Hippoglossus stenolepis (Pacific halibut): 118105875
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Entry
118105875 CDS
T08308
Symbol
smc4
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsp03036
]
118105875 (smc4)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
118105875 (smc4)
Condensin II
118105875 (smc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
TPR_MLP1_2
AAA_29
CCDC113_CCDC96_CC
Oxidored_nitro
ABC_tran
Motif
Other DBs
NCBI-GeneID:
118105875
NCBI-ProteinID:
XP_035009754
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All DBs
Position
4:10235309..10254212
Genome browser
AA seq
1304 aa
AA seq
DB search
MKRFQTMPSKTAKGSTASAKPRGKGSQPRDDSEDELDVPPQATRSNGKEEAPPTTGPSLG
EAAEAADNRGLEEILGSIPPPPPPAMTNEPGAPRLMITHLVNRNFKSYAGEQILGPFHKR
FSCIIGPNGSGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHSSDKHKDVQSCTVEVHFQKI
TDKEGDDYEVIPNSKFYVSRTANKDNSSVYHINGKKATFKEVGALLRGHGIDLDHNRFLI
LQGEVEQIAMMKPKGQTEHDEGMLEYLEDIIGSCRLKEPIQTLARRIELLNEQRGEKLNR
VKLVEKEKNALEGERNKAVEFLTLENDIFKHKSQLCQYYVHDLHKRVVDKEQEKQKILED
TKELTEKNTKISQEMEKMNQELKNVEKKQNKLNKYIETQKEKFTQLDLQDVEVREKIKHS
KSKNKKLQKQLEKDKEKLEEVRGVPASSEKAISEATVSKEEQEKQKMKEEEKLKEVMESL
KEETSGLQQDKETKEKELMGLSKAVNETRSRMDIAQSELDIYLSRHNTALTQLNTAKQTL
QTTSDTLRERRAAIKDLEVKIPQKEQELKKDEGELEQLMKMDNDTREVVREMRQKVDEAK
SSLSSNRSRGKVLDALMQQKKRGVIPGIFGRLGDLGAIEEKFDVAISSSCGALDNILVDT
IDTAQKCVTFLKEQNIGVATFIGLDKMKVWERNMAPIRTPEDCPRLFDMVQVKDQSVRPA
FYFALRDTLVAQDMDQATRMAFQKDKRWRVVTLRGQIIEMAGTMTGGGRAMKGRMGSSLG
TEVSQEELDRMESKLSEKVSKLQGCQERKLQLEENIQRLRPQLRDMKNTLEKYAKSMTSL
ADQETHLKRQMKELEANVIAAAPDKAKQKQMEKSLDAFKKDFEAASSKAGKVENEVKRLH
NLIVDINSHKLKAQQDKLDKVNKELDDCSSTITKAQVAIKTAGRNLKKCEETVSRVQLEL
EENGKSMAEFTEQLKKLEEEAGEVMMACQEAEAELPEVQEQYQGVLKEIKVLQQQEHALQ
EESLSVRLRIEQIETTITEHNNKIKHWQKEASKLSLHTIEDKPAEELPVLTPADLEEISN
PNVIINKMMRSETQCAQMKPNLGAIAEYKKKEELYLQRVAQLDEITTERDQFKRGYEELR
KQRLNEFMTGFNMITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKI
FNLSGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALDFKNVSIVACYIYEQTKNAQFII
ISLRNNMFEIADRLIGIYKTHNTTKSVGINPKTIVFKEHDAVTA
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagatttcaaaccatgccatctaaaactgcaaagggctccactgcctccgccaag
cccagagggaaagggtcgcagcctcgggatgactccgaggacgagctggatgtaccccca
caagcaacccgctccaatggcaaagaggaggcaccgccgacaactggtccgtctctcggt
gaggctgccgaggcggctgataatcgaggtttggaggagattctcggtagcatccctcca
cccccgcccccagcaatgaccaatgaaccgggcgctcctcgcctgatgataacacattta
gtcaatcgcaactttaaatcgtacgcaggcgagcagattctggggccttttcacaagcgc
ttttcctgcatcattggtccgaatggaagtgggaagtccaatgtgatagattcaatgctc
tttgtgtttggatacagagctcaaaagatcagatcgaaaaagctctcggtgctgattcac
agctctgataaacacaaagatgtccaaagctgtactgtggaggtgcattttcaaaagatc
actgataaggaaggagatgactacgaagttattcccaacagcaagttctatgtttccagg
actgccaacaaagacaattcctcagtctaccatatcaatggcaagaaagccacatttaaa
gaagtgggggctttactccgaggccacggtattgacctagaccacaacagatttctgatc
ttacagggtgaggtggagcagattgctatgatgaagcctaaaggtcagacagagcatgat
gagggcatgctggagtacctggaggacattattggctcctgccgcctgaaggagcccatc
caaaccctggcccgtcgcattgagctgctcaatgagcagaggggagagaagctaaaccga
gtgaagctcgtggaaaaggagaagaatgcattggagggagaaagaaacaaagctgtggag
