Hippoglossus stenolepis (Pacific halibut): 118105933
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Entry
118105933 CDS
T08308
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118105933 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118105933 (dhx36)
03012 Translation factors [BR:
hsp03012
]
118105933 (dhx36)
Enzymes [BR:
hsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
118105933 (dhx36)
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
118105933 (dhx36)
Translation factors [BR:
hsp03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
118105933 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
AAA_22
nSTAND3
ATPase
AAA_19
NB-ARC
AAA_21
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
118105933
NCBI-ProteinID:
XP_035009879
LinkDB
All DBs
Position
4:9658120..9679992
Genome browser
AA seq
1093 aa
AA seq
DB search
MSYGYGGGGGGGGGRRGRRGGRGHRDGSRERWDRDGGGGGGFRGSRSDCDQGRGRGGRGG
GGGEGEEGGEGGGHRDRPPPHLKGREIGMWYARYGAVRRKQADRRSRAVVQMDEAREEHI
TKLLNSVQNDHPGQERGSRGARASTSDNWQTDADRSSHCYFDGELPKEVKQEIDSTSEEE
EEEVSSGQKKAANKKHRNLTPAVAKDETPDTWDDDEPQEEEKEEKEKLRHRDKDVEFLFQ
EKVRDSSLDDFLQRDLQSKKSDPKYKEMLKFREKLPSYRKKEELVELINSSRVLVVSGET
GCGKTTQVTQFILDDYINRGVGSMCRVVCTQPRRISAISVAERVSAERAESVGNGNSSGY
QIRLQSRLPRKQGSILYCTTGIILQWLHSDPLLSSISHLVLDEIHERNLQSDVLLIIVKD
LLALRDDLNVILMSATLNAEKFSKYFDNCPMVHIPGSTFPVEEFLLEDILEMTRYRPQNQ
DRRPSWKRGFWQGQNSRPEKEEKEAEYKDSWPCYERTLQNRYSENTISTVEMLDGNDKID
LELILTLIRHIVLNDEEGAILVFLPGWDNISTLNDLLMAQQMFRSDRFVIIPLHSLMPTV
NQTQVFKRPPPGVRKIVIATNIAETSITIEDVVYVIDGGKIKETNFDTNNNISTMTAEWV
SLANAKQRKGRAGRVRPGKCYHLYNGLRASLLDAYQLPEIMRTPLEELCLQIKILKLGSI
ARFLEKAPDPPTERAISLAIKNLVDLNALDHSENLTALGFHLARLPVEPHIGKLILFGAL
LGCLDPVLTIAASLSFKDPFFIPLGKEKMADMRRRTLSRNSKSDHLTIVNAFQGWEEAKR
RGVRYEKEFCWENFLSANTLQMLHNMKGQFAEHLMHAGFVSSKDPRDPKSNVNSDNEKLI
KAVIAAGLYPKVAMIKPSHSKKRPGVKVYTQADGKVNIHPKSVNAEETEFNYKWLVYHLK
MRTSSIFLYDCTEVSPFSLLFFGGDITIQKDEGQETIAVDKWIVFSSPARIAHLVKSLKK
ELDSLLEEKIRNPAPVDWQNRQSKDCAVISAIIDLITTQEKPIGGTKSYSRPWASAPRGP
HIHFNDDDDDDDD
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgagttatggatacggtggtggtggaggtggtggtggtggaaggagaggccgaagagga
ggccgagggcaccgggacgggagcagagaaaggtgggacagagatggaggaggaggagga
ggtttcagaggatccagatccgactgtgaccaggggcgaggaagaggaggaagaggagga
ggaggaggagaaggagaagaaggaggagaaggaggtggacaccgggaccgtcctcctcca
catctgaagggccgtgagatcgggatgtggtacgcgagatacggagccgtgaggaggaaa
caggccgacaggagatcgcgagcggtggtccagatggatgaggccagagaggagcacatt
accaagctgctaaattctgtccagaatgaccaccctggtcaggagagaggcagcagggga
gcaagagcctctacgtctgataattggcaaacagatgccgacagaagtagtcactgttac
tttgatggagaattgcccaaagaggtaaaacaggagatagattccacatctgaggaggag
gaagaagaggtcagttcgggccagaagaaagcggctaacaagaaacatcgtaacttaact
ccagcagtcgccaaagatgaaactccagacacatgggatgatgacgagccccaggaagag
