Hippoglossus stenolepis (Pacific halibut): 118105878
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Entry
118105878 CDS
T08308
Symbol
trim59
Name
(RefSeq) tripartite motif-containing protein 59
KO
K12028
tripartite motif-containing protein 59
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118105878 (trim59)
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118105878 (trim59)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
TRAF3_RING
zf-RING_10
BAR_3_WASP_bdg
zf-RING_6
Lipoprotein_20
Spectrin
MgrB
Motif
Other DBs
NCBI-GeneID:
118105878
NCBI-ProteinID:
XP_035009758
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Position
4:complement(10255292..10260712)
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AA seq
417 aa
AA seq
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MDNLEEDLTCSVCYSLFTDPRVLACSHTFCKACLDNLLRASTNYSIWRPLRQPLKCPNCR
SVMELPVTGVDALPTNVSLRAIIEKYQSDCDPRPPSCPEHSRQPLNMYCIQDRQLICGLC
LTVGQHQGHPIDDLQAAFIREKQTPSLLLTSLSGQRWAQMCELAEQLEQEKARCEALVRQ
DRQEVNQFFQTLKAVLAKKRQAYLEALDKAGAEISRAYDPLIHRVKEIQEKQLDLVSLGS
SVEEEESPLVFLEKVHLLREGVEEFLKTPLPPVINVSVTPRAADYLQQRWPAVTIGSLEE
APVPKVSCCGRCGGGEADSPVQELWCKPSCSVVLLGLLGLLLLLAALWLDPVGGASLGFS
LLSRFSQLVHGLSSELATSVWDSALSACTVMEAAVESWSTQLSSAWEKAFQQFCCII
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggacaacctcgaggaggacctgacctgctccgtgtgctactctctgttcactgaccct
cgagtgctggcgtgctctcacaccttctgtaaggcctgcctggacaacttgctccgggcg
tccacaaactattccatctggcgtccgctccgtcagccgctaaaatgccccaactgtcgc
agcgtgatggagctgcccgtgaccggcgtcgacgctctgcccaccaacgtgtctctccgg
gccatcatcgagaaataccagagtgactgtgatccccgacctccgtcctgtccggagcac
agcaggcagcctctgaatatgtactgcatccaggatcgccagctgatctgtgggctgtgc
ctgaccgtcgggcagcaccagggtcatcccatagacgacctgcaggcggctttcatcaga
gagaaacagacgccatcgctgctgctgaccagtctctctgggcagagatgggcacagatg
tgtgagctcgcggagcagctggagcaggagaaggctcgctgcgaggctctggtgaggcag
gaccgacaggaagtgaatcagttttttcagacgctgaaggcggtgttggccaagaagaga
caagcgtacctggaggcgctggataaagctggtgctgagatttcccgggcctacgacccg
ctcatccacagagtgaaggaaatacaggagaaacagctggacctggtgtctttgggctcg
tcggtggaggaggaggagtcgccgctggtcttcctggagaaggtgcatctgctcagagag
ggggtcgaggagtttctgaagacccctctccccccagtgatcaacgtcagcgtcaccccc
cgcgcagcagactaccttcagcagcgctggcctgctgtgaccatcgggagcctggaggaa
gcacctgtccctaaggtgagctgctgtggcagatgtggcggcggggaggccgacagcccg
gtacaggagctgtggtgcaaacccagttgttctgtggtgctgctggggctgctggggctg
ctgctgctgctggcggcgctgtggttggacccagtgggaggcgcctcgctcggcttctct
ctgttgtctcggttcagtcagttagtccacggcctgagcagcgaactcgccacatctgtc
tgggactcggcgctgtcggcatgcacagtgatggaggcggctgtggagagttggagcaca
cagctgtcctcggcctgggagaaggctttccagcagttttgctgcattatttaa
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