Hippoglossus stenolepis (Pacific halibut): 118105696
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Entry
118105696 CDS
T08308
Symbol
igsf5b
Name
(RefSeq) immunoglobulin superfamily member 5 isoform X1
KO
K06786
junctional adhesion molecule 4
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04517
IgSF CAM signaling
hsp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118105696 (igsf5b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
118105696 (igsf5b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hsp04515
]
118105696 (igsf5b)
Cell adhesion molecules [BR:
hsp04515
]
Immunoglobulin superfamily
CTX family
118105696 (igsf5b)
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Paralog
GFIT
Motif
Pfam:
C2-set_3
Ig_3
C2-set_2
I-set
ig
C1-set
Ig_2
ATP1G1_PLM_MAT8
TMEM154
RL10_C
Motif
Other DBs
NCBI-GeneID:
118105696
NCBI-ProteinID:
XP_035009365
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All DBs
Position
4:13418885..13438571
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AA seq
360 aa
AA seq
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MMVLHLLVLLLSCGIQAAGAQMKLYPETLTVLRGEEGRFTCSASNTKWTVMLWLLNGTAA
VTISKLHGVLQSPITNVTAEPVSGSKRDSWVFVLNSTERYNQGQVTCDLQGIDRKTANLF
VQEKGIVKVSGDDKLAFKGKSVIFECRAAGWYPEPSLYWQVNDKKVSQAEYNISSEESGK
SLFTVSSNLSVMAAKSSEVDCLVSVSALTTPLKSSVRLTVVAEVVQEDDDCTVPLAVTAS
LSALLLLLLLGICIVLCYRQRRQANPSPKEPSWFDQSVVGRGLVAEVTRGTDNLGYSKEG
PTDADYNELIMEIRRQMDFASFHKVPDVVYFSSPSLHSESQGPASTSEENPVNVRRITTV
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcttcatctgttggtgctgctactttcctgcgggattcaagcagctggagct
cagatgaagctgtacccagaaacactgactgtcctgcgaggggaggaggggaggtttacc
tgcagcgcctccaacaccaagtggaccgtgatgttgtggctgctgaacggcacagcggcg
gtcaccatctcgaagttgcacggtgtcctgcagtcccccatcactaatgtgacagctgag
ccagtctccggctccaagagagacagctgggtgtttgtcctgaacagcacagagaggtac
aaccagggacaagtgacctgtgaccttcagggcatcgacaggaaaacagcaaacctgttc
gtacaagaaaagggcatcgtcaaagtctcgggggacgacaagttggctttcaaggggaag
tcagtgatatttgaatgccgagcagcaggatggtatcctgaacccagtctgtactggcag
gtgaatgacaagaaggtgagccaggctgaatacaacatcagcagtgaagagtcggggaag
agcctcttcactgtgagcagcaacctcagtgtgatggcggcaaagagctctgaagtggat
tgtctggtctccgtgtctgccctcaccacgccactgaagagcagcgtccgtctgacagtg
gttgcagaggtggtgcaggaagatgatgactgcacggtcccgctggcagtgactgcctcc
ctctctgctcttctgctgctcctcctgctcggcatctgcattgtcctctgctacagacag
aggagacaagcaaatccaagcccaaaggagccttcatggttcgaccaatcggtggttggg
agaggactggttgctgaggtgacaagagggactgataacctgggatactctaaagagggt
cccacagacgcagattacaatgagctaatcatggaaattcgtagacagatggactttgcc
agttttcacaaggtccctgatgtcgtgtacttcagcagcccgtctctgcacagtgagagc
caaggcccggcgagtacgtcagaggaaaaccctgtgaacgtcaggaggattaccacagtt
tga
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