gagaaggaggagaaagagaaactgagacacagagacaaggatgtagaattcttattccaa
gaaaaagtccgagatagttcactggacgatttcttacagagagatctgcagagcaagaaa
tcagatccaaagtacaaagaaatgctgaaattcagggaaaaactaccttcttaccggaaa
aaagaggagctggtggagctgatcaactctagccgtgtcctggttgtgagtggggagacg
ggctgtggaaagaccacgcaagtcacccaattcatcctggatgactacatcaacagaggc
gtgggatcgatgtgccgggtcgtgtgcacgcagcctcgtcgcatcagtgccatctctgta
gcagagcgtgtatcagcagagagggctgaaagtgtagggaatggaaattcttctggttac
caaatccgcctacagagccggttaccacggaaacaaggttcgatcctgtactgtacaact
ggcatcattcttcagtggcttcactcagaccccttgttgtccagcatcagtcacctggtg
cttgacgagatccacgagaggaacctgcagtcggacgttttgctcatcatcgtgaaggac
ctgctcgccctccgggatgatctcaacgtcatcctcatgagtgccacgctcaacgcagag
aagttttccaaatactttgacaactgtccaatggttcacatccccggttcaactttccca
gtggaagagttcctacttgaggacattttagagatgaccaggtaccgcccccagaatcag
gaccgtcggccctcatggaagagaggcttttggcaggggcagaactcccgacctgagaag
gaggagaaagaggcagaatacaaggacagttggccttgctatgaacgcacactgcagaac
agatactctgaaaacacgatttctacagtagagatgttggacggtaatgacaagattgac
ctggagcttatcttgacactgatccgtcacattgtgctcaacgatgaggaaggagcgatc
ctggttttcctcccaggctgggacaacatcagcactctcaatgacctgctcatggctcag
cagatgttcagatcagaccggttcgttatcatccccctgcactccctcatgcccaccgta
aatcagacgcaggtgttcaaaaggcctcctcctggagttagaaagatagtgattgccacc
aacatagcagagaccagcatcaccatagaggatgttgtatatgtgattgatggaggaaag
atcaaggagaccaactttgacaccaacaacaacatcagcaccatgacggccgagtgggtc
agcctggccaacgccaaacagaggaaaggacgcgccggcagagtgcgcccggggaagtgc
tatcatctgtacaacggtctcagggccagcctgctggacgcctatcaattacccgaaatt
atgaggacaccgctggaggagctgtgcctgcagattaagatattgaagctcgggtctata
gctcgattcctggagaaagcccccgacccacccactgagagggccatcagtctggccatc
aagaacctcgtggacttgaatgccctggaccactcggagaacctgacagcgctgggtttc
cacctggctcgtctgcccgtggagcctcacatcggcaaactgatcctgttcggagctctg
ttgggctgcctcgaccccgtgctcaccatcgccgcctcgctcagcttcaaagaccctttc
ttcatacccctgggtaaagagaagatggcagacatgaggagaaggaccctgtccagaaac
tcaaagagtgaccacctcaccattgtcaacgccttccagggctgggaggaagccaaacgc
cgcggtgtcaggtatgagaaggagttctgctgggaaaacttcctgtcagccaacactctt
cagatgctgcacaacatgaagggtcagtttgctgagcatctgatgcatgcaggctttgtc
agcagcaaggaccccagagaccccaaatctaatgtcaactcggacaatgagaagttaatc
aaagcggtgattgccgcaggtctgtacccgaaggtggccatgatcaaaccatcgcacagc
aaaaagaggccgggggttaaggtctacacccaggctgatggaaaggtgaatatccacccg
aagtcggtcaacgccgaagagacagagttcaactacaagtggctcgtctaccacctcaag
atgagaacgagcagcatcttcctgtacgactgcaccgaagtgtccccgttctcgctgctg
tttttcggaggcgacatcacaatccagaaggacgagggccaggagaccatcgctgtggac
aagtggatcgtcttcagttccccggcacgaatcgctcaccttgtcaagagtttaaagaag
gagttggattctctactggaggagaagatccgtaaccctgcgcctgtggactggcagaac
cgtcagtccaaagactgcgctgtcatctcggccatcatagatctcatcaccacccaagag
aagcctataggcggcactaagagctatagcagaccgtgggcgtcggcccctagagggcca
catattcacttcaatgacgatgacgacgacgacgatgattag
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