Hippoglossus stenolepis (Pacific halibut): 118105909
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Entry
118105909 CDS
T08308
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118105909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118105909
Membrane trafficking [BR:
hsp04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
118105909
Endosome - Golgi transport
Arf GTPase associated proteins
118105909
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
118105909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
ArfGap
SAM_1
RA
SAM_2
PH_11
PH_6
PH_8
PH_3
PH_9
Motif
Other DBs
NCBI-GeneID:
118105909
NCBI-ProteinID:
XP_035009824
LinkDB
All DBs
Position
4:complement(16186912..16234204)
Genome browser
AA seq
1603 aa
AA seq
DB search
MSQSECCADVWDWLCVLRLEQYSEAFRNAGLATLRQCRNLTPDQLERMGITLPGHQRRIL
ASLNKTHGNRDTQSDTHSQPLMSEREQQSEETGHAKVLHRERPVPLPVEEKPIFKQTERE
DGETSKPTPREREKPVPKERQVSRMKEENEGGGKKSVPEQRQTAPGQSKAEEGDGGVDGD
REKPVPKERTKFRSSAPVDCPPGPRVSPMSDPPLPPVPPRSTPNCPPQCFTSALSPSPPA
RTPVSPKLDRRDVTAPAAPSVSRCLTPTRTPTHTSTQTRPQTLAIQPAAQHLVIDGGRKM
SPVSPIAPQSHDRNAPPLPPKAGGVPKGPPPIRQRVPAQSPRAHSASPTKTVTDEMQKDQ
TPQVPPRIRTPQTQENAQHSTQPDAQLRVSRPSCEFSQNSLDDSSDEYEDPDFINPIVNS
MKTPERDMSLQVPGGIKGRYNSFCSDDEQLDDEDSSQWHDSGLSTVQGSVYLPATGRRAS
ACQEDSSQHAAVIKMGWLDKNPPQGALYYQRRWVKLDVDYLRYFENDKDVYSKGIISTAY
ITNVTSVGELKFEVATNNRTFIFRAESEAERNDWVTVLQDCNRGRHRRNTMSPGSLLTPD
YQGYLELKGLRSKLYTVIASDKVYLYKHIDDFRIGVGITSIEMNVGNVKDSERRNFDLTT
PYRIFSFIAESDQLREQWVDAMRNAIGEALSNSEVADRIWVESSNSVCADCGTPKPEWAA
INLCVVICKRCAGEHRGLGPSISKVRSLKMDRKVWTEELIQVFLLLGNERVNSFWAANIP
PSEALMPSSCSEERRRFITNKYRQGKYRKYHPLYGNQRELNNALCINVQCTDVLETLSLI
FCGADVNCSTGVASWPSPLTLANAHSQLLQAELLSHNLNTELPQSHVDGAMEAVHYSAPP
CVSHNGFLFKTASMARAISERKGKEEFSRRWCVLNDGTFSYYESDKNSNPNGALKASEIV
CLAVDAPEKHGYENTFELYSESERLYLFGTDDPDGHKEWVKSIARNFIPASAEPLLRLGF
ERIGRLKCKDGLNLQTSKVGWFALVGSTLHAHLENGQGEEIHLRKLNELSIQQDNEVLVL
VEKGRTLYIEGERKLDFSGWCTAIQTAAGSGGDTLGQQQLTETDIPVIVHSCIGYITQCG
LTSEGIYRKSGVNSRVAALLERFRRDARSVHLREGEHQVDDVSNTLKRFFRELEEGLFTS
EDASTWLSTAAIQDESKKISQYQLLLDSLPRVNKATLQALINHLYCVQRFSELNQMNLHN
LAIVFGPTLFQTDGKDYTAGRAIEELIEHYTLIFEVDEQQLKKQLEEITVIIQVREKLST
KFPSTEPGGHFICTVYLEEKKNTAEQHVKIPGSMTAAELTCEVLDRRNIPVKDKEYWSCW
EVSNKEEMERPLHYLERVLPILHSFGTDSHLLIKKHLAMEAMILYLTSKVDASKHGMMKF
REERSILGLGLTSGSFHDRYFILNSNSLRMYKEVRSNRPERDWPVKNLKVYLGIKKKVRP
PTCWGLTVVCESVKQERPERQQWYLCCDTQTEMREWFATFLSIQYDGNVWPQDGLKLTRV
SRVLPDTRHGNVSLIPLRGSENEMRNSVAAFSQDALALFRDVR
NT seq
4812 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagtctgagtgctgtgcagatgtgtgggactggttatgtgtacttcgtctggag
