcattctggtcacagaggagcactctcagacagggcttttctttggagaggtggag
ggggccgttatgaacaaacttctccagatggggtccttcaaaaggatcacgctgtttgac
taccaggcccaatgcaaagagtacgctgggagcagcgacagtgcacgtactttatctgac
cctttcactgtggttaagtggctcctgactgaacttgtcatttttctgctagaatttaac
ttgtacagttggtggaacgtggacctgacagtaaaagctcagaggtctcggggtaaaacc
atgatggttccatgtgacaccgaatatcctgcttttgtctctgaacgcaccatcaaagaa
acaacaggcaacatcgactgtgagggctgcatcaggtcttttgtcatacagcagattccc
agcagcaacctcttcatggttgtcgtggacaataagtgtgactgcagcagttctcctcca
gtgaccatggatcccatcgagatcatgtacaacgagtccctgaaatgtgacagactgaag
tttcagaaggacagaaagaaacctgaatcctgtcatccgttccaccctgaggaaaatgcc
atggagtgtggttcagcaacacgcctctccagtgccctaacagcggctctgctccctctg
atagcagcggccgtcagcaggtga
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integrated database retrieval system