Hippoglossus stenolepis (Pacific halibut): 118105907
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Entry
118105907 CDS
T08308
Name
(RefSeq) protein Smaug homolog 2
KO
K27396
protein Smaug
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118105907
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
118105907
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Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
118105907
NCBI-ProteinID:
XP_035009820
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Position
4:8348218..8359765
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AA seq
671 aa
AA seq
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MMFRDQVGILTDWFKGWNECEQTVALLSLLKRVSRTQARFLHICLEHWLADCTEIHILEA
EANNAAIVSQWHQEPKEKVVSLLLSHLPLLQPRNSEAKCEYMKLLQKVLSHTIESSLFVE
ESRQLLSYALIHPATTLDDRTSLAMWLNHLEEHLSSGYAPRPPSSPYHPRQGSDEWPSSA
EALDPGLAWHDKSPSSSTSPAGQNGHMSFPGGMSSPINSNNTGLGGQMQPSPLKKSMSVI
PSSPQACGSEWVSQDDMRQNFMPTDHAPLSPQSSVASSGSEQTEEQGSARNTFQEDGSGM
KDVPGWLKSLRLHKYASLFSQMNYDEMMILTEHHLESQNVTKGARHKIALSIQKLRERQS
VLKSLEKDILEGGNLRNALQELQQIVTTPIKAYIPPSATQPTLETASSPSEASKTGADKE
PVSEGFQSHNPPPCDGDSTATPISDGDIAGQFTRVMGKVCTQLLVSRPDEENISCYLQLI
EKCLTHEAFTETQKKRLVSWKQQVLKLLRLFPRKAMLDMPVYRQKGWTYGSNSLPTAGSV
SGVVGRRGQRPFQMTPRGLPAGRISLLSPGGIGGASPRHTLTNPVLAGQGRQNLWFANPG
GSNSMPSQSRSTVQRTHSLPVHTSPQTMLMFQQQECQVPGADLEINPTLESLCLSMTEHA
LGDGTDRTSTI
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgagaccaagtaggtatcctcacagattggtttaaaggctggaatgagtgt
gaacagacggtggcactgttgtccctcctgaagagggtgtcccgcacccaggctcgcttc
ttacacatctgccttgaacactggctggcagactgcacagagatccacatccttgaggct
gaggccaacaatgcagcgattgtcagccagtggcaccaggagccaaaagagaaagtggtt
tccttgctgctgtctcatctgcctctgctgcagccacgcaacagcgaggccaaatgtgag
tacatgaagctgctgcagaaggtgttgagtcacaccattgagagtagcctgtttgtggaa
gaaagcagacagctgctttcctatgctctcatccaccctgcgaccacactggatgaccgt
acctctctggccatgtggctaaaccacctggaggaacacctatcaagtggctacgcgcct
cggcctccatccagtccctaccacccacgccagggctcagatgagtggcccagctcagct
gaggctctggaccctggccttgcttggcacgacaagtccccatcatccagcacatctcct
gcaggccagaacggacacatgtcattcccaggcgggatgtcttctcccatcaacagcaat
aacacaggtctgggtgggcagatgcagcccagccctctgaagaagtccatgtccgttatt
ccttccagtccccaggcttgtggctctgagtgggttagccaggatgacatgcgacagaac
tttatgccaacagatcatgcacctctttcaccccaaagcagtgtcgcctcctcaggcagc
gagcagacagaagaacagggctccgctcgcaacactttccaggaggatggcagtggcatg
aaagatgttccagggtggctgaaaagtctccgccttcataaatatgcatcgcttttctcc
cagatgaactatgacgagatgatgattctcacagagcaccaccttgagtcacagaatgtc
actaaaggagcacggcataagattgccttgagtatccagaaactgcgagagaggcagagt
gtgctcaagtctttggaaaaggatattttggaaggggggaaccttcgtaacgcccttcag
gagctgcagcagatcgtcaccacacccattaaggcctacatcccacccagtgcaacacag
cctaccttagaaaccgcctcctccccttcagaagcctcaaaaacaggagcagataaagag
ccagtctcagagggcttccagtcccacaacccacccccctgcgatggagactccacagcc
acacctatctcagacggcgacattgctggacagttcacccgtgtcatgggcaaagtgtgc
acccagctgctggtgtccaggccagatgaggagaatatcagctgttaccttcagctcatc
gagaagtgtctaacacatgaggcttttacagaaactcagaagaagaggctggtctcctgg
aagcagcaggtcctcaaattgctccgcctcttccctcggaaagctatgctggacatgcct
gtgtaccgacagaaaggttggacgtatgggtccaactccctccccacagccggctctgtg
agtggagttgtaggccgacgagggcaaaggccgttccagatgacccctcgtggactccca
gctggtcgcataagtcttctgagtcctggtgggattggcggagcatctccacgccacaca
ctcactaatcctgtgctggcaggccagggtagacaaaacctgtggtttgccaaccctggg
ggcagtaacagcatgccaagtcagagtcgcagcactgtgcagcggacccactcactccct
gtccacacttccccacaaaccatgctcatgttccagcagcaagaatgccaagttccaggt
gctgacctggagatcaaccccacgctggagtcattgtgcctcagtatgacagagcatgcc
ttaggggatggaacagaccggacatcaacaatatga
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