caatactctgaggcatttcggaacgccgggctggcaacattgcggcagtgtcgcaacctc
acaccagatcagctggagcgaatgggcatcaccctgccgggtcaccagagacgcatcctg
gccagcttgaacaaaacacatggtaatcgtgacacacaatctgacacgcacagtcagcct
ctaatgtctgagagggagcagcaatctgaggaaacaggacatgctaaagtgttacacaga
gagagacctgtacctctccctgtggaggaaaaacctatctttaagcaaacggagagagaa
gatggagagacatcgaaacctactcccagagaaagagagaaaccagtccctaaggagaga
caagtgtccagaatgaaagaggaaaatgaaggaggagggaagaagtcggttcctgaacaa
agacaaacagcacctggacaaagcaaagcagaagagggggacggaggggtagatggagac
agggagaaacctgtgcctaaagagaggactaagtttcgctctagtgctccagtggactgc
ccccccggccctcgtgtctctccaatgtctgacccccctttaccccctgtccccccacgt
agcacccccaactgccctccacagtgctttacgtctgccctgagcccctcacctcctgct
cgtacccccgtctcccctaaactagacagacgtgatgttacagctccagctgcaccgagc
gtgtcccgctgtttaacccccaccagaacccctacccatacttctacacaaacccggcca
cagacattagccattcagccggctgcccaacatctggtaatcgatggagggagaaaaatg
tcacctgtttctcccattgctcctcaaagccacgacagaaatgctcctcctctccctcca
aaagcggggggagtacctaaaggccctccaccaatccggcagagggttcctgcacagtct
cccagagctcacagtgcctctcctaccaagacagtcacagatgagatgcagaaagaccaa
actccccaggtcccccctcgaataaggacaccccaaactcaagaaaacgcacaacattca
actcaacctgacgctcagctgagggtctccagaccttcctgtgaattcagtcaaaactca
cttgatgatagctctgatgaatatgaggatccagacttcattaaccccattgttaatagc
atgaaaacaccagagagggatatgtccctgcaagtacctggtggaataaaggggcggtac
aattctttttgcagtgatgatgagcaattggatgatgaggattcttcccaatggcatgac
agtggcctcagtaccgtacaaggcagtgtttacctgcctgccactggcagacgggcttca
gcctgtcaagaagacagctctcagcacgctgccgtcatcaagatgggctggctggacaag
aatccacctcagggagccctttattaccagcgacgatgggtaaaactggatgttgactac
ctgagatactttgaaaatgacaaggacgtttattccaaggggatcatctcaacagcctac
attactaatgtgaccagtgtgggagagctcaagtttgaggtcgccacaaacaaccgaaca
tttatcttcagggctgaaagcgaagctgagagaaatgactgggtgactgtactacaggac
tgcaacagggggcgccatcgccgcaacaccatgagccctggctcgcttttgaccccagac
tatcagggctatttggagctcaaagggttgcgctccaaactttacactgtcatcgcctca
gataaggtctacctctacaaacacatagacgactttcgtattggagttggtatcacatcc
attgagatgaatgtaggaaatgttaaagactctgaacgtcgtaactttgatctcacgaca
ccctaccgcatattcagtttcatagcagagtccgatcagctgagggagcagtgggtggac
gccatgcggaatgccataggtgaggcgttgtccaatagcgaggtggcggaccggatctgg
gtggagtcaagcaacagtgtctgcgctgactgtgggactcccaagccggaatgggcggcc
atcaacttgtgcgtggtgatctgcaaacgatgcgcaggagagcacagaggactgggtcct
agcatctccaaggtccgtagtctaaagatggacaggaaagtctggacagaggagcttata
caggtgttccttttgcttggcaacgagcgggtaaacagtttctgggcagccaacatccca
ccaagcgaggccttgatgccctccagctgcagtgaagaaaggcgacgtttcatcaccaac
aaataccgccagggaaaatacagaaagtaccaccccctgtatggaaaccagagagagctc
