Hippoglossus stenolepis (Pacific halibut): 118105576
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Entry
118105576 CDS
T08308
Symbol
irx5a
Name
(RefSeq) iroquois-class homeodomain protein IRX-5a isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118105576 (irx5a)
Transcription factors [BR:
hsp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
118105576 (irx5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PGA2
Motif
Other DBs
NCBI-GeneID:
118105576
NCBI-ProteinID:
XP_035009309
LinkDB
All DBs
Position
1:complement(22800657..22804591)
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AA seq
457 aa
AA seq
DB search
MAYPQGYLYQPSASLALYSCPAYSTSVLSGPRTEELGRSSSGSAFAPYAGSTAFTSGSPG
YSSHLPYSADAAAAATFTSYVVSKLKGSPYDHTTGMAGSLGYHPYASPLGTYPYGDPAYR
KNATRDATATLKAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKM
TWTPRNRSEDEEEDENIDLEKNDDDEPNKPTDKGESTDTEADHKLLNPGDIGCDRFKEES
HGKDTEPLLSDSELKEQEERTTDLLPDSAKPTTSSPSAVPRGNPSVAQQDKPTDLSHAPG
SVTSNVTSVIHSPPSAPKPKLWSLAEIATSSDRCKSSSDAPQTCPGLAQSSVMGTGASSS
RSSPQCPHPNSTVLSRPLYYTSPFYPGYTNYGGSFGHLHSNHGSVSTGSTAHFNGLNQTV
LNRAEALVRESQKVRGQTQVDLCKDSPYELKKGMSNI
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatcctcagggctacttgtaccagccgtccgcttccctggccctgtactcgtgc
cctgcgtacagcaccagcgttttgtccggacccagaaccgaggaacttgggagatcctcc
tcgggatctgcttttgcgccctatgccggatctactgcgttcaccagcggctcgccaggc
tacagctcccacctaccgtacagtgcagacgcggcggcagcggccacattcacctcgtac
gtggtgagtaaactaaagggttctccctacgaccacaccacgggtatggccggctcatta
ggataccacccttacgcatcgcccttgggcacctacccttacggtgacccggcgtaccgt
aaaaacgcgacccgggacgccacggccaccctgaaggcctggctcagcgagcaccgcaag
aacccctaccccaccaagggcgagaagatcatgctggccatcatcaccaagatgaccctc
acccaggtgtccacctggttcgccaacgccaggaggaggctaaagaaggagaacaagatg
acgtggaccccgcggaaccgcagcgaggacgaggaggaggacgagaacatcgatttggag
aaaaacgacgacgacgagcccaacaagcccacggacaagggagaatccacagacacggaa
gcagatcacaaactgctgaacccaggggacattggctgtgacaggtttaaagaggagagc
catggcaaagacacggaaccccttctgagcgactcggagttaaaagagcaggaggagcgg
actacagacttgctgccggattccgcaaaaccgaccacatcgtcgccctccgcggtgccc
cgggggaacccgagcgttgcgcaacaagacaagccgacagacctgagccacgcaccgggc
tcggtgaccagcaacgtgacctccgtgatccactcgcccccttcggcccctaaacccaaa
ctgtggtccctggcggagatcgccacgtcctcggacagatgtaaaagcagcagcgacgcg
ccacagacctgtcccggtttggctcagagctcggtgatgggcaccggcgcgtcctcctcg
cggtcctccccccagtgcccgcaccccaacagcacggtcctctccaggcctctgtactac
acctcccctttctaccccggctacacgaactatggcggcagctttggacaccttcacagt
aaccacggctcggtgagcacgggctccacggcacatttcaatggattaaaccagactgtg
ttaaatagagcagaggctttggtgagagagagccagaaagtcagaggccaaacgcaggta
gatctttgtaaagactccccttatgaactaaagaaaggtatgtcaaacatttaa
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