ttcctcactctggagaatgacattttcaaacacaagagtcagctttgccaatattatgtt
catgatctgcacaagcgtgtagtggacaaagagcaggaaaagcagaagatcctggaggac
acaaaggaactgactgagaaaaatacaaagatttcacaggagatggagaaaatgaaccaa
gagctcaaaaatgtagagaagaaacaaaataagctcaacaagtacattgagacccagaag
gagaagttcacccagctggacctgcaggatgttgaagtgcgtgagaagattaaacactcc
aagagcaagaacaagaaactgcagaagcagctggaaaaggacaaagaaaagctggaggaa
gtgcgcggtgtaccagccagcagtgaaaaggccatctctgaggcaactgttagcaaggaa
gagcaggagaagcagaagatgaaagaagaggaaaaacttaaggaggtcatggagagtctg
aaagaagagaccagtggcttgcagcaggacaaagagaccaaagagaaagagctgatggga
ctcagtaaggctgtaaatgagacacgttcccgtatggacattgctcaatcggaactcgac
atctaccttagccgccacaacacagctttgacacagctcaacacggccaagcaaactctc
caaaccacctcggatactctgcgagagcgccgcgctgccatcaaagatttagaagtcaaa
ataccccagaaagagcaggagctcaagaaggacgagggagagttggagcagctgatgaag
atggataatgacaccagagaagtggtgagggaaatgaggcagaaggtggatgaggccaag
agctctctgtcgtccaaccgcagtcgaggaaaggtcctggatgcgctcatgcagcagaag
aagaggggtgtaatccctggcatctttggaagattgggagacctcggagccatagaagag
aagttcgatgtggccatctcctctagctgtggtgctctggacaacattctggtggatacc
atcgacacagctcagaaatgtgtcacatttctcaaagaacagaacattggggtcgccacc
ttcattggtctcgacaagatgaaggtgtgggagaggaacatggctcccattcgtactcca
gaggactgtcctcgtctctttgacatggtccaagtgaaagatcagagcgtgcgtccagct
ttctactttgccctcagggacacgctggtggcccaggacatggaccaagccacgagaatg
gccttccagaaggacaagcgctggagagtggtcaccctgaggggacagatcattgagatg
gctggtaccatgactggaggaggaagagcgatgaagggcaggatgggctcttctcttggc
accgaggtctcccaggaggagctcgatcgtatggagagtaagctgagcgagaaagtgtca
aagctgcagggctgccaagagagaaagctgcagctcgaggagaacatccagcgcctccgg
ccgcagctccgggacatgaagaacaccctggaaaaatacgccaaaagcatgactagtctt
gctgaccaggagactcacctgaaacgtcagatgaaggagcttgaggctaacgtgatcgca
gccgccccggacaaggccaagcagaagcagatggagaagagtctggatgctttcaagaaa
gacttcgaggcagcttctagtaaagctggaaaagtggaaaatgaggtgaagaggctccac
aacctgattgtagacatcaacagccacaagctaaaggctcagcaggacaagcttgacaag
gtcaacaaggagctggacgactgctcctccaccatcaccaaggcccaagtagccattaag
acagctggccgcaacctgaagaagtgtgaggagactgtgagtcgtgtgcagcttgagctg
gaggagaacgggaagtcaatggccgagttcacagaacaactgaagaagctggaagaggag
gctggggaggtcatgatggcctgtcaggaggcggaggcggagcttcccgaggtgcaggag
cagtatcagggggtgctgaaggagatcaaggttctgcagcagcaggagcacgctctgcag
gaggagtccctcagcgtccggctccgcatcgagcagatcgagacgaccatcaccgaacac
aacaacaagatcaaacactggcagaaagaggccagcaagttgtcccttcacacgattgaa
gacaaaccagcagaggaacttcctgttctcactcctgccgaccttgaagaaatctctaat
cccaatgtcatcatcaacaagatgatgaggtcagagacgcagtgcgctcagatgaagcca
aacctcggcgccatcgctgagtacaagaagaaggaggagctgtacctgcagcgagtggct
cagctggacgagatcacgaccgagagggaccaattcaagcgcggctacgaggagctgcgc
aaacagcgactcaacgagttcatgaccggattcaacatgatcacaaacaagctgaaggag
aactaccagatgctaacgctgggcggggacgcagagctggagctggtcgacagcttagat
cccttttctgagggcatcatgttcagtgttcgtcctccaaagaagagctggaaaaagatc
tttaacctgtcgggaggagagaagacgctgagctctttggctctggtgtttgctctgcac
cactacaaacccacaccgctctacttcatggacgagatagatgctgctcttgatttcaag
aacgtctccattgttgcctgttacatttatgaacaaacaaagaacgctcagttcatcatc
atctctctgaggaacaacatgttcgagatcgcagatcgcctcatcggcatctacaaaact
cacaacaccaccaagagcgtgggaatcaaccccaagaccatcgtgttcaaggagcatgat
gccgtcactgcttaa
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