aacaatgctctgtgtataaatgtgcagtgcactgatgtgctcgagacattaagcctgatc
ttctgcggggccgatgtaaattgttcaactggtgtggcaagttggccctcccctctcacg
ctggccaacgcacactcccaactcttacaggctgagttactcagccacaatctcaacaca
gagctgccacaatcacatgtggacggggccatggaggcggtacattactcagcaccaccc
tgtgtgtctcacaatggcttcctattcaaaactgcatccatggctcgggctatctcggaa
cgaaagggcaaagaagagttcagtcgccgatggtgtgtgttgaatgatggcaccttcagc
tactatgagagtgacaagaactcgaaccccaacggagctctgaaagcttcagagattgtc
tgcttggctgtcgacgcacctgaaaaacatgggtatgaaaatacctttgaactctactct
gagtcagagcgtctctatctgtttggcactgatgatccagatggccacaaagaatgggtc
aagtctattgccaggaactttatcccagcctctgcagagcctttgctgaggcttggtttt
gagcggattgggcggctgaagtgtaaagacggcttgaacctgcaaacgtcaaaagttggt
tggtttgctctggtgggctccacactccacgcccatctggagaatggccagggggaggag
atccaccttcgtaaacttaatgaactctccatccaacaagacaacgaagtgctggtactg
gtggagaaaggcagaactctgtacatagagggagagaggaagttggattttagcggctgg
tgcacggccatccagacggcagcagggagcggaggagacacgctgggccagcagcagctc
acagagacggacataccggtcatcgttcacagctgcatcggctacatcactcagtgcggc
ttgacatctgagggaatctatcgtaagagcggtgtgaactcgcgggtggcagcgctgtta
gagagatttcgccgtgatgctcgcagtgttcatctcagggaaggagagcaccaggtggac
gacgtctccaacacactcaagcgtttcttcagggagttagaagaaggactgttcacctca
gaggatgccagcacctggctcagtacagctgccattcaggatgaaagtaagaaaatctcc
cagtaccagctgttgttggacagtctgcctcgcgttaacaaggctacactacaagctctt
atcaaccacctctactgcgtgcaacgtttttctgagctgaaccaaatgaacctccacaac
ctggccatagtgtttggtcccacactgttccagacggatgggaaggactacactgctggc
cgcgccatagaggagcttatagagcactacacgctcatctttgaggtggatgagcagcag
ctaaagaagcagctggaggagatcactgttatcatccaagtgcgagagaaactaagcaca
aagtttcccagcactgagcctggaggacatttcatctgcacagtgtacctggaggaaaaa
aagaacacagcagagcaacatgttaagatccctggttctatgacggcagcagagttgaca
tgtgaggttctggaccggcgcaacatccccgttaaagacaaggagtattggagctgctgg
gaggtcagcaacaaggaggaaatggagcgtcctctgcactacctggagcgagtcttaccc
atccttcactcctttggcaccgactcccatctgctcattaagaagcaccttgctatggaa
gccatgatcctctacctgacaagtaaagtggacgcatccaaacacgggatgatgaaattc
agagaggagcgaagcatcctgggattgggactgacctctggaagtttccatgaccgatat
ttcatcctcaactccaactcgctcaggatgtacaaggaagtccggagtaaccgcccagaa
cgtgactggcctgtgaagaatctcaaggtttacttaggcatcaagaagaaagtccgtcct
cccacttgttggggcctaacagtggtgtgtgagagtgtgaaacaagagaggccggagagg
cagcagtggtatctctgctgtgacacccagacagaaatgagggagtggttcgctactttt
ctcagtattcagtacgatggcaacgtgtggcctcaggacggactcaagctgacgcgggtg
agccgcgtgttgccggacacgcgtcatggtaacgtgtcactgataccgctgcgtggcagt
gagaatgagatgcggaacagcgtagcagctttcagccaagacgcgcttgctctctttaga
gatgttcgataa
DBGET
integrated database retrieval system
